iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ggo-044707

UUCD1 version

UUC-GoG-01138

Ensembl Protein ID

ENSGGOP00000001361.2

UniProt Accession

G3QGA8; G3QGA8_GORGO

Protein Name

Uncharacterized protein

Gene Name

USP39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000001377.2	ENSGGOT00000001386.2	ENSGGOP00000001361.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.30e-43	149.1	240	555

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 16   LQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaqEflaflld 101
           L +Lsn+p+lr+++le+++ k  ++ p +    l++ + +l+++lw   + k +vsp+e+l+a+  ++++ f+ ++q D  +fl+++l+
   Q: 240  LTALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWnpRNFKAHVSPHEMLQAVVLCSKKtFQITKQGDGVDFLSWFLN 328
           789****************9999***********************999999**************99999****************** PP
   S: 102  qleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk................sqikclecdnvssreepfldlsl 174
           +l+++l                          +kkk+k++++d+Fqg+++                +q+  ++  +++  e++f++l+l
   Q: 329  ALHSAL------------------------GGTKKKKKTIVTDVFQGSMRiftkklphpdlpaeekEQLLHNDEYQETMVESTFMYLTL 393
           ******........................4578888889999999999888899999999998889********************** PP
   S: 175  pvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkve 254
           ++p     k e          l ++L++f    e e    y++ k     +  k+++l+klP++Li+ +kRf  ++++ + ek+ + v+
   Q: 394  DLPTAPLYKDEkeqliipqvPLFNILAKFNGITEKE----YKTYK----ENFLKRFQLTKLPPYLIFCIKRF--TKNNFFVEKNPTIVN 472
           ***877776664455566666666666666666655....44333....3489*******************..88889********** PP
   S: 255  fple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
           fp++ +dl+++++++ ++++++++Y+Lia +vH G++s+G Y  +v +  +gkW+++ D +Vt +  + +     s+aY+ ++krr
   Q: 473  FPITnVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHhGTGKWYELQDLQVTDILPQMITL---SEAYIQIWKRR 555
           **********************************************9935666******************9...********985 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MSGRSKRESR GSTRGKRESE SRGSAGRVKR ERDREREPEA ASSRGSPVRV KREVEPASAR 60
EAPASVVPFV RVKREREVDE DSEPEREVRA KNGRVDSEDR RSRHCPYLDT INRSVLDFDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGGCC GGTCTAAGCG GGAGTCTCGC GGTTCCACCC GCGGGAAGCG AGAGTCCGAG 60
TCGCGGGGCA GCGCCGGTCG CGTCAAGCGG GAGCGAGATC GGGAGCGGGA GCCTGAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	49.46	4.00e-112	398.00
IUUC-Aml-001846	Ailuropoda melanoleuca	91.79	0.00e+00	969.00
IUUC-Atr-002758	Amborella trichopoda	48.29	4.00e-113	401.00
IUUC-Apl-003336	Anas platyrhynchos	90.83	4.00e-170	590.00
IUUC-Aca-004846	Anolis carolinensis	89.89	0.00e+00	818.00
IUUC-Aly-005683	Arabidopsis lyrata	48.14	1.00e-102	366.00
IUUC-Ath-007661	Arabidopsis thaliana	47.48	4.00e-102	365.00
IUUC-Ago-007802	Ashbya gossypii	29.47	1.00e-48	187.00
IUUC-Acl-008304	Aspergillus clavatus	37.94	3.00e-75	276.00
IUUC-Afl-008735	Aspergillus flavus	60.40	3.00e-35	142.00
IUUC-Afu-009100	Aspergillus fumigatus	36.20	9.00e-74	271.00
IUUC-Ani-009138	Aspergillus nidulans	44.53	2.00e-78	286.00
IUUC-Ang-009661	Aspergillus niger	41.45	8.00e-80	291.00
IUUC-Aor-010235	Aspergillus oryzae	37.08	4.00e-72	265.00
IUUC-Ate-010346	Aspergillus terreus	33.33	5.00e-56	212.00
IUUC-Ame-011688	Astyanax mexicanus	83.01	0.00e+00	766.00
IUUC-Bgr-011998	Blumeria graminis	43.89	2.00e-98	352.00
IUUC-Bta-013407	Bos taurus	91.68	0.00e+00	939.00
IUUC-Bci-013977	Botrytis cinerea	45.00	5.00e-97	348.00
IUUC-Bdi-014361	Brachypodium distachyon	49.46	2.00e-117	416.00
IUUC-Bol-016317	Brassica oleracea	48.02	3.00e-101	362.00
IUUC-Bra-017952	Brassica rapa	46.88	1.00e-102	366.00
IUUC-Cel-018491	Caenorhabditis elegans	57.69	8.00e-159	553.00
IUUC-Cja-019134	Callithrix jacchus	92.78	0.00e+00	984.00
IUUC-Cfa-020098	Canis familiaris	92.40	0.00e+00	978.00
IUUC-Cpo-021595	Cavia porcellus	91.62	0.00e+00	912.00
IUUC-Cre-022886	Chlamydomonas reinhardtii	50.81	2.00e-31	127.00
IUUC-Csa-024121	Chlorocebus sabaeus	92.87	0.00e+00	969.00
IUUC-Cho-025057	Choloepus hoffmanni	60.10	5.00e-60	224.00
IUUC-Cin-025473	Ciona intestinalis	62.96	2.00e-64	238.00
IUUC-Csv-025815	Ciona savignyi	70.94	1.00e-96	347.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	41.33	3.00e-94	338.00
IUUC-Cne-026802	Cryptococcus neoformans	40.40	1.00e-86	313.00
IUUC-Dre-027870	Danio rerio	82.66	0.00e+00	761.00
IUUC-Dno-029655	Dasypus novemcinctus	88.11	0.00e+00	958.00
IUUC-Dor-030762	Dipodomys ordii	92.21	0.00e+00	929.00
IUUC-Dse-031441	Dothistroma septosporum	41.58	4.00e-90	325.00
IUUC-Dme-032101	Drosophila melanogaster	59.69	3.00e-160	558.00
IUUC-Ete-032841	Echinops telfairi	85.77	0.00e+00	894.00
IUUC-Eca-033463	Equus caballus	92.74	0.00e+00	927.00
IUUC-Eeu-034438	Erinaceus europaeus	65.51	0.00e+00	650.00
IUUC-Fca-035774	Felis catus	92.21	0.00e+00	976.00
IUUC-Fal-036988	Ficedula albicollis	86.47	0.00e+00	831.00
IUUC-Fox-037895	Fusarium oxysporum	42.98	1.00e-90	327.00
IUUC-Fso-038450	Fusarium solani	43.84	4.00e-91	328.00
IUUC-Gmo-038874	Gadus morhua	81.64	0.00e+00	749.00
IUUC-Ggr-040115	Gaeumannomyces graminis	41.72	7.00e-89	321.00
IUUC-Gac-041650	Gasterosteus aculeatus	79.41	0.00e+00	771.00
IUUC-Gma-043002	Glycine max	48.38	4.00e-112	398.00
IUUC-Hsa-046041	Homo sapiens	93.06	0.00e+00	972.00
IUUC-Hvu-047816	Hordeum vulgare	46.55	3.00e-106	379.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	89.38	3.00e-173	600.00
IUUC-Lch-050419	Latimeria chalumnae	85.62	0.00e+00	818.00
IUUC-Lpe-051593	Leersia perrieri	50.22	1.00e-117	416.00
IUUC-Loc-052930	Lepisosteus oculatus	79.80	0.00e+00	776.00
IUUC-Lma-053256	Leptosphaeria maculans	43.72	4.00e-95	342.00
IUUC-Laf-053555	Loxodonta africana	91.71	0.00e+00	928.00
IUUC-Mcc-055630	Macaca mulatta	92.87	0.00e+00	969.00
IUUC-Meu-056579	Macropus eugenii	95.06	1.00e-180	625.00
IUUC-Mor-057078	Magnaporthe oryzae	38.87	1.00e-87	317.00
IUUC-Mpo-057607	Magnaporthe poae	37.86	3.00e-84	305.00
IUUC-Mtr-058644	Medicago truncatula	45.92	4.00e-112	398.00
IUUC-Mla-059120	Melampsora laricipopulina	37.45	8.00e-85	308.00
IUUC-Mvi-060429	Microbotryum violaceum	41.53	5.00e-57	215.00
IUUC-Mmr-061313	Microcebus murinus	91.83	0.00e+00	932.00
IUUC-Mdo-062801	Monodelphis domestica	85.42	0.00e+00	948.00
IUUC-Mmu-064424	Mus musculus	89.91	0.00e+00	929.00
IUUC-Mac-064694	Musa acuminata	49.47	2.00e-114	405.00
IUUC-Mpu-065980	Mustela putorius furo	91.69	0.00e+00	771.00
IUUC-Mlu-067007	Myotis lucifugus	90.49	0.00e+00	957.00
IUUC-Nfi-068274	Neosartorya fischeri	36.20	4.00e-74	272.00
IUUC-Ncr-068829	Neurospora crassa	44.09	1.00e-89	323.00
IUUC-Nle-069171	Nomascus leucogenys	92.65	0.00e+00	887.00
IUUC-Opr-070494	Ochotona princeps	84.79	0.00e+00	817.00
IUUC-Ont-072290	Oreochromis niloticus	80.53	0.00e+00	795.00
IUUC-Oan-073099	Ornithorhynchus anatinus	90.38	0.00e+00	872.00
IUUC-Ocu-074642	Oryctolagus cuniculus	91.91	0.00e+00	924.00
IUUC-Oba-075886	Oryza barthii	49.57	7.00e-117	414.00
IUUC-Obr-076220	Oryza brachyantha	49.78	3.00e-118	418.00
IUUC-Ogl-077682	Oryza glaberrima	49.57	3.00e-117	415.00
IUUC-Ogu-078492	Oryza glumaepatula	49.57	3.00e-117	415.00
IUUC-Oin-079956	Oryza indica	49.57	3.00e-117	415.00
IUUC-Olo-080239	Oryza longistaminata	44.89	1.00e-98	354.00
IUUC-Ome-081573	Oryza meridionalis	49.57	2.00e-117	416.00
IUUC-Oni-082975	Oryza nivara	49.57	3.00e-117	415.00
IUUC-Opu-083724	Oryza punctata	49.78	1.00e-117	416.00
IUUC-Oru-084566	Oryza rufipogon	49.57	3.00e-117	415.00
IUUC-Osa-086008	Oryza sativa	49.57	2.00e-117	416.00
IUUC-Ola-086967	Oryzias latipes	83.44	0.00e+00	772.00
IUUC-Olu-087614	Ostreococcus lucimarinus	41.11	3.00e-85	308.00
IUUC-Oga-088047	Otolemur garnettii	80.37	0.00e+00	661.00
IUUC-Oar-089393	Ovis aries	92.47	0.00e+00	964.00
IUUC-Ptr-090561	Pan troglodytes	93.26	0.00e+00	974.00
IUUC-Pan-091812	Papio anubis	92.68	0.00e+00	967.00
IUUC-Psi-093507	Pelodiscus sinensis	99.32	2.00e-171	594.00
IUUC-Pno-095104	Phaeosphaeria nodorum	42.68	1.00e-92	333.00
IUUC-Ppa-095995	Physcomitrella patens	48.16	2.00e-118	419.00
IUUC-Pfo-096754	Poecilia formosa	82.19	0.00e+00	786.00
IUUC-Pab-098053	Pongo abelii	93.26	0.00e+00	974.00
IUUC-Pop-099230	Populus trichocarpa	47.73	4.00e-118	418.00
IUUC-Pca-100407	Procavia capensis	84.20	0.00e+00	837.00
IUUC-Ppe-101699	Prunus persica	48.91	1.00e-112	400.00
IUUC-Pva-103159	Pteropus vampyrus	89.38	0.00e+00	971.00
IUUC-Pgr-103433	Puccinia graminis	39.10	7.00e-89	321.00
IUUC-Ptt-103701	Puccinia triticina	36.00	1.00e-76	280.00
IUUC-Pte-104281	Pyrenophora teres	43.26	3.00e-94	338.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	43.26	5.00e-94	338.00
IUUC-Rno-105531	Rattus norvegicus	90.62	0.00e+00	974.00
IUUC-Sce-106368	Saccharomyces cerevisiae	28.00	5.00e-36	145.00
IUUC-Sha-107093	Sarcophilus harrisii	90.06	0.00e+00	914.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	40.29	9.00e-98	350.00
IUUC-Spo-108018	Schizosaccharomyces pombe	43.38	2.00e-96	345.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	42.76	9.00e-89	320.00
IUUC-Smo-108892	Selaginella moellendorffii	48.92	2.00e-116	412.00
IUUC-Sit-110782	Setaria italica	50.32	6.00e-119	421.00
IUUC-Sly-111308	Solanum lycopersicum	48.86	5.00e-122	431.00
IUUC-Stu-112447	Solanum tuberosum	48.31	7.00e-121	427.00
IUUC-Sar-113352	Sorex araneus	76.46	0.00e+00	727.00
IUUC-Sbi-114806	Sorghum bicolor	50.86	3.00e-118	418.00
IUUC-Sre-115059	Sporisorium reilianum	47.62	3.00e-57	216.00
IUUC-Ssc-115677	Sus scrofa	88.62	0.00e+00	667.00
IUUC-Tru-118478	Takifugu rubripes	80.71	0.00e+00	783.00
IUUC-Tsy-119082	Tarsius syrichta	78.33	0.00e+00	648.00
IUUC-Tni-120419	Tetraodon nigroviridis	80.00	0.00e+00	766.00
IUUC-Tca-121294	Theobroma cacao	47.18	5.00e-119	421.00
IUUC-Tre-121962	Trichoderma reesei	42.58	1.00e-85	310.00
IUUC-Tvi-122280	Trichoderma virens	42.46	5.00e-94	338.00
IUUC-Tae-125873	Triticum aestivum	50.54	1.00e-118	420.00
IUUC-Tur-126551	Triticum urartu	50.54	2.00e-118	419.00
IUUC-Tme-126959	Tuber melanosporum	43.31	2.00e-97	349.00
IUUC-Tbe-127737	Tupaia belangeri	87.83	0.00e+00	861.00
IUUC-Ttr-129211	Tursiops truncatus	85.86	6.00e-146	510.00
IUUC-Uma-129591	Ustilago maydis	36.66	2.00e-80	293.00
IUUC-Vda-129674	Verticillium dahliae	41.36	2.00e-79	289.00
IUUC-Vpa-130793	Vicugna pacos	81.48	0.00e+00	791.00
IUUC-Xtr-132430	Xenopus tropicalis	84.33	0.00e+00	810.00
IUUC-Xma-133515	Xiphophorus maculatus	82.61	0.00e+00	776.00
IUUC-Yli-134488	Yarrowia lipolytica	35.53	8.00e-66	244.00
IUUC-Zma-134748	Zea mays	50.64	1.00e-118	420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence