iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107673

Ensembl Protein ID

EEB08204

UniProt Accession

B6K3Z7; B6K3Z7_SCHJY

Genbank Protein ID

EEB08204.2

Protein Name

AAA family ATPase Cdc48

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03345

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03345	EEB08204	EEB08204

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Other/Other	71.65	0.00e+00	1097.00	IUUC-Hsa-046162
UBD/Other/Other	74.88	0.00e+00	1218.00	IUUC-Sce-106244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

NVPSTMTSKP EAEPLHGSSH AADEKKAEDV ATAILKKKRK PNSLVVDDAT NDDNSVITLS 60
PNTMETLQLF RGDTVVVKGK RRKDTVLIVL TDEEMEDGVA RINRVVRNNL RVRLGDIVNV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGTACCAT CTACCATGAC CAGTAAACCT GAGGCTGAAC CGCTACATGG TTCATCTCAT 60
GCAGCAGAGT ACGCATTTTT TGAACCCTCT TTTTGATAGA TGGAACCATA ATTAACAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003593--AAA+_ATPase
IPR005938--AAA_ATPase_CDC48
IPR009010--Asp_de-COase-like_dom
IPR003959--ATPase_AAA_core
IPR003960--ATPase_AAA_CS
IPR000641--CbxX_CfqX
IPR004201--Cdc48_dom2
IPR029067--CDC48_domain_2-like
IPR003338--CDC4_N-term_subdom
IPR027417--P-loop_NTPase

PROSITE

PS00674--AAA

Pfam

PF00004--AAA
PF02933--CDC48_2
PF02359--CDC48_N

PRINTS

PR00819--CBXCFQXSUPER

SMART

SM00382--AAA
SM01072--CDC48_2
SM01073--CDC48_N

Gene Ontology

GO:0036266--C:Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0022625--C:cytosolic large ribosomal subunit
GO:0000837--C:Doa10p ubiquitin ligase complex
GO:0000839--C:Hrd1p ubiquitin ligase ERAD-L complex
GO:1990023--C:mitotic spindle midzone
GO:0000790--C:nuclear chromatin
GO:1990112--C:RQC complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0005524--F:ATP binding
GO:0016887--F:ATPase activity
GO:0019888--F:protein phosphatase regulator activity
GO:0046034--P:ATP metabolic process
GO:0016320--P:endoplasmic reticulum membrane fusion
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0061166--P:establishment of endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site
GO:0072671--P:mitochondria-associated ubiquitin-dependent protein catabolic process
GO:0051306--P:mitotic sister chromatid separation
GO:0051228--P:mitotic spindle disassembly
GO:0051974--P:negative regulation of telomerase activity
GO:0070651--P:nonfunctional rRNA decay
GO:0034727--P:piecemeal microautophagy of nucleus
GO:2001168--P:positive regulation of histone H2B ubiquitination
GO:1900182--P:positive regulation of protein localization to nucleus
GO:0016485--P:protein processing
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0034517--P:ribophagy
GO:1990116--P:ribosome-associated ubiquitin-dependent protein catabolic process
GO:1990171--P:SCF complex disassembly in response to cadmium stress
GO:0031134--P:sister chromatid biorientation
GO:0071629--P:ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome
GO:0071630--P:ubiquitin-dependent catabolism of misfolded proteins by nucleus-associated proteasome
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000524	Aegilops tauschii	69.21	0.00e+00	1070.00
IUUC-Aml-001849	Ailuropoda melanoleuca	70.80	0.00e+00	1110.00
IUUC-Atr-002619	Amborella trichopoda	68.59	0.00e+00	1135.00
IUUC-Apl-004070	Anas platyrhynchos	71.39	0.00e+00	1104.00
IUUC-Aca-004847	Anolis carolinensis	71.00	0.00e+00	1105.00
IUUC-Aly-005406	Arabidopsis lyrata	69.56	0.00e+00	1144.00
IUUC-Ath-006796	Arabidopsis thaliana	70.90	0.00e+00	1136.00
IUUC-Ago-008001	Ashbya gossypii	76.35	0.00e+00	1121.00
IUUC-Acl-008066	Aspergillus clavatus	78.66	0.00e+00	1214.00
IUUC-Afl-008505	Aspergillus flavus	78.84	0.00e+00	1244.00
IUUC-Afu-008840	Aspergillus fumigatus	81.61	0.00e+00	1239.00
IUUC-Ani-009368	Aspergillus nidulans	77.70	0.00e+00	1237.00
IUUC-Ang-009724	Aspergillus niger	79.16	0.00e+00	1245.00
IUUC-Aor-010204	Aspergillus oryzae	78.84	0.00e+00	1244.00
IUUC-Ate-010370	Aspergillus terreus	78.95	0.00e+00	1237.00
IUUC-Ame-011388	Astyanax mexicanus	71.64	0.00e+00	1087.00
IUUC-Bgr-012223	Blumeria graminis	78.07	0.00e+00	1255.00
IUUC-Bta-013188	Bos taurus	71.13	0.00e+00	1109.00
IUUC-Bci-013831	Botrytis cinerea	79.79	0.00e+00	1222.00
IUUC-Bdi-014967	Brachypodium distachyon	69.49	0.00e+00	1121.00
IUUC-Bol-016113	Brassica oleracea	71.43	0.00e+00	1140.00
IUUC-Bra-017796	Brassica rapa	71.56	0.00e+00	1142.00
IUUC-Cel-018243	Caenorhabditis elegans	67.91	0.00e+00	1077.00
IUUC-Cja-019904	Callithrix jacchus	70.74	0.00e+00	1097.00
IUUC-Cfa-020304	Canis familiaris	71.13	0.00e+00	1109.00
IUUC-Cpo-021518	Cavia porcellus	71.45	0.00e+00	1105.00
IUUC-Cre-022719	Chlamydomonas reinhardtii	69.29	0.00e+00	1107.00
IUUC-Csa-023444	Chlorocebus sabaeus	71.26	0.00e+00	1106.00
IUUC-Cho-024482	Choloepus hoffmanni	70.53	0.00e+00	1082.00
IUUC-Cin-025517	Ciona intestinalis	70.61	0.00e+00	1097.00
IUUC-Csv-026060	Ciona savignyi	70.14	0.00e+00	1135.00
IUUC-Cgl-026690	Colletotrichum gloeosporioides	78.76	0.00e+00	1248.00
IUUC-Cne-026910	Cryptococcus neoformans	71.34	0.00e+00	1157.00
IUUC-Cme-027145	Cyanidioschyzon merolae	68.84	0.00e+00	1096.00
IUUC-Dre-028487	Danio rerio	71.64	0.00e+00	1087.00
IUUC-Dno-029257	Dasypus novemcinctus	71.26	0.00e+00	1106.00
IUUC-Dor-030473	Dipodomys ordii	69.61	0.00e+00	1065.00
IUUC-Dse-031319	Dothistroma septosporum	78.09	0.00e+00	1209.00
IUUC-Dme-032203	Drosophila melanogaster	68.84	0.00e+00	1076.00
IUUC-Eca-033311	Equus caballus	71.45	0.00e+00	1108.00
IUUC-Eeu-035293	Erinaceus europaeus	74.81	3.00e-175	606.00
IUUC-Fca-036097	Felis catus	72.12	0.00e+00	1064.00
IUUC-Fal-037292	Ficedula albicollis	71.58	0.00e+00	1109.00
IUUC-Fox-037827	Fusarium oxysporum	78.03	0.00e+00	1243.00
IUUC-Fso-038226	Fusarium solani	78.68	0.00e+00	1242.00
IUUC-Gmo-039157	Gadus morhua	66.18	0.00e+00	993.00
IUUC-Ggr-039951	Gaeumannomyces graminis	79.46	0.00e+00	1229.00
IUUC-Gga-041183	Gallus gallus	71.11	0.00e+00	1108.00
IUUC-Gac-042039	Gasterosteus aculeatus	71.13	0.00e+00	1073.00
IUUC-Gma-044090	Glycine max	66.87	0.00e+00	1108.00
IUUC-Ggo-045568	Gorilla gorilla	71.26	0.00e+00	1106.00
IUUC-Hsa-046162	Homo sapiens	71.26	0.00e+00	1106.00
IUUC-Hvu-047107	Hordeum vulgare	71.41	0.00e+00	919.00
IUUC-Itr-047885	Ictidomys tridecemlineatus	71.08	0.00e+00	1103.00
IUUC-Kpa-049220	Komagataella pastoris	75.90	0.00e+00	1230.00
IUUC-Lch-050657	Latimeria chalumnae	70.33	0.00e+00	985.00
IUUC-Lpe-051083	Leersia perrieri	69.88	0.00e+00	1122.00
IUUC-Loc-052064	Lepisosteus oculatus	71.50	0.00e+00	1090.00
IUUC-Lma-053323	Leptosphaeria maculans	79.72	0.00e+00	1227.00
IUUC-Laf-054574	Loxodonta africana	71.45	0.00e+00	1107.00
IUUC-Mcc-055448	Macaca mulatta	71.26	0.00e+00	1106.00
IUUC-Meu-056316	Macropus eugenii	66.62	0.00e+00	1005.00
IUUC-Mor-057057	Magnaporthe oryzae	79.72	0.00e+00	1230.00
IUUC-Mpo-057406	Magnaporthe poae	79.59	0.00e+00	1218.00
IUUC-Mtr-057648	Medicago truncatula	69.00	0.00e+00	1145.00
IUUC-Mla-059156	Melampsora laricipopulina	73.29	0.00e+00	1190.00
IUUC-Mga-060004	Meleagris gallopavo	68.65	0.00e+00	956.00
IUUC-Mvi-060488	Microbotryum violaceum	73.31	0.00e+00	1169.00
IUUC-Mmr-061027	Microcebus murinus	71.45	0.00e+00	1106.00
IUUC-Mdo-062159	Monodelphis domestica	71.39	0.00e+00	1109.00
IUUC-Mmu-063633	Mus musculus	71.26	0.00e+00	1106.00
IUUC-Mac-064919	Musa acuminata	69.97	0.00e+00	1127.00
IUUC-Mpu-066078	Mustela putorius furo	71.13	0.00e+00	1109.00
IUUC-Mlu-067757	Myotis lucifugus	71.13	0.00e+00	1106.00
IUUC-Nfi-068533	Neosartorya fischeri	81.48	0.00e+00	1231.00
IUUC-Ncr-068775	Neurospora crassa	79.64	0.00e+00	1201.00
IUUC-Nle-069424	Nomascus leucogenys	71.45	0.00e+00	1107.00
IUUC-Opr-071147	Ochotona princeps	70.98	0.00e+00	1091.00
IUUC-Ont-071351	Oreochromis niloticus	71.64	0.00e+00	1062.00
IUUC-Oan-073335	Ornithorhynchus anatinus	69.45	0.00e+00	1111.00
IUUC-Ocu-074072	Oryctolagus cuniculus	71.26	0.00e+00	1106.00
IUUC-Oba-075914	Oryza barthii	70.82	0.00e+00	1133.00
IUUC-Obr-076224	Oryza brachyantha	71.39	0.00e+00	1107.00
IUUC-Ogl-077282	Oryza glaberrima	71.17	0.00e+00	1146.00
IUUC-Ogu-078174	Oryza glumaepatula	70.82	0.00e+00	1133.00
IUUC-Oin-079103	Oryza indica	70.82	0.00e+00	1133.00
IUUC-Olo-080675	Oryza longistaminata	70.69	0.00e+00	1132.00
IUUC-Ome-081959	Oryza meridionalis	71.17	0.00e+00	1147.00
IUUC-Oni-082078	Oryza nivara	70.82	0.00e+00	1133.00
IUUC-Opu-083806	Oryza punctata	70.89	0.00e+00	1139.00
IUUC-Oru-084634	Oryza rufipogon	70.82	0.00e+00	1135.00
IUUC-Osa-085960	Oryza sativa	70.82	0.00e+00	1133.00
IUUC-Ola-086382	Oryzias latipes	70.85	0.00e+00	1061.00
IUUC-Olu-087839	Ostreococcus lucimarinus	69.78	0.00e+00	1091.00
IUUC-Oga-088037	Otolemur garnettii	71.65	0.00e+00	1109.00
IUUC-Oar-089684	Ovis aries	70.80	0.00e+00	1110.00
IUUC-Ptr-091378	Pan troglodytes	71.26	0.00e+00	1106.00
IUUC-Pan-092849	Papio anubis	71.26	0.00e+00	1106.00
IUUC-Psi-093725	Pelodiscus sinensis	70.43	0.00e+00	1061.00
IUUC-Pma-094537	Petromyzon marinus	67.98	9.00e-162	560.00
IUUC-Pno-094915	Phaeosphaeria nodorum	82.21	0.00e+00	1172.00
IUUC-Ppa-095632	Physcomitrella patens	69.27	0.00e+00	1091.00
IUUC-Pfo-097440	Poecilia formosa	71.50	0.00e+00	1060.00
IUUC-Pab-098469	Pongo abelii	71.26	0.00e+00	1106.00
IUUC-Pop-100047	Populus trichocarpa	70.50	0.00e+00	1125.00
IUUC-Pca-100399	Procavia capensis	66.84	0.00e+00	1012.00
IUUC-Ppe-101767	Prunus persica	68.62	0.00e+00	1147.00
IUUC-Pva-102426	Pteropus vampyrus	70.74	0.00e+00	1088.00
IUUC-Pgr-103599	Puccinia graminis	73.44	0.00e+00	1182.00
IUUC-Ptt-103740	Puccinia triticina	73.79	0.00e+00	1184.00
IUUC-Pte-104030	Pyrenophora teres	77.22	0.00e+00	1226.00
IUUC-Pyt-104541	Pyrenophora triticirepentis	76.81	0.00e+00	1222.00
IUUC-Rno-105144	Rattus norvegicus	71.26	0.00e+00	1106.00
IUUC-Sce-106244	Saccharomyces cerevisiae	75.62	0.00e+00	1149.00
IUUC-Sha-106589	Sarcophilus harrisii	71.58	0.00e+00	1109.00
IUUC-Spo-108247	Schizosaccharomyces pombe	91.41	0.00e+00	1409.00
IUUC-Ssl-108642	Sclerotinia sclerotiorum	80.44	0.00e+00	1228.00
IUUC-Smo-108877	Selaginella moellendorffii	71.15	0.00e+00	1128.00
IUUC-Sit-110368	Setaria italica	70.79	0.00e+00	1118.00
IUUC-Sly-111151	Solanum lycopersicum	69.55	0.00e+00	1136.00
IUUC-Stu-111959	Solanum tuberosum	70.19	0.00e+00	1160.00
IUUC-Sar-113021	Sorex araneus	71.45	0.00e+00	1107.00
IUUC-Sbi-114462	Sorghum bicolor	70.53	0.00e+00	1120.00
IUUC-Sre-115052	Sporisorium reilianum	74.30	0.00e+00	1188.00
IUUC-Ssc-116293	Sus scrofa	70.95	0.00e+00	1105.00
IUUC-Tgu-116544	Taeniopygia guttata	68.88	0.00e+00	1030.00
IUUC-Tru-117991	Takifugu rubripes	73.48	0.00e+00	783.00
IUUC-Tsy-119131	Tarsius syrichta	74.73	9.00e-168	581.00
IUUC-Tni-120192	Tetraodon nigroviridis	71.99	0.00e+00	1064.00
IUUC-Tca-121502	Theobroma cacao	68.72	0.00e+00	1088.00
IUUC-Tre-122189	Trichoderma reesei	77.88	0.00e+00	1235.00
IUUC-Tvi-122310	Trichoderma virens	79.20	0.00e+00	1221.00
IUUC-Tae-124332	Triticum aestivum	70.25	0.00e+00	1080.00
IUUC-Tur-126733	Triticum urartu	69.95	0.00e+00	1066.00
IUUC-Tme-127147	Tuber melanosporum	79.46	0.00e+00	1199.00
IUUC-Tbe-127255	Tupaia belangeri	67.10	0.00e+00	1035.00
IUUC-Ttr-128876	Tursiops truncatus	71.06	0.00e+00	1100.00
IUUC-Uma-129448	Ustilago maydis	73.00	0.00e+00	1170.00
IUUC-Vda-129800	Verticillium dahliae	77.60	0.00e+00	1218.00
IUUC-Vpa-130573	Vicugna pacos	75.65	0.00e+00	670.00
IUUC-Vvi-131622	Vitis vinifera	70.59	0.00e+00	1128.00
IUUC-Xtr-132458	Xenopus tropicalis	72.15	0.00e+00	1061.00
IUUC-Xma-134045	Xiphophorus maculatus	71.50	0.00e+00	1060.00
IUUC-Yli-134382	Yarrowia lipolytica	79.05	0.00e+00	1244.00
IUUC-Zma-135400	Zea mays	70.53	0.00e+00	1119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence