iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113785

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G256700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g029180	Sb02g029180.1	Sb02g029180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.30e-70	239.1	214	669

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqE 94
           +Gl NlgNtC++N+vLQ+L+++  lr+ +l            + ++g+l++sl+klf+e    ++  +a sp++l+++++++ ++f+gy+ qD++E
   Q: 214  KGLPNLGNTCFFNAVLQSLLAVDRLRRKMLG---P-------DVRTGALAMSLKKLFAETSasNHAGGALSPKNLFSSICSKYPQFRGYQMQDSHE 299
           59*****************************...2.......345789************97788888**************************** PP
   S: 95   flaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke..... 185
           +l+++ld+l++e +                e+ + +ee  +   +++++ +F+gql+s++   ec ++s+++++fldlslpvp+++   k+     
   Q: 300  LLRCFLDGLRTEET----------------EARKLEEEASDAGVPTIVDSIFGGQLSSTVSSTECSHSSVKHDQFLDLSLPVPSRRPPTKSvsspp 379
           ***********992................2333445678899****************************************99987777999** PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 380  akrtkqsirdrnksrrygkvparaspsveskeqiqtiaernnsqipgseleqvvsvsekeaepsgcsescgsvsnqeqnattnvensicwldyvad 475
           ************************************************************************************************ PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 476  vdetkseildsadstgtgqiwecrdatdgplhpqddalpkeqilgsehsgentvdddaslqtvillpykelgttakerdetiensynsecevpplv 571
           ************************************************************************************************ PP
   S: 186  ......................................................................slqdcLesftkeeelegenkyycekc 211
                                                                                 s++ cL+ +t++e l   + + ce+c
   Q: 572  vvspvtenntqpgycgdveqddyiglgdmfnepevtsevkkeaskvedidvmawssnsaddevddsnapvSVEGCLALYTEPELLS--EPWLCEHC 665
           *************************************************************************************8..59****** PP
   S: 212  kkkq 215
           ++  
   Q: 666  TNAA 669
           9755 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGKKVKAKPK NSRKAHERDL PASSSEVGPG DAASQDASHS AEEAAASASG REHCGHYGHD 60
NAHLDKVLLE ILSSKHVASC EHCREDAPRK KGGAVGKQKK KGGTSKGATA KAQAKADKSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGA AGGTGAAGGC TAAGCCCAAG AACTCGCGGA AAGCGCATGA ACGGGATCTT 60
CCAGCCTCAT CCTCGGAGGT TGGACCTGGT GATGCGGCAT CGCAGGATGC AAGCCACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g029180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	65.17	0.00e+00	1178.00
IUUC-Aml-001931	Ailuropoda melanoleuca	32.24	3.00e-33	136.00
IUUC-Atr-003015	Amborella trichopoda	30.43	2.00e-64	240.00
IUUC-Apl-004145	Anas platyrhynchos	29.48	4.00e-30	125.00
IUUC-Aca-004314	Anolis carolinensis	29.65	3.00e-28	119.00
IUUC-Aly-005494	Arabidopsis lyrata	36.61	4.00e-50	192.00
IUUC-Ath-006732	Arabidopsis thaliana	35.06	3.00e-54	206.00
IUUC-Ame-011659	Astyanax mexicanus	35.15	7.00e-26	112.00
IUUC-Bta-013362	Bos taurus	30.61	6.00e-31	128.00
IUUC-Bdi-014465	Brachypodium distachyon	64.77	0.00e+00	1170.00
IUUC-Bol-015191	Brassica oleracea	30.98	2.00e-61	229.00
IUUC-Bra-017226	Brassica rapa	30.87	5.00e-62	231.00
IUUC-Cja-019177	Callithrix jacchus	31.03	4.00e-33	135.00
IUUC-Cfa-020051	Canis familiaris	32.24	6.00e-32	132.00
IUUC-Cpo-021886	Cavia porcellus	30.70	6.00e-31	128.00
IUUC-Csa-024103	Chlorocebus sabaeus	31.03	5.00e-33	135.00
IUUC-Cin-025775	Ciona intestinalis	33.33	2.00e-16	77.40
IUUC-Csv-026075	Ciona savignyi	31.48	2.00e-18	87.00
IUUC-Cme-027348	Cyanidioschyzon merolae	36.03	1.00e-18	87.00
IUUC-Dre-028388	Danio rerio	27.52	3.00e-31	129.00
IUUC-Dno-029409	Dasypus novemcinctus	30.86	6.00e-31	128.00
IUUC-Dor-030443	Dipodomys ordii	40.00	1.00e-25	110.00
IUUC-Ete-032807	Echinops telfairi	40.67	3.00e-26	112.00
IUUC-Eca-033479	Equus caballus	31.78	1.00e-33	137.00
IUUC-Eeu-034835	Erinaceus europaeus	38.06	2.00e-25	110.00
IUUC-Fca-036320	Felis catus	31.99	7.00e-34	138.00
IUUC-Fal-037029	Ficedula albicollis	29.41	2.00e-32	133.00
IUUC-Gmo-039480	Gadus morhua	26.72	5.00e-28	118.00
IUUC-Gga-040527	Gallus gallus	28.13	2.00e-29	123.00
IUUC-Gac-042343	Gasterosteus aculeatus	35.15	5.00e-27	115.00
IUUC-Gma-044402	Glycine max	31.21	3.00e-79	289.00
IUUC-Ggo-045598	Gorilla gorilla	30.75	4.00e-32	132.00
IUUC-Hsa-046598	Homo sapiens	31.03	1.00e-32	134.00
IUUC-Hvu-047146	Hordeum vulgare	65.14	0.00e+00	1194.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	31.49	1.00e-33	137.00
IUUC-Lch-050536	Latimeria chalumnae	31.33	1.00e-30	127.00
IUUC-Lpe-050703	Leersia perrieri	63.47	0.00e+00	1218.00
IUUC-Loc-051814	Lepisosteus oculatus	29.71	3.00e-31	129.00
IUUC-Laf-053732	Loxodonta africana	30.92	8.00e-34	138.00
IUUC-Mcc-054661	Macaca mulatta	31.03	6.00e-33	135.00
IUUC-Meu-056256	Macropus eugenii	32.54	7.00e-20	92.00
IUUC-Mtr-057945	Medicago truncatula	40.41	3.00e-56	213.00
IUUC-Mla-059026	Melampsora laricipopulina	37.12	6.00e-18	85.10
IUUC-Mga-059551	Meleagris gallopavo	27.54	6.00e-31	128.00
IUUC-Mvi-060391	Microbotryum violaceum	33.91	2.00e-18	87.00
IUUC-Mmr-061747	Microcebus murinus	31.78	1.00e-33	137.00
IUUC-Mdo-062220	Monodelphis domestica	29.85	2.00e-29	123.00
IUUC-Mmu-063582	Mus musculus	35.81	5.00e-29	122.00
IUUC-Mac-064941	Musa acuminata	37.80	1.00e-108	386.00
IUUC-Mpu-066339	Mustela putorius furo	32.24	2.00e-32	133.00
IUUC-Mlu-067511	Myotis lucifugus	38.14	2.00e-32	133.00
IUUC-Nle-069252	Nomascus leucogenys	31.03	3.00e-33	136.00
IUUC-Opr-070969	Ochotona princeps	37.21	3.00e-30	126.00
IUUC-Ont-071786	Oreochromis niloticus	34.69	4.00e-27	115.00
IUUC-Oan-073656	Ornithorhynchus anatinus	31.85	8.00e-31	128.00
IUUC-Ocu-074704	Oryctolagus cuniculus	31.98	3.00e-31	129.00
IUUC-Oba-075094	Oryza barthii	64.96	0.00e+00	1263.00
IUUC-Obr-076743	Oryza brachyantha	64.96	0.00e+00	1224.00
IUUC-Ogl-077739	Oryza glaberrima	62.57	0.00e+00	997.00
IUUC-Ogu-078851	Oryza glumaepatula	64.68	0.00e+00	1262.00
IUUC-Oin-079402	Oryza indica	66.54	0.00e+00	1264.00
IUUC-Olo-080431	Oryza longistaminata	66.10	0.00e+00	1224.00
IUUC-Ome-081580	Oryza meridionalis	64.52	0.00e+00	1263.00
IUUC-Oni-082644	Oryza nivara	64.81	0.00e+00	1266.00
IUUC-Opu-083452	Oryza punctata	63.13	0.00e+00	1251.00
IUUC-Oru-084546	Oryza rufipogon	64.96	0.00e+00	1265.00
IUUC-Osa-085858	Oryza sativa	64.78	0.00e+00	1264.00
IUUC-Ola-086795	Oryzias latipes	32.24	8.00e-27	115.00
IUUC-Oga-088713	Otolemur garnettii	30.81	2.00e-32	133.00
IUUC-Oar-089971	Ovis aries	30.52	3.00e-31	129.00
IUUC-Ptr-091670	Pan troglodytes	30.75	1.00e-32	134.00
IUUC-Pan-092293	Papio anubis	31.03	6.00e-33	135.00
IUUC-Psi-093101	Pelodiscus sinensis	37.44	8.00e-29	121.00
IUUC-Ppa-095584	Physcomitrella patens	32.80	5.00e-41	162.00
IUUC-Pfo-097202	Poecilia formosa	36.87	8.00e-29	121.00
IUUC-Pab-098773	Pongo abelii	36.28	8.00e-31	127.00
IUUC-Pop-099588	Populus trichocarpa	32.10	1.00e-66	247.00
IUUC-Pca-101069	Procavia capensis	39.35	9.00e-27	114.00
IUUC-Ppe-101794	Prunus persica	33.53	3.00e-65	242.00
IUUC-Pva-103092	Pteropus vampyrus	39.35	9.00e-26	111.00
IUUC-Rno-105237	Rattus norvegicus	27.70	3.00e-30	126.00
IUUC-Sha-106889	Sarcophilus harrisii	30.15	2.00e-28	120.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	34.01	3.00e-18	86.70
IUUC-Spo-108149	Schizosaccharomyces pombe	38.32	6.00e-25	108.00
IUUC-Sit-110283	Setaria italica	82.72	0.00e+00	1679.00
IUUC-Sly-111487	Solanum lycopersicum	30.16	4.00e-70	258.00
IUUC-Stu-112499	Solanum tuberosum	32.97	2.00e-77	283.00
IUUC-Sar-113530	Sorex araneus	32.24	2.00e-32	133.00
IUUC-Ssc-116091	Sus scrofa	31.14	5.00e-31	129.00
IUUC-Tgu-117478	Taeniopygia guttata	28.97	1.00e-31	130.00
IUUC-Tru-118640	Takifugu rubripes	29.34	3.00e-27	116.00
IUUC-Tsy-118869	Tarsius syrichta	35.64	2.00e-24	107.00
IUUC-Tni-120015	Tetraodon nigroviridis	28.61	6.00e-31	128.00
IUUC-Tca-121701	Theobroma cacao	33.33	7.00e-73	268.00
IUUC-Tae-125785	Triticum aestivum	65.61	0.00e+00	1166.00
IUUC-Tur-126788	Triticum urartu	64.83	0.00e+00	1031.00
IUUC-Tbe-127309	Tupaia belangeri	35.71	2.00e-17	83.60
IUUC-Ttr-128271	Tursiops truncatus	31.32	3.00e-33	135.00
IUUC-Vpa-130674	Vicugna pacos	32.27	1.00e-33	137.00
IUUC-Xtr-131869	Xenopus tropicalis	30.79	3.00e-29	123.00
IUUC-Xma-134195	Xiphophorus maculatus	29.65	8.00e-30	124.00
IUUC-Zma-135157	Zea mays	87.99	0.00e+00	1740.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence