iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000008577.1	ENSLACT00000009802.1	ENSLACP00000009727.1
ENSLACG00000008577.1	ENSLACT00000009803.1	ENSLACP00000009728.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-17	62.2	749	780

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ +t l++ +d +++ s s+D  i  WD+
   Q: 749  GHSSYITHLDWsPDnNRIMSNSGDYEILYWDI 780
           8***********888****************6 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MEDSLPGLTS VCESSTLLNF CTDDSISATS TSDVQDRLSA LELRVQQQED EITVLKAALA 60
DVLRRLAVSE DQAATMRKMT PGKGQPALRE AFSMSCITNG SAMTRKSSHS SAMSVARKET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTTTATT GTGAAAACTA GTCAAAATGT ATAAAAGCAA AAAAGAATAC AGCTAACAGT 60
TTTATCCTTT TGACTTTTAA TGTGGTCAGA AAAGCTGCCT CAGAAATATG ATTAGAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

KEGG

lcm:102367334

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001465	Ailuropoda melanoleuca	77.98	0.00e+00	1538.00
IUUC-Apl-003728	Anas platyrhynchos	88.60	0.00e+00	1318.00
IUUC-Aca-004921	Anolis carolinensis	72.04	0.00e+00	1364.00
IUUC-Ame-011846	Astyanax mexicanus	78.97	0.00e+00	1483.00
IUUC-Bta-013457	Bos taurus	77.47	0.00e+00	1555.00
IUUC-Cja-019963	Callithrix jacchus	75.38	0.00e+00	1491.00
IUUC-Cfa-020344	Canis familiaris	80.13	0.00e+00	1533.00
IUUC-Cpo-022426	Cavia porcellus	80.49	0.00e+00	1522.00
IUUC-Csa-023822	Chlorocebus sabaeus	76.82	0.00e+00	1500.00
IUUC-Cho-024398	Choloepus hoffmanni	79.46	3.00e-179	622.00
IUUC-Dno-029822	Dasypus novemcinctus	78.52	0.00e+00	1511.00
IUUC-Ete-032548	Echinops telfairi	74.87	0.00e+00	1150.00
IUUC-Eca-033255	Equus caballus	77.86	0.00e+00	1549.00
IUUC-Fca-035637	Felis catus	81.08	0.00e+00	1556.00
IUUC-Fal-037030	Ficedula albicollis	80.77	0.00e+00	1534.00
IUUC-Gmo-038662	Gadus morhua	83.24	0.00e+00	1294.00
IUUC-Gga-041202	Gallus gallus	83.60	0.00e+00	1565.00
IUUC-Gac-041394	Gasterosteus aculeatus	76.76	0.00e+00	1377.00
IUUC-Ggo-044734	Gorilla gorilla	76.36	0.00e+00	1478.00
IUUC-Hsa-046616	Homo sapiens	77.58	0.00e+00	1522.00
IUUC-Loc-052753	Lepisosteus oculatus	83.95	0.00e+00	1495.00
IUUC-Laf-054189	Loxodonta africana	74.23	0.00e+00	1499.00
IUUC-Mcc-055697	Macaca mulatta	78.04	0.00e+00	1530.00
IUUC-Mmr-060888	Microcebus murinus	77.32	0.00e+00	1489.00
IUUC-Mdo-062025	Monodelphis domestica	79.39	0.00e+00	1406.00
IUUC-Mmu-063591	Mus musculus	80.15	0.00e+00	1534.00
IUUC-Mpu-065718	Mustela putorius furo	78.26	0.00e+00	1549.00
IUUC-Mlu-068068	Myotis lucifugus	77.27	0.00e+00	1510.00
IUUC-Nle-069281	Nomascus leucogenys	75.66	0.00e+00	1433.00
IUUC-Opr-070938	Ochotona princeps	62.29	0.00e+00	1053.00
IUUC-Ont-071488	Oreochromis niloticus	74.03	0.00e+00	1331.00
IUUC-Oan-073561	Ornithorhynchus anatinus	71.63	0.00e+00	987.00
IUUC-Ocu-074399	Oryctolagus cuniculus	80.86	0.00e+00	1556.00
IUUC-Ola-086551	Oryzias latipes	72.86	0.00e+00	1323.00
IUUC-Oga-088783	Otolemur garnettii	81.31	0.00e+00	1565.00
IUUC-Oar-089716	Ovis aries	77.08	0.00e+00	1536.00
IUUC-Ptr-090942	Pan troglodytes	75.96	0.00e+00	1480.00
IUUC-Pan-091831	Papio anubis	78.12	0.00e+00	1532.00
IUUC-Psi-093094	Pelodiscus sinensis	80.22	0.00e+00	1625.00
IUUC-Pfo-097066	Poecilia formosa	70.11	0.00e+00	1258.00
IUUC-Pab-098351	Pongo abelii	76.26	0.00e+00	1479.00
IUUC-Pva-102783	Pteropus vampyrus	67.64	0.00e+00	1278.00
IUUC-Rno-105412	Rattus norvegicus	80.23	0.00e+00	1457.00
IUUC-Sha-106597	Sarcophilus harrisii	78.40	0.00e+00	1528.00
IUUC-Smo-108882	Selaginella moellendorffii	24.18	5.00e-11	63.50
IUUC-Sar-113748	Sorex araneus	69.91	0.00e+00	1205.00
IUUC-Ssc-115740	Sus scrofa	77.09	0.00e+00	1495.00
IUUC-Tgu-116696	Taeniopygia guttata	80.85	0.00e+00	1491.00
IUUC-Tru-118506	Takifugu rubripes	75.11	0.00e+00	1340.00
IUUC-Tsy-119375	Tarsius syrichta	70.64	0.00e+00	1351.00
IUUC-Tni-120392	Tetraodon nigroviridis	70.00	0.00e+00	1212.00
IUUC-Tbe-127468	Tupaia belangeri	71.57	0.00e+00	1366.00
IUUC-Ttr-128746	Tursiops truncatus	75.25	0.00e+00	1507.00
IUUC-Vpa-130697	Vicugna pacos	76.77	0.00e+00	1492.00
IUUC-Xtr-132731	Xenopus tropicalis	76.48	0.00e+00	1494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence