iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074399

Ensembl Protein ID

ENSOCUP00000013348.3

UniProt Accession

G1T9N3; G1T9N3_RABIT

Genbank Protein ID

ENSOCUP00000013348

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02006100

Gene Name

EML4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000015526.3	ENSOCUT00000015534.3	ENSOCUP00000013348.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-16	59.8	844	876

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H++ vt ++f  +d +l+++G+ D +i  W l 
   Q: 844  HSSHVTNVSFthNDsHLISTGGKDMSIIQWKLV 876
           9999*******988899*************985 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MDGFAGSLDD SISAASTSDV QDRLSALELR VQQQEDEITL LKAALADVLR RLAISEDHVA 60
SVKKSVPSKG QPGLREAISM SCITNGSGAN RKPGHSSSVS IARKETLSSA AKSGTEKKKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGTT TCGCCGGCAG CCTCGGTGAG TGCGGCGGGG GAGTCTTGCG TCTCCTGCTC 60
AGGGTGGGAA CCTCGTGCCC TCCACACACA GCCCAGGCCC TGCGCTCCAC CCCGCCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001465	Ailuropoda melanoleuca	91.54	0.00e+00	1787.00
IUUC-Apl-003728	Anas platyrhynchos	91.17	0.00e+00	1349.00
IUUC-Aca-004921	Anolis carolinensis	76.34	0.00e+00	1434.00
IUUC-Ame-011846	Astyanax mexicanus	80.69	0.00e+00	1438.00
IUUC-Bta-013457	Bos taurus	92.24	0.00e+00	1738.00
IUUC-Cel-018623	Caenorhabditis elegans	29.25	1.00e-81	297.00
IUUC-Cja-019963	Callithrix jacchus	91.21	0.00e+00	1703.00
IUUC-Cfa-020344	Canis familiaris	92.91	0.00e+00	1789.00
IUUC-Cpo-022426	Cavia porcellus	93.11	0.00e+00	1749.00
IUUC-Csa-023822	Chlorocebus sabaeus	93.32	0.00e+00	1748.00
IUUC-Cho-024398	Choloepus hoffmanni	94.80	0.00e+00	746.00
IUUC-Cin-025784	Ciona intestinalis	49.85	0.00e+00	665.00
IUUC-Csv-026305	Ciona savignyi	47.82	0.00e+00	646.00
IUUC-Dno-029822	Dasypus novemcinctus	91.80	0.00e+00	1717.00
IUUC-Dor-030881	Dipodomys ordii	91.96	0.00e+00	902.00
IUUC-Dme-032093	Drosophila melanogaster	33.94	9.00e-105	375.00
IUUC-Ete-032548	Echinops telfairi	74.55	0.00e+00	1297.00
IUUC-Eca-033255	Equus caballus	91.24	0.00e+00	1778.00
IUUC-Eeu-034609	Erinaceus europaeus	74.47	7.00e-140	491.00
IUUC-Fca-035637	Felis catus	93.85	0.00e+00	1779.00
IUUC-Fal-037030	Ficedula albicollis	90.30	0.00e+00	1604.00
IUUC-Gmo-038662	Gadus morhua	81.34	0.00e+00	1265.00
IUUC-Gga-041202	Gallus gallus	90.75	0.00e+00	1649.00
IUUC-Gac-041394	Gasterosteus aculeatus	74.69	0.00e+00	1353.00
IUUC-Ggo-044734	Gorilla gorilla	91.35	0.00e+00	1720.00
IUUC-Hsa-046616	Homo sapiens	91.95	0.00e+00	1773.00
IUUC-Lch-050585	Latimeria chalumnae	80.50	0.00e+00	1472.00
IUUC-Loc-052753	Lepisosteus oculatus	81.98	0.00e+00	1460.00
IUUC-Laf-054189	Loxodonta africana	88.91	0.00e+00	1659.00
IUUC-Mcc-055697	Macaca mulatta	94.38	0.00e+00	1778.00
IUUC-Meu-056664	Macropus eugenii	55.49	0.00e+00	771.00
IUUC-Mmr-060888	Microcebus murinus	90.97	0.00e+00	1707.00
IUUC-Mdo-062025	Monodelphis domestica	84.64	0.00e+00	1519.00
IUUC-Mmu-063591	Mus musculus	91.16	0.00e+00	1746.00
IUUC-Mpu-065718	Mustela putorius furo	93.62	0.00e+00	1800.00
IUUC-Mlu-068068	Myotis lucifugus	90.45	0.00e+00	1729.00
IUUC-Nle-069281	Nomascus leucogenys	90.54	0.00e+00	1674.00
IUUC-Opr-070938	Ochotona princeps	71.13	0.00e+00	1251.00
IUUC-Ont-071488	Oreochromis niloticus	73.10	0.00e+00	1317.00
IUUC-Oan-073561	Ornithorhynchus anatinus	73.20	0.00e+00	1001.00
IUUC-Ola-086551	Oryzias latipes	73.55	0.00e+00	1305.00
IUUC-Oga-088783	Otolemur garnettii	95.23	0.00e+00	1813.00
IUUC-Oar-089716	Ovis aries	93.51	0.00e+00	1732.00
IUUC-Ptr-090942	Pan troglodytes	89.53	0.00e+00	1702.00
IUUC-Pan-091831	Papio anubis	94.49	0.00e+00	1779.00
IUUC-Psi-093094	Pelodiscus sinensis	90.41	0.00e+00	1687.00
IUUC-Pma-094555	Petromyzon marinus	51.62	0.00e+00	715.00
IUUC-Pfo-097066	Poecilia formosa	69.57	0.00e+00	1267.00
IUUC-Pab-098351	Pongo abelii	91.25	0.00e+00	1720.00
IUUC-Pva-102783	Pteropus vampyrus	80.78	0.00e+00	1511.00
IUUC-Rno-105412	Rattus norvegicus	90.35	0.00e+00	1647.00
IUUC-Sha-106597	Sarcophilus harrisii	89.35	0.00e+00	1675.00
IUUC-Sar-113748	Sorex araneus	75.14	0.00e+00	1342.00
IUUC-Ssc-115740	Sus scrofa	91.08	0.00e+00	1731.00
IUUC-Tgu-116696	Taeniopygia guttata	85.85	0.00e+00	1560.00
IUUC-Tru-118506	Takifugu rubripes	73.73	0.00e+00	1338.00
IUUC-Tsy-119375	Tarsius syrichta	81.93	0.00e+00	1548.00
IUUC-Tni-120392	Tetraodon nigroviridis	69.27	0.00e+00	1210.00
IUUC-Tbe-127468	Tupaia belangeri	84.21	0.00e+00	1571.00
IUUC-Ttr-128746	Tursiops truncatus	86.30	0.00e+00	1702.00
IUUC-Vpa-130697	Vicugna pacos	90.23	0.00e+00	1728.00
IUUC-Xtr-132731	Xenopus tropicalis	81.82	0.00e+00	1563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence