iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111077

Ensembl Protein ID

Solyc08g068810.2.1

UniProt Accession

K4CMA3; K4CMA3_SOLLC

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g068810.2	Solyc08g068810.2.1	Solyc08g068810.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.20e-80	271.1	182	519

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           Gl+NlgNtC+mNSvLQ+L++ p+lr+++l+ ++++++ ++  +++  +l + +  +f+++ +++++ +sp ++l + ++ +e+  +yeqqD
   Q: 182  GLNNLGNTCFMNSVLQVLLHAPPLRNYFLSdRHNREICRN-MSSDRLCLPCDIDLMFSAVFSGDRTPYSPAQFLYSWWQHSENHATYEQQD 271
           9*****************************7677777655.5899********************************************** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp..... 177
           a+Ef+  +ld+++++  k                   +   k++++ +++ ++ F g l+s+++c +c+ +s++++p +d+sl+++     
   Q: 272  AHEFFISMLDKIHDKEGK------------------ASLAIKDNRECQCIAHRAFYGLLRSDVTCASCGFTSTTHDPCMDVSLDLSpcnss 344
           ***************922..................12234678999***************************************55555 PP
   S: 178  .gkeetkke..........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpl 257
                              sl  cL+ ft++e+l +++k+yce+c++kq+a k+++++klP vL++h+kRf+ s ++k+++ki+++v+fp 
   Q: 345  rV------DfasksskaneSLLGCLDLFTRPEKLGSDQKLYCENCHEKQDALKQMSIRKLPLVLCFHIKRFEHSPTRKMSRKIDRHVQFPF 429
           50......35555555555************************************************************************ PP
   S: 258  eLdlspfcts..............peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlf 334
           +Ld++p+++s              + +++++++++e++avv HsG l+sGHYv+y     ++W+++dD  +tev+ee v     s+ Y+ +
   Q: 430  SLDMKPYLSSsivrerygsrifsfDGDESDVSTEFEIFAVVAHSGMLESGHYVTYLHL-INQWYKCDDAWITEVDEEVVRA---SQCYLIY 516
           **********8888888888888844445559************************99.888*****************99...******* PP
   S: 335  Ykr 337
           Y +
   Q: 517  YVQ 519
           *76 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MYSSNDLYTN PKPCKHLAEY KVKNGVCGYN LIQDCFRTTP YGRTTLEMSK LEIPRCSVCS 60
GSQGRFYMCL ICSSVFCCLS PESNHALLHI QSQDGHEILV DMERAELYCS VCCDQVYDPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCACAGCT CTCTGTTTCC ATTAGTATCT GACCCCAATT TTTTTAAAAA AAAAATTCTG 60
TTAGGGATTT TAGATCAACC CATTAATTTA AATTCTTACT GTGATATTTG TATAATTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sly:101268016

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	53.64	2.00e-109	389.00
IUUC-Aml-002084	Ailuropoda melanoleuca	37.08	1.00e-88	319.00
IUUC-Atr-002653	Amborella trichopoda	59.96	0.00e+00	654.00
IUUC-Apl-003433	Anas platyrhynchos	37.53	4.00e-84	304.00
IUUC-Aca-005347	Anolis carolinensis	35.77	2.00e-85	309.00
IUUC-Aly-006565	Arabidopsis lyrata	54.83	1.00e-155	542.00
IUUC-Ath-007536	Arabidopsis thaliana	54.64	3.00e-156	544.00
IUUC-Ago-007811	Ashbya gossypii	27.85	1.00e-43	169.00
IUUC-Acl-008124	Aspergillus clavatus	33.55	3.00e-61	228.00
IUUC-Afl-008464	Aspergillus flavus	33.41	1.00e-54	206.00
IUUC-Afu-008912	Aspergillus fumigatus	31.73	2.00e-56	212.00
IUUC-Ani-009168	Aspergillus nidulans	32.69	7.00e-62	230.00
IUUC-Ang-009694	Aspergillus niger	32.04	3.00e-59	221.00
IUUC-Aor-010035	Aspergillus oryzae	34.88	5.00e-38	150.00
IUUC-Ate-010382	Aspergillus terreus	32.86	6.00e-55	207.00
IUUC-Ame-011253	Astyanax mexicanus	36.65	9.00e-76	276.00
IUUC-Bgr-012150	Blumeria graminis	28.15	2.00e-45	176.00
IUUC-Bta-013303	Bos taurus	37.71	7.00e-90	323.00
IUUC-Bci-013604	Botrytis cinerea	31.58	7.00e-56	210.00
IUUC-Bdi-014171	Brachypodium distachyon	48.75	4.00e-136	477.00
IUUC-Bol-016509	Brassica oleracea	53.79	8.00e-158	550.00
IUUC-Bra-016962	Brassica rapa	54.31	2.00e-146	511.00
IUUC-Cja-019283	Callithrix jacchus	39.86	4.00e-83	301.00
IUUC-Cfa-020956	Canis familiaris	37.84	1.00e-86	313.00
IUUC-Cpo-022354	Cavia porcellus	37.94	1.00e-90	326.00
IUUC-Csa-023145	Chlorocebus sabaeus	37.71	3.00e-90	324.00
IUUC-Cho-024863	Choloepus hoffmanni	30.23	1.00e-22	100.00
IUUC-Cin-025109	Ciona intestinalis	35.48	2.00e-58	218.00
IUUC-Csv-026214	Ciona savignyi	34.16	2.00e-70	259.00
IUUC-Cgl-026457	Colletotrichum gloeosporioides	31.50	5.00e-57	214.00
IUUC-Cne-027085	Cryptococcus neoformans	31.24	2.00e-60	226.00
IUUC-Dre-027433	Danio rerio	38.80	7.00e-86	310.00
IUUC-Dno-030095	Dasypus novemcinctus	38.72	2.00e-86	312.00
IUUC-Dse-031415	Dothistroma septosporum	31.64	4.00e-62	231.00
IUUC-Dme-032074	Drosophila melanogaster	32.58	2.00e-65	242.00
IUUC-Ete-033175	Echinops telfairi	30.67	4.00e-49	188.00
IUUC-Eca-033957	Equus caballus	37.27	5.00e-89	320.00
IUUC-Fca-035768	Felis catus	36.89	4.00e-88	318.00
IUUC-Fal-037645	Ficedula albicollis	37.47	2.00e-83	302.00
IUUC-Fox-038046	Fusarium oxysporum	29.85	2.00e-51	196.00
IUUC-Fso-038321	Fusarium solani	30.72	6.00e-52	197.00
IUUC-Gmo-038474	Gadus morhua	41.28	4.00e-58	218.00
IUUC-Ggr-040044	Gaeumannomyces graminis	30.56	4.00e-53	201.00
IUUC-Gga-040624	Gallus gallus	36.64	4.00e-86	311.00
IUUC-Gac-042197	Gasterosteus aculeatus	36.53	2.00e-84	305.00
IUUC-Gma-043469	Glycine max	61.79	0.00e+00	696.00
IUUC-Ggo-044409	Gorilla gorilla	37.52	9.00e-90	323.00
IUUC-Hsa-046521	Homo sapiens	37.52	9.00e-90	323.00
IUUC-Hvu-047739	Hordeum vulgare	59.17	1.00e-122	432.00
IUUC-Itr-048375	Ictidomys tridecemlineatus	37.90	2.00e-90	325.00
IUUC-Kpa-049135	Komagataella pastoris	34.33	1.00e-64	239.00
IUUC-Lch-050537	Latimeria chalumnae	37.43	5.00e-90	324.00
IUUC-Lpe-050969	Leersia perrieri	59.01	5.00e-123	433.00
IUUC-Loc-052765	Lepisosteus oculatus	34.43	3.00e-71	261.00
IUUC-Lma-053105	Leptosphaeria maculans	31.36	2.00e-56	212.00
IUUC-Laf-053947	Loxodonta africana	37.96	3.00e-89	321.00
IUUC-Mcc-055166	Macaca mulatta	37.71	3.00e-90	324.00
IUUC-Mor-057103	Magnaporthe oryzae	28.48	2.00e-53	202.00
IUUC-Mpo-057621	Magnaporthe poae	29.96	7.00e-52	197.00
IUUC-Mtr-057894	Medicago truncatula	59.46	0.00e+00	670.00
IUUC-Mla-059185	Melampsora laricipopulina	30.04	1.00e-45	176.00
IUUC-Mga-059709	Meleagris gallopavo	37.53	4.00e-84	304.00
IUUC-Mvi-060530	Microbotryum violaceum	31.12	8.00e-53	200.00
IUUC-Mmr-060988	Microcebus murinus	37.90	9.00e-90	323.00
IUUC-Mdo-063065	Monodelphis domestica	37.24	2.00e-89	322.00
IUUC-Mmu-063829	Mus musculus	37.90	3.00e-90	325.00
IUUC-Mac-065419	Musa acuminata	48.73	4.00e-135	474.00
IUUC-Mpu-066433	Mustela putorius furo	37.31	8.00e-89	320.00
IUUC-Mlu-067330	Myotis lucifugus	37.66	2.00e-89	322.00
IUUC-Nfi-068423	Neosartorya fischeri	31.73	6.00e-56	211.00
IUUC-Ncr-068809	Neurospora crassa	29.96	7.00e-55	207.00
IUUC-Nle-069859	Nomascus leucogenys	37.87	5.00e-83	301.00
IUUC-Opr-070469	Ochotona princeps	36.77	1.00e-55	209.00
IUUC-Ont-071961	Oreochromis niloticus	36.36	3.00e-85	308.00
IUUC-Oan-073565	Ornithorhynchus anatinus	35.62	5.00e-80	290.00
IUUC-Ocu-074951	Oryctolagus cuniculus	37.11	3.00e-87	315.00
IUUC-Oba-075688	Oryza barthii	50.27	1.00e-132	465.00
IUUC-Obr-076652	Oryza brachyantha	59.69	2.00e-123	434.00
IUUC-Ogl-077910	Oryza glaberrima	50.36	2.00e-133	468.00
IUUC-Ogu-078479	Oryza glumaepatula	50.36	2.00e-133	468.00
IUUC-Oin-079697	Oryza indica	57.59	6.00e-123	433.00
IUUC-Olo-080811	Oryza longistaminata	57.29	4.00e-88	317.00
IUUC-Ome-081706	Oryza meridionalis	52.29	7.00e-133	467.00
IUUC-Oni-083070	Oryza nivara	48.93	3.00e-133	468.00
IUUC-Opu-083605	Oryza punctata	57.99	1.00e-114	405.00
IUUC-Oru-084522	Oryza rufipogon	50.36	2.00e-133	468.00
IUUC-Osa-085351	Oryza sativa	57.44	2.00e-123	435.00
IUUC-Ola-086743	Oryzias latipes	42.75	1.00e-78	285.00
IUUC-Olu-087695	Ostreococcus lucimarinus	36.87	4.00e-60	224.00
IUUC-Oga-089131	Otolemur garnettii	37.50	2.00e-89	322.00
IUUC-Oar-089610	Ovis aries	38.46	1.00e-86	313.00
IUUC-Ptr-090783	Pan troglodytes	38.72	3.00e-86	311.00
IUUC-Pan-092927	Papio anubis	37.71	4.00e-90	324.00
IUUC-Psi-093670	Pelodiscus sinensis	37.53	4.00e-84	304.00
IUUC-Pma-094323	Petromyzon marinus	36.36	2.00e-67	248.00
IUUC-Pno-095141	Phaeosphaeria nodorum	31.49	1.00e-53	203.00
IUUC-Ppa-095413	Physcomitrella patens	46.77	7.00e-149	520.00
IUUC-Pfo-096473	Poecilia formosa	37.48	3.00e-90	325.00
IUUC-Pab-097612	Pongo abelii	37.71	5.00e-90	324.00
IUUC-Pop-099893	Populus trichocarpa	63.98	0.00e+00	719.00
IUUC-Pca-100329	Procavia capensis	37.77	5.00e-89	320.00
IUUC-Ppe-101583	Prunus persica	65.34	0.00e+00	701.00
IUUC-Pva-102721	Pteropus vampyrus	35.89	4.00e-81	294.00
IUUC-Pgr-103657	Puccinia graminis	28.27	6.00e-37	147.00
IUUC-Pte-104340	Pyrenophora teres	31.59	2.00e-54	205.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	32.50	4.00e-60	224.00
IUUC-Rno-105247	Rattus norvegicus	37.90	2.00e-90	325.00
IUUC-Sce-106247	Saccharomyces cerevisiae	29.21	3.00e-47	181.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	30.87	8.00e-59	220.00
IUUC-Spo-108226	Schizosaccharomyces pombe	31.85	1.00e-60	226.00
IUUC-Ssl-108531	Sclerotinia sclerotiorum	30.78	7.00e-53	201.00
IUUC-Smo-109595	Selaginella moellendorffii	49.45	4.00e-146	510.00
IUUC-Sit-109716	Setaria italica	52.41	9.00e-137	479.00
IUUC-Stu-112203	Solanum tuberosum	94.20	0.00e+00	855.00
IUUC-Sar-113174	Sorex araneus	36.67	4.00e-77	281.00
IUUC-Sbi-114205	Sorghum bicolor	52.39	9.00e-138	483.00
IUUC-Sre-115195	Sporisorium reilianum	29.34	9.00e-29	121.00
IUUC-Ssc-115315	Sus scrofa	37.38	1.00e-87	316.00
IUUC-Tgu-116938	Taeniopygia guttata	38.30	2.00e-86	311.00
IUUC-Tru-118304	Takifugu rubripes	37.11	4.00e-87	314.00
IUUC-Tsy-119413	Tarsius syrichta	36.15	2.00e-80	292.00
IUUC-Tni-120661	Tetraodon nigroviridis	37.22	3.00e-89	321.00
IUUC-Tca-121154	Theobroma cacao	65.05	0.00e+00	748.00
IUUC-Tre-122139	Trichoderma reesei	31.34	1.00e-52	199.00
IUUC-Tvi-122599	Trichoderma virens	30.84	5.00e-54	204.00
IUUC-Tae-125608	Triticum aestivum	50.54	5.00e-146	510.00
IUUC-Tme-127115	Tuber melanosporum	32.18	4.00e-70	258.00
IUUC-Tbe-127423	Tupaia belangeri	30.12	3.00e-23	102.00
IUUC-Ttr-129006	Tursiops truncatus	36.83	7.00e-86	310.00
IUUC-Uma-129455	Ustilago maydis	29.77	1.00e-29	124.00
IUUC-Vda-129829	Verticillium dahliae	32.89	7.00e-37	146.00
IUUC-Vvi-131477	Vitis vinifera	67.20	0.00e+00	687.00
IUUC-Xtr-132444	Xenopus tropicalis	37.04	4.00e-88	317.00
IUUC-Xma-133514	Xiphophorus maculatus	37.62	1.00e-89	322.00
IUUC-Yli-134357	Yarrowia lipolytica	31.08	4.00e-46	178.00
IUUC-Zma-134945	Zea mays	52.71	7.00e-132	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence