iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__2585__AT3G61180.1	fgenesh2_kg.5__2585__AT3G61180.1	fgenesh2_kg.5__2585__AT3G61180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	31.3	321	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpC H+fh  C+ kw       + +++CPlC+
   Q: 321  CSICLCAYEDGveLRELPCRHHFHSLCVDKW------LRINATCPLCK 362
           ********9994455699*************......**********7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNQSIPFTVS SSPATDTMDV SPLLGRNRRN RPRSSQPLRG AASRLLRRAS NRRMMLREPS 60
VRVREVAAEQ LEERQSQWAY SKPIIVLDIL WNFVFVIVSI AILGFSSEED PDVPLRLWII 120

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Nucleotide Sequence
(Fasta)

CTCAAAACCT AGAATCATCC ACCCGCAAAG TCGGCAGATT TCCAGCGAAT TCAAACCCGA 60
CCCATCGAGA ATCTGAATCA ACCCGATTAC CCAAGATCCA ATCTTTCTAT TTGATGAATC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005774--C:vacuolar membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_486593

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007470	Arabidopsis thaliana	95.25	1.00e-174	604.00
IUUC-Bol-015878	Brassica oleracea	85.31	4.00e-152	530.00
IUUC-Bra-017312	Brassica rapa	85.56	3.00e-154	536.00
IUUC-Gma-042691	Glycine max	61.82	5.00e-106	377.00
IUUC-Pop-099020	Populus trichocarpa	58.75	4.00e-102	363.00
IUUC-Ppe-101951	Prunus persica	64.31	1.00e-110	392.00
IUUC-Stu-112030	Solanum tuberosum	58.93	3.00e-107	381.00
IUUC-Tca-121200	Theobroma cacao	64.51	2.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence