iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007306

UUCD1 version

UUC-ArT-01675

Ensembl Protein ID

AT2G29640.1

UniProt Accession

O82391; JOSL_ARATH

Genbank Protein ID

AAC35231.1; AEC08284.1

Protein Name

Josephin-like protein

Genbank Nucleotide ID

AC005496; CP002685

Gene Name

At2g29640; T27A16.26

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G29640	AT2G29640.1	AT2G29640.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Josephin	39.41	4.00e-28	123.00	IUUC-Hsa-046522

Active Site

Position(s)	Description	Evidence
18	Nucleophile	ECO:0000255\|PROSITE-ProRule:PRU00331}
129	Proton acceptor	ECO:0000255\|PROSITE-ProRule:PRU00331}

Organism

Arabidopsis thaliana

Functional Description
(View)

May act as a deubiquitinating enzyme.

Protein Sequence
(Fasta)

MADSESKIYH ERQRLQFCLL HCLNNLFQDK DAFTKESLNS IAEKLETNDP NKETWTPLSF 60
VLKPHHNTIT GNYDVNVMIT ALEGKGKSVV WHDKRIGASS IDLDDADTLM GIVLNVPVKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGATT CCGAATCTAA AATCTATCAC GAACGACAAC GATTACAATT TTGCCTCTTG 60
CACTGCCTCA ACAATCTATT TCAGGTGATT GATCCAATTT CTATTTCAAT CTCAAAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR006155--Josephin

PROSITE

PS50957--JOSEPHIN

Pfam

PF02099--Josephin

SMART

SM01246--Josephin

Gene Ontology

GO:0000166--F:nucleotide binding
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination

KEGG

ath:AT2G29640

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000785	Aegilops tauschii	60.49	2.00e-58	217.00
IUUC-Aml-002429	Ailuropoda melanoleuca	40.12	5.00e-31	126.00
IUUC-Atr-002584	Amborella trichopoda	61.96	5.00e-56	210.00
IUUC-Apl-003240	Anas platyrhynchos	40.36	4.00e-30	123.00
IUUC-Aca-004262	Anolis carolinensis	39.52	1.00e-29	122.00
IUUC-Aly-005621	Arabidopsis lyrata	75.94	4.00e-138	483.00
IUUC-Ame-010835	Astyanax mexicanus	39.55	6.00e-31	126.00
IUUC-Bta-012918	Bos taurus	38.55	1.00e-24	105.00
IUUC-Bdi-014128	Brachypodium distachyon	60.49	4.00e-59	219.00
IUUC-Bol-015647	Brassica oleracea	85.88	5.00e-84	302.00
IUUC-Bra-017811	Brassica rapa	77.51	5.00e-75	272.00
IUUC-Cel-018568	Caenorhabditis elegans	35.40	2.00e-25	107.00
IUUC-Cja-019837	Callithrix jacchus	38.55	5.00e-24	103.00
IUUC-Cfa-021002	Canis familiaris	40.12	5.00e-31	126.00
IUUC-Cpo-021340	Cavia porcellus	36.81	3.00e-24	103.00
IUUC-Csa-023069	Chlorocebus sabaeus	37.95	7.00e-24	102.00
IUUC-Cho-025019	Choloepus hoffmanni	40.72	6.00e-31	126.00
IUUC-Cin-025666	Ciona intestinalis	40.79	2.00e-27	115.00
IUUC-Csv-026011	Ciona savignyi	39.61	4.00e-27	114.00
IUUC-Dre-028459	Danio rerio	38.42	2.00e-30	124.00
IUUC-Dno-029803	Dasypus novemcinctus	40.12	1.00e-30	125.00
IUUC-Dor-030570	Dipodomys ordii	36.02	6.00e-22	96.30
IUUC-Dme-032124	Drosophila melanogaster	37.28	2.00e-24	104.00
IUUC-Ete-032777	Echinops telfairi	38.92	1.00e-29	121.00
IUUC-Eca-034395	Equus caballus	40.12	6.00e-31	126.00
IUUC-Eeu-035075	Erinaceus europaeus	54.05	3.00e-08	50.80
IUUC-Fca-035819	Felis catus	40.12	5.00e-31	126.00
IUUC-Fal-037330	Ficedula albicollis	40.36	2.00e-30	124.00
IUUC-Gmo-038979	Gadus morhua	40.36	2.00e-28	118.00
IUUC-Gga-040456	Gallus gallus	39.76	1.00e-29	122.00
IUUC-Gac-041797	Gasterosteus aculeatus	42.77	2.00e-30	124.00
IUUC-Gma-043620	Glycine max	65.68	2.00e-67	247.00
IUUC-Ggo-045508	Gorilla gorilla	38.24	1.00e-24	105.00
IUUC-Hsa-046522	Homo sapiens	38.24	1.00e-24	105.00
IUUC-Hvu-047184	Hordeum vulgare	60.49	5.00e-58	216.00
IUUC-Itr-048432	Ictidomys tridecemlineatus	39.52	4.00e-30	123.00
IUUC-Lch-049682	Latimeria chalumnae	38.10	2.00e-28	117.00
IUUC-Lpe-051421	Leersia perrieri	62.66	7.00e-61	225.00
IUUC-Loc-051775	Lepisosteus oculatus	41.57	1.00e-29	122.00
IUUC-Laf-054283	Loxodonta africana	40.12	5.00e-30	123.00
IUUC-Mcc-054840	Macaca mulatta	37.95	8.00e-24	102.00
IUUC-Meu-056650	Macropus eugenii	40.96	7.00e-31	125.00
IUUC-Mtr-058745	Medicago truncatula	62.35	2.00e-65	240.00
IUUC-Mga-059703	Meleagris gallopavo	39.76	1.00e-29	122.00
IUUC-Mdo-062114	Monodelphis domestica	40.12	1.00e-30	125.00
IUUC-Mmu-063463	Mus musculus	37.65	1.00e-24	105.00
IUUC-Mac-065631	Musa acuminata	61.88	9.00e-60	223.00
IUUC-Mpu-065845	Mustela putorius furo	40.12	6.00e-31	126.00
IUUC-Mlu-067564	Myotis lucifugus	39.52	6.00e-30	122.00
IUUC-Nle-069739	Nomascus leucogenys	38.55	4.00e-24	103.00
IUUC-Opr-070945	Ochotona princeps	32.74	6.00e-21	93.20
IUUC-Ont-071439	Oreochromis niloticus	41.57	7.00e-31	126.00
IUUC-Oan-073122	Ornithorhynchus anatinus	38.26	4.00e-17	79.70
IUUC-Ocu-074128	Oryctolagus cuniculus	35.34	3.00e-14	69.30
IUUC-Oba-075401	Oryza barthii	62.35	4.00e-61	226.00
IUUC-Obr-076916	Oryza brachyantha	62.96	8.00e-60	222.00
IUUC-Ogl-077194	Oryza glaberrima	62.35	4.00e-61	226.00
IUUC-Ogu-078532	Oryza glumaepatula	62.35	4.00e-61	226.00
IUUC-Oin-079562	Oryza indica	62.18	2.00e-58	216.00
IUUC-Olo-080503	Oryza longistaminata	62.58	2.00e-61	227.00
IUUC-Ome-081997	Oryza meridionalis	62.96	3.00e-61	226.00
IUUC-Oni-082854	Oryza nivara	62.35	1.00e-60	225.00
IUUC-Opu-083984	Oryza punctata	61.73	4.00e-60	223.00
IUUC-Oru-084655	Oryza rufipogon	62.35	5.00e-61	226.00
IUUC-Osa-085854	Oryza sativa	62.35	4.00e-61	226.00
IUUC-Ola-086805	Oryzias latipes	37.85	1.00e-29	121.00
IUUC-Oga-088741	Otolemur garnettii	39.18	2.00e-21	94.70
IUUC-Oar-089548	Ovis aries	38.55	7.00e-25	106.00
IUUC-Ptr-090936	Pan troglodytes	38.92	2.00e-29	121.00
IUUC-Pan-092144	Papio anubis	37.95	8.00e-24	102.00
IUUC-Psi-093448	Pelodiscus sinensis	40.12	2.00e-30	124.00
IUUC-Ppa-095444	Physcomitrella patens	45.76	1.00e-45	175.00
IUUC-Pfo-096711	Poecilia formosa	42.17	1.00e-30	125.00
IUUC-Pab-097628	Pongo abelii	38.92	1.00e-29	121.00
IUUC-Pop-099793	Populus trichocarpa	56.61	3.00e-56	210.00
IUUC-Pca-100200	Procavia capensis	36.90	6.00e-26	109.00
IUUC-Ppe-102087	Prunus persica	70.12	5.00e-69	252.00
IUUC-Pva-102259	Pteropus vampyrus	40.12	5.00e-31	126.00
IUUC-Rno-105045	Rattus norvegicus	40.12	3.00e-30	124.00
IUUC-Sha-107606	Sarcophilus harrisii	40.72	6.00e-31	126.00
IUUC-Smo-109138	Selaginella moellendorffii	48.04	4.00e-26	109.00
IUUC-Sit-110826	Setaria italica	60.49	7.00e-60	222.00
IUUC-Sly-111452	Solanum lycopersicum	65.45	4.00e-65	239.00
IUUC-Stu-112215	Solanum tuberosum	66.87	1.00e-65	241.00
IUUC-Sbi-114786	Sorghum bicolor	65.43	1.00e-62	231.00
IUUC-Ssc-115663	Sus scrofa	39.52	2.00e-30	124.00
IUUC-Tgu-117374	Taeniopygia guttata	40.36	1.00e-30	125.00
IUUC-Tru-118030	Takifugu rubripes	40.96	8.00e-31	126.00
IUUC-Tsy-119298	Tarsius syrichta	40.12	7.00e-31	125.00
IUUC-Tni-119797	Tetraodon nigroviridis	40.36	2.00e-29	120.00
IUUC-Tca-121220	Theobroma cacao	47.52	1.00e-81	295.00
IUUC-Tae-123012	Triticum aestivum	60.49	2.00e-58	217.00
IUUC-Tur-126618	Triticum urartu	57.14	1.00e-45	175.00
IUUC-Tbe-127896	Tupaia belangeri	39.52	4.00e-30	123.00
IUUC-Ttr-128523	Tursiops truncatus	38.92	8.00e-30	122.00
IUUC-Vpa-130184	Vicugna pacos	37.35	2.00e-27	114.00
IUUC-Vvi-131246	Vitis vinifera	68.90	8.00e-69	251.00
IUUC-Xtr-131903	Xenopus tropicalis	38.32	2.00e-27	114.00
IUUC-Xma-134235	Xiphophorus maculatus	42.17	4.00e-30	123.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence