iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	2.30e-07	32.1	22	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iCl  f ++ ++  C H f+++C+++w      + ++++ + +CPlC+
   Q: 22   CPICLGQFLRESYLDTCFHKFCFNCIKQWikvvSSKASKQRSSVTCPLCK 71
           ********99899999**************996444444666779****7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAAKEIAGGS GSIDDGSDFD PCPICLGQFL RESYLDTCFH KFCFNCIKQW IKVVSSKASK 60
QRSSVTCPLC KTENLSIIHN YDGCSFERHY IDPNIPDGFV LTKEQRYRLQ CYYTESGFLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAACGACG CCGTAACGCT GAATCAGCGC CAAGCGGAGA GAGACCTGAG TCAGTGAGTT 60
GGTATGGCGG CGAAGGAGAT CGCCGGCGGG AGCGGTTCTA TTGACGATGG ATCCGATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000940	Aegilops tauschii	42.99	4.00e-49	187.00
IUUC-Atr-002964	Amborella trichopoda	46.69	1.00e-65	242.00
IUUC-Apl-003666	Anas platyrhynchos	46.55	8.00e-11	62.00
IUUC-Aca-005305	Anolis carolinensis	43.48	2.00e-11	64.30
IUUC-Aly-005926	Arabidopsis lyrata	91.73	6.00e-132	462.00
IUUC-Ame-011109	Astyanax mexicanus	34.04	1.00e-10	61.60
IUUC-Bdi-014270	Brachypodium distachyon	46.48	1.00e-55	209.00
IUUC-Bol-015307	Brassica oleracea	77.70	2.00e-116	410.00
IUUC-Bra-017073	Brassica rapa	63.18	3.00e-83	300.00
IUUC-Cja-019105	Callithrix jacchus	35.64	6.00e-12	66.20
IUUC-Cpo-022335	Cavia porcellus	43.94	9.00e-11	62.00
IUUC-Csa-023870	Chlorocebus sabaeus	36.63	7.00e-12	65.90
IUUC-Dno-028963	Dasypus novemcinctus	34.65	1.00e-11	65.10
IUUC-Dor-030239	Dipodomys ordii	36.46	1.00e-11	65.10
IUUC-Fca-036383	Felis catus	34.65	1.00e-11	65.10
IUUC-Fal-037209	Ficedula albicollis	40.91	4.00e-10	60.10
IUUC-Gma-043386	Glycine max	51.94	1.00e-77	281.00
IUUC-Ggo-044445	Gorilla gorilla	35.64	7.00e-12	65.90
IUUC-Hsa-045844	Homo sapiens	35.64	7.00e-12	65.90
IUUC-Hvu-047532	Hordeum vulgare	40.48	2.00e-24	104.00
IUUC-Lpe-051274	Leersia perrieri	43.38	3.00e-46	177.00
IUUC-Loc-052944	Lepisosteus oculatus	44.83	1.00e-09	58.20
IUUC-Mcc-054800	Macaca mulatta	35.64	8.00e-12	65.90
IUUC-Meu-056806	Macropus eugenii	35.63	6.00e-10	58.50
IUUC-Mtr-058378	Medicago truncatula	53.26	3.00e-75	274.00
IUUC-Mmu-064138	Mus musculus	34.65	2.00e-11	64.70
IUUC-Mac-064635	Musa acuminata	42.75	9.00e-32	128.00
IUUC-Mlu-067088	Myotis lucifugus	35.29	6.00e-11	62.80
IUUC-Opr-071076	Ochotona princeps	43.94	1.00e-10	62.00
IUUC-Oan-073069	Ornithorhynchus anatinus	36.46	1.00e-12	67.00
IUUC-Ocu-074826	Oryctolagus cuniculus	34.65	2.00e-11	64.30
IUUC-Oba-075429	Oryza barthii	45.74	3.00e-54	204.00
IUUC-Obr-076084	Oryza brachyantha	46.79	2.00e-54	205.00
IUUC-Ogl-077444	Oryza glaberrima	45.74	1.00e-53	202.00
IUUC-Ogu-078603	Oryza glumaepatula	45.74	3.00e-54	204.00
IUUC-Oin-079777	Oryza indica	45.74	3.00e-54	204.00
IUUC-Olo-080517	Oryza longistaminata	43.50	2.00e-44	171.00
IUUC-Oni-082396	Oryza nivara	45.74	3.00e-54	204.00
IUUC-Opu-083698	Oryza punctata	46.64	9.00e-56	209.00
IUUC-Oru-084305	Oryza rufipogon	45.87	1.00e-53	202.00
IUUC-Osa-085962	Oryza sativa	40.31	1.00e-25	108.00
IUUC-Ptr-091233	Pan troglodytes	35.64	7.00e-12	65.90
IUUC-Pan-092743	Papio anubis	35.64	8.00e-12	65.90
IUUC-Psi-093669	Pelodiscus sinensis	32.67	7.00e-10	58.90
IUUC-Ppa-095273	Physcomitrella patens	33.86	2.00e-27	115.00
IUUC-Pfo-096521	Poecilia formosa	42.37	5.00e-10	60.10
IUUC-Pop-100021	Populus trichocarpa	56.44	1.00e-85	308.00
IUUC-Pca-100967	Procavia capensis	43.94	1.00e-10	61.60
IUUC-Ppe-101958	Prunus persica	56.76	7.00e-82	296.00
IUUC-Rno-105730	Rattus norvegicus	34.65	6.00e-12	66.20
IUUC-Sha-106588	Sarcophilus harrisii	37.04	2.00e-09	58.20
IUUC-Sit-109937	Setaria italica	44.87	2.00e-53	201.00
IUUC-Sly-110956	Solanum lycopersicum	49.45	9.00e-77	279.00
IUUC-Stu-111938	Solanum tuberosum	57.41	1.00e-70	258.00
IUUC-Sbi-114573	Sorghum bicolor	44.90	1.00e-45	175.00
IUUC-Tru-118393	Takifugu rubripes	47.46	2.00e-10	60.50
IUUC-Tsy-119408	Tarsius syrichta	34.65	9.00e-12	65.50
IUUC-Tni-120664	Tetraodon nigroviridis	47.46	4.00e-10	59.30
IUUC-Tca-121484	Theobroma cacao	52.16	2.00e-75	275.00
IUUC-Tae-122787	Triticum aestivum	40.47	1.00e-51	196.00
IUUC-Tur-126656	Triticum urartu	42.35	8.00e-44	169.00
IUUC-Vpa-130297	Vicugna pacos	34.65	1.00e-11	65.10
IUUC-Vvi-131069	Vitis vinifera	55.21	3.00e-83	300.00
IUUC-Xtr-132845	Xenopus tropicalis	31.53	2.00e-12	67.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence