iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000077

Ensembl Protein ID

EMT23535

UniProt Accession

M8BF11; M8BF11_AEGTA

Genbank Protein ID

EMT23535.1

Protein Name

Lysine-specific demethylase 5B

Genbank Nucleotide ID

KD519845

Gene Name

F775_03039

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_03039	EMT23535	EMT23535

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.40e-08	34.8	1108	1154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC+vCg   +de s++ C++C++ +H  Cl+++     p+ + w+Cp+C 
   Q: 1108 VCKVCGIDRDDE-SVLLCDECDSEYHTYCLNPP-LARIPQGD-WFCPSCM 1154
           8*****999977.7*******************.*******7.******6 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MFSAYGNHFM PAFGLPHCFS IRQQFPPVEQ NFIADGNIEQ RSNHTRRRRR DFPQTSALPK 60
FSEKHEFVGL PVQYQDFFIT SLGEIDKQAS YHNCHQIWPV GFTSYWHDRV TGSLFECEVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCAGTG CATGTGTGGC CACTTAGGCA TAGTATGTGT TTATAAAGGG AAATTTAATT 60
CCAGTTCCAA AAAATTATGG GTCATGCTAA CATTTTGAAG CTATACCTGT CTGGTCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018501--DDT_dom
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS51543--FYRC
PS51542--FYRN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF15612--WHIM1
PF15613--WSD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008168--F:methyltransferase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_03039

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002838	Amborella trichopoda	45.48	4.00e-175	609.00
IUUC-Aly-006097	Arabidopsis lyrata	41.43	4.00e-147	516.00
IUUC-Ath-007218	Arabidopsis thaliana	41.76	5.00e-151	529.00
IUUC-Bgr-012184	Blumeria graminis	39.74	7.00e-10	58.50
IUUC-Bdi-014742	Brachypodium distachyon	65.28	0.00e+00	1238.00
IUUC-Bol-015336	Brassica oleracea	40.91	6.00e-142	499.00
IUUC-Bra-017998	Brassica rapa	41.19	5.00e-142	499.00
IUUC-Dor-030192	Dipodomys ordii	56.00	2.00e-12	69.70
IUUC-Fox-037887	Fusarium oxysporum	44.44	2.00e-08	53.90
IUUC-Ggr-039838	Gaeumannomyces graminis	53.33	2.00e-10	60.10
IUUC-Gma-042823	Glycine max	44.26	3.00e-176	612.00
IUUC-Hvu-047583	Hordeum vulgare	91.85	0.00e+00	1742.00
IUUC-Lpe-050785	Leersia perrieri	67.34	0.00e+00	1233.00
IUUC-Mor-056964	Magnaporthe oryzae	53.33	6.00e-10	58.50
IUUC-Mtr-058285	Medicago truncatula	43.06	2.00e-156	547.00
IUUC-Mvi-060436	Microbotryum violaceum	46.67	5.00e-10	58.90
IUUC-Mac-065069	Musa acuminata	53.90	5.00e-161	562.00
IUUC-Ncr-068647	Neurospora crassa	34.15	3.00e-09	56.60
IUUC-Oba-075854	Oryza barthii	73.75	0.00e+00	1395.00
IUUC-Obr-076343	Oryza brachyantha	72.48	0.00e+00	1329.00
IUUC-Ogl-077886	Oryza glaberrima	61.41	0.00e+00	1196.00
IUUC-Ogu-078887	Oryza glumaepatula	73.75	0.00e+00	1395.00
IUUC-Olo-080668	Oryza longistaminata	73.75	0.00e+00	1392.00
IUUC-Ome-081800	Oryza meridionalis	73.86	0.00e+00	1398.00
IUUC-Oni-082593	Oryza nivara	73.75	0.00e+00	1394.00
IUUC-Opu-083363	Oryza punctata	73.43	0.00e+00	1393.00
IUUC-Oru-084298	Oryza rufipogon	73.65	0.00e+00	1392.00
IUUC-Osa-085487	Oryza sativa	62.06	0.00e+00	1187.00
IUUC-Olu-087752	Ostreococcus lucimarinus	41.82	2.00e-08	50.80
IUUC-Ppa-095893	Physcomitrella patens	38.82	5.00e-54	207.00
IUUC-Ppe-101198	Prunus persica	46.39	0.00e+00	661.00
IUUC-Smo-108843	Selaginella moellendorffii	45.83	5.00e-10	59.30
IUUC-Sit-110633	Setaria italica	68.03	0.00e+00	1222.00
IUUC-Tsy-119386	Tarsius syrichta	53.33	1.00e-12	68.90
IUUC-Tca-121595	Theobroma cacao	41.88	4.00e-168	586.00
IUUC-Tae-123930	Triticum aestivum	94.72	0.00e+00	1838.00
IUUC-Tur-126242	Triticum urartu	90.46	0.00e+00	3526.00
IUUC-Vvi-130929	Vitis vinifera	45.96	0.00e+00	682.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence