iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.60e-09	36.7	1342	1389

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C+ Cg+ ++++  ++ C+ C+ w+H+ C++++   ++ n++ w+C+ C  
   Q: 1342 ICPACGKVDDGS-AMIGCDGCDAWYHWICVGIT-FAPKDNDD-WFCRVCVT 1389
           588888888876.7*******************.88888886.******75 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MMADRYASDL ALVVVAQITQ TIGYSCTLSA PLELLQDILQ KFVQEFARDM HRHMEHANRI 60
EPNLKDARLS IKNLSINVQE LLDYIGNVEP VGFIRDVPQF PIGKSVNMNF LKPGSAETLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTATCGTT AACTAAACAT CCACAGATTG TAGTTCGTCT AATAAAGGTG TAGACACCAA 60
GTCAATTAAT TTTAATAACA AGAGGAAGTT CGTGGGACGG TTAAACCTAT TCACAGCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR006565--BTP
IPR009072--Histone-fold
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF07524--Bromo_TP
PF00628--PHD

SMART

SM00576--BTP
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0002039--F:p53 binding
GO:0031208--F:POZ domain binding
GO:0008134--F:transcription factor binding
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter

KEGG

dme:Dmel_CG2009

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003831	Anas platyrhynchos	65.00	2.00e-22	100.00
IUUC-Bta-012541	Bos taurus	36.64	8.00e-24	105.00
IUUC-Cel-018700	Caenorhabditis elegans	49.15	2.00e-14	73.90
IUUC-Cja-019753	Callithrix jacchus	64.81	6.00e-21	95.50
IUUC-Cfa-021153	Canis familiaris	36.64	6.00e-24	105.00
IUUC-Cpo-022178	Cavia porcellus	37.40	3.00e-24	106.00
IUUC-Csa-023797	Chlorocebus sabaeus	37.40	4.00e-24	106.00
IUUC-Cho-024357	Choloepus hoffmanni	63.33	2.00e-20	93.60
IUUC-Cin-025173	Ciona intestinalis	63.64	1.00e-20	91.30
IUUC-Csv-026292	Ciona savignyi	63.64	5.00e-22	97.40
IUUC-Dno-029644	Dasypus novemcinctus	62.30	1.00e-21	97.80
IUUC-Eeu-034542	Erinaceus europaeus	65.00	8.00e-22	98.60
IUUC-Fca-035867	Felis catus	58.21	3.00e-21	96.30
IUUC-Fal-037442	Ficedula albicollis	63.33	7.00e-22	98.60
IUUC-Fox-038014	Fusarium oxysporum	38.78	4.00e-07	50.10
IUUC-Gga-041093	Gallus gallus	38.17	7.00e-25	108.00
IUUC-Gac-041347	Gasterosteus aculeatus	35.11	2.00e-22	100.00
IUUC-Hsa-047012	Homo sapiens	37.40	3.00e-24	106.00
IUUC-Itr-048120	Ictidomys tridecemlineatus	36.64	7.00e-24	105.00
IUUC-Kpa-049206	Komagataella pastoris	36.73	2.00e-04	40.40
IUUC-Lch-049593	Latimeria chalumnae	68.42	5.00e-22	99.00
IUUC-Loc-052228	Lepisosteus oculatus	63.33	2.00e-19	88.20
IUUC-Laf-054492	Loxodonta africana	37.40	3.00e-24	106.00
IUUC-Mcc-054754	Macaca mulatta	37.40	4.00e-24	106.00
IUUC-Mmr-061146	Microcebus murinus	36.64	5.00e-24	105.00
IUUC-Mdo-062034	Monodelphis domestica	37.40	2.00e-24	107.00
IUUC-Mmu-063928	Mus musculus	38.17	2.00e-24	107.00
IUUC-Mpu-066634	Mustela putorius furo	36.64	6.00e-24	105.00
IUUC-Mlu-067116	Myotis lucifugus	63.33	5.00e-22	99.00
IUUC-Nle-069177	Nomascus leucogenys	37.40	2.00e-24	107.00
IUUC-Opr-070692	Ochotona princeps	37.40	2.00e-23	104.00
IUUC-Oan-073680	Ornithorhynchus anatinus	63.33	1.00e-21	97.80
IUUC-Ocu-074944	Oryctolagus cuniculus	36.64	6.00e-24	105.00
IUUC-Oga-088122	Otolemur garnettii	35.62	5.00e-25	108.00
IUUC-Oar-089568	Ovis aries	63.33	2.00e-21	97.10
IUUC-Ptr-090531	Pan troglodytes	37.40	3.00e-24	106.00
IUUC-Pan-092733	Papio anubis	37.40	3.00e-24	106.00
IUUC-Psi-093411	Pelodiscus sinensis	66.07	1.00e-21	97.80
IUUC-Pma-094511	Petromyzon marinus	64.81	1.00e-21	97.80
IUUC-Pfo-096336	Poecilia formosa	37.98	2.00e-23	103.00
IUUC-Pab-098458	Pongo abelii	37.40	2.00e-24	107.00
IUUC-Pva-102128	Pteropus vampyrus	36.64	4.00e-24	106.00
IUUC-Rno-105180	Rattus norvegicus	38.17	1.00e-24	108.00
IUUC-Sha-107070	Sarcophilus harrisii	64.81	9.00e-21	94.70
IUUC-Ssc-115657	Sus scrofa	66.67	5.00e-23	102.00
IUUC-Tgu-117228	Taeniopygia guttata	38.33	1.00e-22	101.00
IUUC-Tru-117787	Takifugu rubripes	38.17	4.00e-26	112.00
IUUC-Tni-119879	Tetraodon nigroviridis	37.40	4.00e-25	109.00
IUUC-Tbe-127747	Tupaia belangeri	36.64	4.00e-24	106.00
IUUC-Ttr-128397	Tursiops truncatus	36.64	1.00e-23	103.00
IUUC-Xtr-132570	Xenopus tropicalis	38.76	7.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence