iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048660

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01073771

Gene Name

PDZRN3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000020243.1	ENSSTOT00000024718.1	ENSSTOP00000020515.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-06	28.0	18	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCP.lC 45
           Ca+C+  ++d pl++pCgHvf+a C+  w        +e +CP  C
   Q: 18   CALCHKVLED-PLTTPCGHVFCAGCVLPW------VVQEGSCPaRC 56
           **********.******************......88888888445 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MGFELDRFDG DVDPDLKCAL CHKVLEDPLT TPCGHVFCAG CVLPWVVQEG SCPARCRGRL 60
SAKELNHVLP LKRLILKLDI KCAHAARGCG RVVKLQALPE HLERCDFAPA RCRHAGCGQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTCG AGCTAGACCG CTTCGATGGC GACGTGGACC CGGACCTGAA GTGCGCGCTG 60
TGTCACAAAG TCCTGGAGGA CCCTCTGACC ACGCCGTGCG GCCACGTCTT CTGCGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0031594--C:neuromuscular junction
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007528--P:neuromuscular junction development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001910	Ailuropoda melanoleuca	86.23	0.00e+00	1444.00
IUUC-Apl-003623	Anas platyrhynchos	81.58	0.00e+00	1241.00
IUUC-Ame-011171	Astyanax mexicanus	49.48	0.00e+00	720.00
IUUC-Bta-012364	Bos taurus	88.21	0.00e+00	1789.00
IUUC-Cja-019726	Callithrix jacchus	86.70	0.00e+00	1354.00
IUUC-Cpo-021680	Cavia porcellus	89.25	0.00e+00	1785.00
IUUC-Csa-023684	Chlorocebus sabaeus	89.68	0.00e+00	1817.00
IUUC-Cho-024555	Choloepus hoffmanni	75.99	2.00e-108	386.00
IUUC-Dre-027462	Danio rerio	71.64	0.00e+00	1410.00
IUUC-Dno-029974	Dasypus novemcinctus	97.59	5.00e-47	179.00
IUUC-Dor-031125	Dipodomys ordii	87.07	0.00e+00	1656.00
IUUC-Ete-032745	Echinops telfairi	80.80	0.00e+00	869.00
IUUC-Eca-034276	Equus caballus	86.92	0.00e+00	1376.00
IUUC-Fal-037334	Ficedula albicollis	76.41	0.00e+00	1484.00
IUUC-Gmo-038706	Gadus morhua	70.54	0.00e+00	1345.00
IUUC-Gga-040586	Gallus gallus	79.61	0.00e+00	1516.00
IUUC-Gac-041605	Gasterosteus aculeatus	67.96	0.00e+00	1322.00
IUUC-Ggo-044706	Gorilla gorilla	89.59	0.00e+00	1819.00
IUUC-Hsa-046677	Homo sapiens	89.49	0.00e+00	1819.00
IUUC-Lch-049637	Latimeria chalumnae	68.40	1.00e-129	455.00
IUUC-Loc-052305	Lepisosteus oculatus	72.47	0.00e+00	1466.00
IUUC-Mcc-055573	Macaca mulatta	89.77	0.00e+00	1820.00
IUUC-Meu-056805	Macropus eugenii	77.67	0.00e+00	1541.00
IUUC-Mdo-062581	Monodelphis domestica	81.87	0.00e+00	1638.00
IUUC-Mmu-063597	Mus musculus	89.56	0.00e+00	1806.00
IUUC-Mpu-065685	Mustela putorius furo	89.80	0.00e+00	1382.00
IUUC-Mlu-067150	Myotis lucifugus	76.14	0.00e+00	1012.00
IUUC-Nle-068997	Nomascus leucogenys	89.53	0.00e+00	1787.00
IUUC-Ont-071534	Oreochromis niloticus	68.59	0.00e+00	1321.00
IUUC-Ola-086381	Oryzias latipes	68.98	0.00e+00	1357.00
IUUC-Oga-089068	Otolemur garnettii	89.83	0.00e+00	1796.00
IUUC-Oar-089252	Ovis aries	97.78	6.00e-79	286.00
IUUC-Pan-092366	Papio anubis	89.68	0.00e+00	1819.00
IUUC-Psi-093611	Pelodiscus sinensis	54.90	2.00e-81	295.00
IUUC-Pfo-096576	Poecilia formosa	66.99	8.00e-123	432.00
IUUC-Pab-098239	Pongo abelii	89.49	0.00e+00	1817.00
IUUC-Pca-100484	Procavia capensis	94.95	0.00e+00	859.00
IUUC-Pva-103202	Pteropus vampyrus	52.34	0.00e+00	841.00
IUUC-Rno-105931	Rattus norvegicus	89.28	0.00e+00	1807.00
IUUC-Spo-108335	Schizosaccharomyces pombe	44.44	2.00e-08	53.50
IUUC-Tgu-116615	Taeniopygia guttata	78.83	2.00e-108	384.00
IUUC-Tru-118175	Takifugu rubripes	70.24	0.00e+00	1372.00
IUUC-Tsy-119569	Tarsius syrichta	82.94	0.00e+00	1365.00
IUUC-Tbe-127819	Tupaia belangeri	82.46	0.00e+00	1286.00
IUUC-Ttr-128328	Tursiops truncatus	86.57	0.00e+00	1409.00
IUUC-Xtr-132339	Xenopus tropicalis	72.86	0.00e+00	1455.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence