iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116770

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01022175

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000008063.1	ENSTGUT00000008411.1	ENSTGUP00000008324.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-47	156.5	141	175
UBD/Beta-Prp	8.80e-77	258.0	6	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           +Ht++v+c +f +d ++++s++ D++i +WD+r  
   Q: 141  QHTGWVRCAKFsPDgRIIASCGEDKSINIWDTRNK 175
           5***********99999**************9865 PP

UBD/Beta-Prp

   S: 41   tgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcl 129
           ++ l+r + gh+a+vt v f+ ++  +vt+s D ++ +w l+t +  + ++gh + v+s++fsp+g++l+s+shd t+r+w ++     
   Q: 6    DPVLIRPFRGHTAAVTGVAFNANAAGMVTCSVDTLLILWKLNTQCRAYRFSGHAEAVTSVDFSPDGQVLASASHDHTVRLW-IPCIHGE 93
           66789999*************************************************************************.4444444 PP
   S: 130  eetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           +++l+gh+++v++v+++ dg+++vs+s+D+ v++W++  ++ll tl + ht+ v++ +f+++g+ ++s+++d+++++wd +++ cv+++
   Q: 94   SSVLKGHTASVRSVSFSHDGCYVVSASNDKLVKVWSVCYQRLLFTLFQ-HTGWVRCAKFSPDGRIIASCGEDKSINIWDTRNKICVNRF 181
           449*******************************************87.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
            +++++++ v+f p ++ ++s++s  ++++Wd+r+++ll+ ++ h+
   Q: 182  SDYEEFPTFVDFNPSGTCIASAGSNSTVKLWDVRTNKLLQHFKVHR 227
           *******************************************997 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

PSPQEDPVLI RPFRGHTAAV TGVAFNANAA GMVTCSVDTL LILWKLNTQC RAYRFSGHAE 60
AVTSVDFSPD GQVLASASHD HTVRLWIPCI HGESSVLKGH TASVRSVSFS HDGCYVVSAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTCTCCCC AGGAGGACCC CGTCCTGATC CGGCCTTTCC GCGGCCACAC GGCGGCGGTG 60
ACGGGCGTCG CCTTCAACGC GAACGCGGCA GGGATGGGTG AGTGCGGGGC CGGGCGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002219	Ailuropoda melanoleuca	54.22	6.00e-131	460.00
IUUC-Apl-004219	Anas platyrhynchos	69.35	1.00e-168	585.00
IUUC-Aca-005197	Anolis carolinensis	56.33	3.00e-151	527.00
IUUC-Ame-011000	Astyanax mexicanus	48.03	3.00e-130	457.00
IUUC-Bta-012706	Bos taurus	54.98	1.00e-142	499.00
IUUC-Cja-019185	Callithrix jacchus	54.83	3.00e-130	457.00
IUUC-Cfa-021274	Canis familiaris	54.07	1.00e-140	492.00
IUUC-Cpo-022351	Cavia porcellus	54.30	7.00e-140	489.00
IUUC-Csa-023032	Chlorocebus sabaeus	56.22	5.00e-140	490.00
IUUC-Cho-024508	Choloepus hoffmanni	49.88	2.00e-105	375.00
IUUC-Dre-028703	Danio rerio	49.36	7.00e-130	456.00
IUUC-Dno-028915	Dasypus novemcinctus	55.61	3.00e-137	481.00
IUUC-Ete-032353	Echinops telfairi	45.69	4.00e-109	387.00
IUUC-Eca-034136	Equus caballus	55.28	3.00e-133	468.00
IUUC-Eeu-034611	Erinaceus europaeus	52.11	2.00e-101	362.00
IUUC-Fca-036205	Felis catus	52.61	6.00e-127	446.00
IUUC-Fal-036947	Ficedula albicollis	78.77	0.00e+00	664.00
IUUC-Gga-040847	Gallus gallus	71.24	0.00e+00	638.00
IUUC-Ggo-045194	Gorilla gorilla	55.00	3.00e-142	497.00
IUUC-Hsa-047026	Homo sapiens	55.44	3.00e-142	498.00
IUUC-Itr-048943	Ictidomys tridecemlineatus	53.79	2.00e-131	462.00
IUUC-Lch-050067	Latimeria chalumnae	52.71	1.00e-141	496.00
IUUC-Loc-052409	Lepisosteus oculatus	51.17	7.00e-135	473.00
IUUC-Laf-053428	Loxodonta africana	55.27	7.00e-144	503.00
IUUC-Mcc-054772	Macaca mulatta	55.86	2.00e-144	505.00
IUUC-Meu-056496	Macropus eugenii	53.87	1.00e-105	376.00
IUUC-Mga-059276	Meleagris gallopavo	64.15	8.00e-175	606.00
IUUC-Mmr-061525	Microcebus murinus	55.37	4.00e-142	497.00
IUUC-Mdo-062351	Monodelphis domestica	50.80	5.00e-139	487.00
IUUC-Mmu-063834	Mus musculus	50.84	8.00e-132	463.00
IUUC-Mpu-066453	Mustela putorius furo	53.70	6.00e-138	483.00
IUUC-Mlu-067909	Myotis lucifugus	55.28	2.00e-131	461.00
IUUC-Nle-069206	Nomascus leucogenys	54.79	1.00e-142	498.00
IUUC-Oan-073726	Ornithorhynchus anatinus	56.15	4.00e-137	480.00
IUUC-Ocu-074639	Oryctolagus cuniculus	54.49	7.00e-144	503.00
IUUC-Ola-086913	Oryzias latipes	48.72	4.00e-123	434.00
IUUC-Oga-088061	Otolemur garnettii	62.97	9.00e-128	449.00
IUUC-Oar-090228	Ovis aries	52.58	9.00e-141	493.00
IUUC-Ptr-091420	Pan troglodytes	55.21	1.00e-142	499.00
IUUC-Pan-092228	Papio anubis	55.65	5.00e-144	503.00
IUUC-Psi-093309	Pelodiscus sinensis	65.09	8.00e-171	592.00
IUUC-Pab-098109	Pongo abelii	55.00	2.00e-142	498.00
IUUC-Pva-102712	Pteropus vampyrus	55.16	3.00e-142	498.00
IUUC-Rno-105260	Rattus norvegicus	50.96	1.00e-131	462.00
IUUC-Sar-113446	Sorex araneus	48.95	1.00e-121	429.00
IUUC-Ssc-115794	Sus scrofa	63.27	7.00e-129	453.00
IUUC-Tru-117968	Takifugu rubripes	48.31	2.00e-121	429.00
IUUC-Tsy-119316	Tarsius syrichta	48.31	9.00e-107	379.00
IUUC-Tni-119953	Tetraodon nigroviridis	47.31	2.00e-114	405.00
IUUC-Tbe-128071	Tupaia belangeri	50.56	8.00e-116	410.00
IUUC-Ttr-129267	Tursiops truncatus	54.15	6.00e-140	490.00
IUUC-Vpa-130823	Vicugna pacos	56.76	7.00e-108	383.00
IUUC-Xtr-131768	Xenopus tropicalis	50.64	8.00e-135	473.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence