iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000031325.5	ENSRNOT00000057572.4	ENSRNOP00000054381.4
ENSRNOG00000031325.5	ENSRNOT00000091023.1	ENSRNOP00000071079.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	6.50e-15	55.2	422	476

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 4    ekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           ekv ++ydy+  +ddeL++k+G +++vi  +++d gW +g    +   GlfP n+ve +
   Q: 422  EKVVAIYDYTKDKDDELSFKEGAIIYVI--KKNDDGWFEG--VCNRVTGLFPGNYVESI 476
           789*************************..99********..79************987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAELQMLLEE EIPSGKRALI ESYQNLTRVA DYCENNYIQA TDKRKALEET KAYTTQSLAS 60
VAYQINALAN NVLQLLDIQA SQLRRMESSI NHISQTVDIH KEKVARREIG ILTTNKNTSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCGTCGGA CTCAGCTGCC TCTGTCTCTT TAACGCGAGA GGAAGCGATG CGGAGGGGTG 60
GAAAATGGCA GAGCTGCAGA TGTTACTAGA GGAGGAGATC CCGTCTGGCA AGAGGGCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR028457--ABI
IPR028456--ABI1/ABI2
IPR012849--Abl-interactor_HHR_dom
IPR001452--SH3_domain
IPR000727--T_SNARE_dom

PROSITE

PS50002--SH3
PS50192--T_SNARE

Pfam

PF07815--Abi_HHR
PF00018--SH3_1

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0030175--C:filopodium
GO:0030027--C:lamellipodium
GO:0043005--C:neuron projection
GO:0031209--C:SCAR complex
GO:0030296--F:protein tyrosine kinase activator activity
GO:0008154--P:actin polymerization or depolymerization
GO:0048813--P:dendrite morphogenesis
GO:0072673--P:lamellipodium morphogenesis
GO:0035855--P:megakaryocyte development
GO:0018108--P:peptidyl-tyrosine phosphorylation
GO:0001756--P:somitogenesis

KEGG

rno:79249

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001375	Ailuropoda melanoleuca	91.36	0.00e+00	718.00
IUUC-Apl-003291	Anas platyrhynchos	89.98	0.00e+00	705.00
IUUC-Aca-004955	Anolis carolinensis	94.63	0.00e+00	645.00
IUUC-Ame-011140	Astyanax mexicanus	63.37	8.00e-141	493.00
IUUC-Bta-013104	Bos taurus	69.23	6.00e-154	536.00
IUUC-Cel-018141	Caenorhabditis elegans	49.34	9.00e-40	157.00
IUUC-Cja-019099	Callithrix jacchus	92.72	0.00e+00	737.00
IUUC-Cfa-020201	Canis familiaris	92.52	0.00e+00	736.00
IUUC-Cpo-021955	Cavia porcellus	97.30	0.00e+00	723.00
IUUC-Csa-024155	Chlorocebus sabaeus	92.72	0.00e+00	737.00
IUUC-Cho-024588	Choloepus hoffmanni	96.67	1.00e-126	446.00
IUUC-Cin-025769	Ciona intestinalis	55.88	3.00e-66	246.00
IUUC-Csv-026114	Ciona savignyi	61.29	1.00e-66	247.00
IUUC-Dre-027960	Danio rerio	78.59	2.00e-175	608.00
IUUC-Dno-029586	Dasypus novemcinctus	98.75	0.00e+00	751.00
IUUC-Dme-031578	Drosophila melanogaster	48.18	5.00e-51	195.00
IUUC-Ete-032286	Echinops telfairi	91.32	0.00e+00	734.00
IUUC-Eca-033716	Equus caballus	91.91	0.00e+00	657.00
IUUC-Eeu-034628	Erinaceus europaeus	74.72	4.00e-105	374.00
IUUC-Fca-036186	Felis catus	91.14	0.00e+00	721.00
IUUC-Fal-037526	Ficedula albicollis	91.70	0.00e+00	728.00
IUUC-Gmo-039109	Gadus morhua	75.15	4.00e-174	604.00
IUUC-Gga-040990	Gallus gallus	91.34	0.00e+00	728.00
IUUC-Gac-042525	Gasterosteus aculeatus	81.35	0.00e+00	673.00
IUUC-Ggo-044789	Gorilla gorilla	91.94	0.00e+00	724.00
IUUC-Hsa-045845	Homo sapiens	92.72	0.00e+00	737.00
IUUC-Itr-048893	Ictidomys tridecemlineatus	99.13	2.00e-111	395.00
IUUC-Lch-050579	Latimeria chalumnae	84.98	1.00e-146	512.00
IUUC-Loc-052683	Lepisosteus oculatus	97.75	5.00e-133	468.00
IUUC-Laf-054032	Loxodonta africana	97.92	0.00e+00	745.00
IUUC-Mcc-055180	Macaca mulatta	92.72	0.00e+00	737.00
IUUC-Meu-056378	Macropus eugenii	79.67	5.00e-101	361.00
IUUC-Mga-059287	Meleagris gallopavo	83.65	0.00e+00	631.00
IUUC-Mmr-061282	Microcebus murinus	92.72	0.00e+00	737.00
IUUC-Mdo-062996	Monodelphis domestica	97.51	0.00e+00	738.00
IUUC-Mmu-063875	Mus musculus	99.58	0.00e+00	747.00
IUUC-Mpu-065785	Mustela putorius furo	92.31	0.00e+00	739.00
IUUC-Mlu-068146	Myotis lucifugus	95.46	0.00e+00	680.00
IUUC-Nle-070077	Nomascus leucogenys	97.51	0.00e+00	731.00
IUUC-Opr-070618	Ochotona princeps	77.61	2.00e-97	349.00
IUUC-Ont-072203	Oreochromis niloticus	80.56	0.00e+00	629.00
IUUC-Oan-073650	Ornithorhynchus anatinus	96.26	0.00e+00	734.00
IUUC-Ocu-074682	Oryctolagus cuniculus	98.54	0.00e+00	751.00
IUUC-Ola-086642	Oryzias latipes	90.38	2.00e-118	419.00
IUUC-Oga-088619	Otolemur garnettii	84.40	1.00e-152	532.00
IUUC-Oar-089983	Ovis aries	98.75	0.00e+00	751.00
IUUC-Ptr-091652	Pan troglodytes	92.52	0.00e+00	736.00
IUUC-Pan-091799	Papio anubis	98.75	0.00e+00	751.00
IUUC-Psi-093802	Pelodiscus sinensis	96.05	0.00e+00	724.00
IUUC-Pma-094746	Petromyzon marinus	64.49	1.00e-118	420.00
IUUC-Pfo-097441	Poecilia formosa	82.83	0.00e+00	642.00
IUUC-Pab-098208	Pongo abelii	98.75	0.00e+00	751.00
IUUC-Pca-100439	Procavia capensis	59.58	3.00e-70	259.00
IUUC-Pva-102520	Pteropus vampyrus	91.73	0.00e+00	723.00
IUUC-Sha-106615	Sarcophilus harrisii	94.74	0.00e+00	640.00
IUUC-Sar-113140	Sorex araneus	84.65	0.00e+00	655.00
IUUC-Ssc-115676	Sus scrofa	98.46	2.00e-75	274.00
IUUC-Tgu-117093	Taeniopygia guttata	91.04	0.00e+00	652.00
IUUC-Tru-117869	Takifugu rubripes	81.57	0.00e+00	640.00
IUUC-Tsy-119104	Tarsius syrichta	85.29	2.00e-167	581.00
IUUC-Tni-120003	Tetraodon nigroviridis	80.48	0.00e+00	630.00
IUUC-Tbe-127508	Tupaia belangeri	88.36	0.00e+00	667.00
IUUC-Ttr-129105	Tursiops truncatus	91.46	0.00e+00	686.00
IUUC-Vpa-130514	Vicugna pacos	91.49	0.00e+00	639.00
IUUC-Xtr-131805	Xenopus tropicalis	82.68	0.00e+00	691.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence