iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037382

Ensembl Protein ID

ENSFALP00000010270.1

UniProt Accession

U3K5G6; U3K5G6_FICAL

Genbank Protein ID

ENSFALP00000010270

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000219

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000009842.1	ENSFALT00000010310.1	ENSFALP00000010270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-08	32.6	138	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 138  CPICMDVYseivqsGRLIVSTKCGHVFCSQCL------RDSLRNANSCPTCR 183
           ******9944444433255788*********9......4559*********8 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MSTTQRKRRG GTVNSRQARK RSRLMASTAE MASEAEPIEL EESAGEEVVD LTCESSDPVV 60
VDLTHNDSVV IVEENQRQRR NLRLRSQRQS DSCVLSSDDE DETRDNDVYV ADKASRELGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACAG TAAGTATTTT GCTAGTCAAT GCATAACTGA TTCTTGAACT CTGTTTTCCG 60
TTGTATTTCT GTGAACTATT TTAATACGCA GGAACATAAG TATATTGAAT CTTCTTGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	42.62	5.00e-12	64.30
IUUC-Aml-002206	Ailuropoda melanoleuca	72.40	1.00e-66	245.00
IUUC-Atr-002771	Amborella trichopoda	36.00	2.00e-11	62.40
IUUC-Apl-004120	Anas platyrhynchos	95.41	3.00e-97	346.00
IUUC-Aca-004236	Anolis carolinensis	72.82	5.00e-70	256.00
IUUC-Aly-005728	Arabidopsis lyrata	39.34	2.00e-10	58.20
IUUC-Ath-007366	Arabidopsis thaliana	39.34	2.00e-10	58.50
IUUC-Ame-011555	Astyanax mexicanus	54.32	5.00e-41	159.00
IUUC-Bta-012913	Bos taurus	68.37	1.00e-67	248.00
IUUC-Bdi-014655	Brachypodium distachyon	45.90	5.00e-12	64.30
IUUC-Bol-016418	Brassica oleracea	42.62	2.00e-10	59.70
IUUC-Bra-016890	Brassica rapa	38.60	2.00e-08	52.40
IUUC-Cja-019151	Callithrix jacchus	67.51	2.00e-61	227.00
IUUC-Cfa-020868	Canis familiaris	69.74	4.00e-63	233.00
IUUC-Cpo-022249	Cavia porcellus	68.75	4.00e-59	220.00
IUUC-Csa-024125	Chlorocebus sabaeus	66.84	2.00e-62	231.00
IUUC-Cin-025749	Ciona intestinalis	44.26	4.00e-15	74.30
IUUC-Dre-028145	Danio rerio	46.89	2.00e-37	148.00
IUUC-Dno-029605	Dasypus novemcinctus	69.39	1.00e-69	255.00
IUUC-Dor-030898	Dipodomys ordii	68.88	1.00e-65	242.00
IUUC-Dme-032177	Drosophila melanogaster	52.54	2.00e-13	68.90
IUUC-Ete-032694	Echinops telfairi	64.92	7.00e-54	202.00
IUUC-Eca-033443	Equus caballus	71.94	3.00e-66	244.00
IUUC-Eeu-034603	Erinaceus europaeus	68.22	8.00e-40	154.00
IUUC-Fca-035507	Felis catus	71.20	2.00e-62	231.00
IUUC-Gmo-038960	Gadus morhua	77.55	8.00e-21	92.00
IUUC-Gga-040493	Gallus gallus	85.20	7.00e-90	322.00
IUUC-Gac-042194	Gasterosteus aculeatus	52.98	9.00e-39	152.00
IUUC-Gma-042666	Glycine max	39.34	3.00e-09	54.70
IUUC-Ggo-044726	Gorilla gorilla	67.86	6.00e-63	232.00
IUUC-Hsa-046212	Homo sapiens	67.86	6.00e-63	232.00
IUUC-Hvu-047630	Hordeum vulgare	33.98	2.00e-12	65.90
IUUC-Itr-047892	Ictidomys tridecemlineatus	69.27	4.00e-64	236.00
IUUC-Lpe-050920	Leersia perrieri	40.98	1.00e-11	62.80
IUUC-Loc-051907	Lepisosteus oculatus	49.13	2.00e-37	147.00
IUUC-Laf-054145	Loxodonta africana	70.31	4.00e-62	229.00
IUUC-Mcc-055689	Macaca mulatta	67.35	2.00e-62	231.00
IUUC-Meu-056654	Macropus eugenii	47.64	2.00e-41	161.00
IUUC-Mtr-058314	Medicago truncatula	43.55	2.00e-11	61.60
IUUC-Mga-059303	Meleagris gallopavo	92.35	3.00e-95	340.00
IUUC-Mmr-061355	Microcebus murinus	67.86	6.00e-63	233.00
IUUC-Mdo-062968	Monodelphis domestica	73.58	2.00e-74	270.00
IUUC-Mmu-064421	Mus musculus	68.23	3.00e-70	257.00
IUUC-Mac-064573	Musa acuminata	40.98	1.00e-11	63.90
IUUC-Mpu-066522	Mustela putorius furo	72.40	7.00e-67	246.00
IUUC-Mlu-067065	Myotis lucifugus	69.27	3.00e-63	234.00
IUUC-Nle-069198	Nomascus leucogenys	66.84	6.00e-62	229.00
IUUC-Opr-071141	Ochotona princeps	66.67	6.00e-65	239.00
IUUC-Oan-073341	Ornithorhynchus anatinus	72.00	1.00e-40	158.00
IUUC-Ocu-073787	Oryctolagus cuniculus	69.43	2.00e-71	261.00
IUUC-Oba-075460	Oryza barthii	43.55	2.00e-12	65.50
IUUC-Obr-076406	Oryza brachyantha	32.95	3.00e-11	62.40
IUUC-Ogl-077094	Oryza glaberrima	43.55	2.00e-12	65.50
IUUC-Ogu-078677	Oryza glumaepatula	43.55	2.00e-12	65.50
IUUC-Oin-079992	Oryza indica	43.55	2.00e-12	65.50
IUUC-Olo-080257	Oryza longistaminata	45.16	1.00e-12	66.20
IUUC-Ome-081943	Oryza meridionalis	43.55	2.00e-12	65.90
IUUC-Oni-082671	Oryza nivara	43.55	2.00e-12	65.50
IUUC-Opu-083644	Oryza punctata	43.55	3.00e-12	65.10
IUUC-Oru-084650	Oryza rufipogon	43.55	2.00e-12	65.50
IUUC-Osa-086110	Oryza sativa	43.55	2.00e-12	65.50
IUUC-Ola-086970	Oryzias latipes	44.55	3.00e-36	144.00
IUUC-Olu-087634	Ostreococcus lucimarinus	38.98	1.00e-10	58.90
IUUC-Oga-088242	Otolemur garnettii	68.75	9.00e-71	258.00
IUUC-Oar-089469	Ovis aries	70.31	9.00e-72	262.00
IUUC-Ptr-091254	Pan troglodytes	65.31	9.00e-59	218.00
IUUC-Pan-092919	Papio anubis	67.88	3.00e-63	234.00
IUUC-Psi-093929	Pelodiscus sinensis	86.29	2.00e-84	304.00
IUUC-Pma-094118	Petromyzon marinus	48.31	1.00e-21	94.00
IUUC-Ppa-095718	Physcomitrella patens	34.58	5.00e-13	67.80
IUUC-Pfo-097412	Poecilia formosa	50.91	1.00e-36	145.00
IUUC-Pab-098424	Pongo abelii	67.86	6.00e-63	233.00
IUUC-Pop-099483	Populus trichocarpa	37.10	1.00e-09	56.20
IUUC-Pca-100463	Procavia capensis	63.95	1.00e-33	135.00
IUUC-Ppe-101755	Prunus persica	40.32	3.00e-10	57.40
IUUC-Pva-102594	Pteropus vampyrus	65.31	7.00e-41	159.00
IUUC-Rno-105460	Rattus norvegicus	65.98	2.00e-60	224.00
IUUC-Sha-107487	Sarcophilus harrisii	79.27	5.00e-76	276.00
IUUC-Spo-108335	Schizosaccharomyces pombe	41.94	1.00e-08	54.30
IUUC-Smo-108908	Selaginella moellendorffii	38.71	1.00e-08	52.80
IUUC-Sit-109959	Setaria italica	37.70	2.00e-05	42.70
IUUC-Stu-112694	Solanum tuberosum	40.62	4.00e-10	57.80
IUUC-Sar-113601	Sorex araneus	69.11	4.00e-63	233.00
IUUC-Sbi-114398	Sorghum bicolor	40.98	5.00e-06	44.30
IUUC-Ssc-115911	Sus scrofa	71.43	1.00e-65	241.00
IUUC-Tgu-117264	Taeniopygia guttata	96.37	3.00e-86	310.00
IUUC-Tru-117663	Takifugu rubripes	50.29	3.00e-39	153.00
IUUC-Tsy-118883	Tarsius syrichta	62.50	5.00e-48	182.00
IUUC-Tae-124035	Triticum aestivum	42.62	4.00e-12	64.70
IUUC-Tur-126408	Triticum urartu	42.62	5.00e-12	64.70
IUUC-Ttr-128950	Tursiops truncatus	56.12	1.00e-53	202.00
IUUC-Vvi-130833	Vitis vinifera	41.94	9.00e-11	60.10
IUUC-Xtr-132879	Xenopus tropicalis	65.19	3.00e-44	170.00
IUUC-Xma-133319	Xiphophorus maculatus	50.99	3.00e-34	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence