iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000536

Ensembl Protein ID

EMT24316

UniProt Accession

M8CLL9; M8CLL9_AEGTA

Genbank Protein ID

EMT24316.1

Protein Name

TFIIH basal transcription factor complex p47 subunit

Genbank Nucleotide ID

KD517979

Gene Name

F775_26081

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_26081	EMT24316	EMT24316

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.12	6.00e-52	199.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MYGVGVGGGG GGFNAPSTAS GRRKNQEDDE EEEEEETGDG RVLEAWERAY ADDRSWEALQ 60
EDESGLLRPI DTKNLVHSQY RRRLLLRSAA AAARIQKGLI RYLYIVIDLS KAASEMDYRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACGGCG TCGGCGTCGG CGGCGGCGGA GGCGGGTTCA ACGCGCCGTC CACGGCCTCC 60
GGGCGGCGCA AAAACCAGGA GGACGACGAG GAAGAGGAGG AGGAGGAGAC GGGCGACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR007198--Ssl1-like
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A

PROSITE

PS50234--VWFA

Pfam

PF04056--Ssl1

SMART

SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

ats:F775_26081

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002041	Ailuropoda melanoleuca	36.10	1.00e-51	196.00
IUUC-Atr-003056	Amborella trichopoda	70.13	7.00e-97	346.00
IUUC-Apl-003464	Anas platyrhynchos	36.70	2.00e-43	169.00
IUUC-Aca-004745	Anolis carolinensis	38.02	2.00e-57	215.00
IUUC-Aly-005559	Arabidopsis lyrata	69.25	4.00e-115	407.00
IUUC-Ath-007556	Arabidopsis thaliana	69.25	4.00e-115	407.00
IUUC-Ago-007851	Ashbya gossypii	39.12	8.00e-55	207.00
IUUC-Acl-008100	Aspergillus clavatus	35.71	2.00e-49	189.00
IUUC-Afl-008649	Aspergillus flavus	36.23	3.00e-11	58.90
IUUC-Afu-009066	Aspergillus fumigatus	35.31	2.00e-51	196.00
IUUC-Ani-009372	Aspergillus nidulans	36.36	7.00e-51	194.00
IUUC-Ang-009726	Aspergillus niger	35.37	2.00e-53	202.00
IUUC-Aor-010135	Aspergillus oryzae	36.39	4.00e-51	194.00
IUUC-Ate-010399	Aspergillus terreus	32.26	1.00e-18	85.10
IUUC-Ame-011618	Astyanax mexicanus	38.41	1.00e-56	212.00
IUUC-Bgr-012154	Blumeria graminis	35.88	3.00e-48	185.00
IUUC-Bta-012353	Bos taurus	36.10	2.00e-55	209.00
IUUC-Bci-013932	Botrytis cinerea	38.87	6.00e-51	194.00
IUUC-Bdi-014391	Brachypodium distachyon	94.69	1.00e-153	535.00
IUUC-Bol-015128	Brassica oleracea	73.51	4.00e-117	414.00
IUUC-Bra-017932	Brassica rapa	73.51	4.00e-117	414.00
IUUC-Cel-018649	Caenorhabditis elegans	36.60	1.00e-42	166.00
IUUC-Cja-018776	Callithrix jacchus	35.46	3.00e-51	194.00
IUUC-Cfa-020584	Canis familiaris	35.78	2.00e-51	195.00
IUUC-Cpo-021300	Cavia porcellus	36.10	1.00e-51	196.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	45.36	3.00e-59	221.00
IUUC-Csa-024092	Chlorocebus sabaeus	35.78	3.00e-51	195.00
IUUC-Cho-024919	Choloepus hoffmanni	39.87	3.00e-27	114.00
IUUC-Cin-025386	Ciona intestinalis	36.28	3.00e-55	207.00
IUUC-Csv-026295	Ciona savignyi	36.42	3.00e-51	194.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	36.46	3.00e-45	175.00
IUUC-Cne-026956	Cryptococcus neoformans	35.48	7.00e-48	184.00
IUUC-Cme-027150	Cyanidioschyzon merolae	33.86	2.00e-35	142.00
IUUC-Dre-027962	Danio rerio	38.98	1.00e-57	216.00
IUUC-Dno-029979	Dasypus novemcinctus	36.74	5.00e-47	181.00
IUUC-Dse-031405	Dothistroma septosporum	42.00	6.00e-52	197.00
IUUC-Dme-031710	Drosophila melanogaster	33.78	1.00e-48	186.00
IUUC-Ete-032631	Echinops telfairi	32.91	9.00e-45	173.00
IUUC-Eca-034054	Equus caballus	36.74	3.00e-55	208.00
IUUC-Fca-035724	Felis catus	33.87	1.00e-47	183.00
IUUC-Fal-036987	Ficedula albicollis	36.74	1.00e-54	206.00
IUUC-Fox-037692	Fusarium oxysporum	37.67	2.00e-53	202.00
IUUC-Fso-038442	Fusarium solani	38.03	3.00e-52	198.00
IUUC-Gmo-039273	Gadus morhua	39.56	5.00e-59	221.00
IUUC-Ggr-040009	Gaeumannomyces graminis	38.66	5.00e-47	181.00
IUUC-Gga-041089	Gallus gallus	36.42	6.00e-55	207.00
IUUC-Gac-041978	Gasterosteus aculeatus	42.35	5.00e-55	207.00
IUUC-Gma-043371	Glycine max	76.57	1.00e-133	468.00
IUUC-Hsa-046001	Homo sapiens	35.78	5.00e-51	194.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	36.10	7.00e-52	197.00
IUUC-Kpa-049235	Komagataella pastoris	41.47	1.00e-58	219.00
IUUC-Lch-049926	Latimeria chalumnae	37.14	4.00e-50	191.00
IUUC-Lpe-051352	Leersia perrieri	90.43	8.00e-146	509.00
IUUC-Loc-051987	Lepisosteus oculatus	38.02	2.00e-56	211.00
IUUC-Lma-053171	Leptosphaeria maculans	35.50	2.00e-44	173.00
IUUC-Laf-054372	Loxodonta africana	36.42	2.00e-55	209.00
IUUC-Mcc-055108	Macaca mulatta	35.78	3.00e-51	195.00
IUUC-Mor-056990	Magnaporthe oryzae	39.39	1.00e-50	193.00
IUUC-Mpo-057587	Magnaporthe poae	26.92	2.50e-02	32.00
IUUC-Mtr-058401	Medicago truncatula	70.81	6.00e-130	456.00
IUUC-Mla-059186	Melampsora laricipopulina	42.18	3.00e-63	234.00
IUUC-Mvi-060262	Microbotryum violaceum	35.96	2.00e-55	209.00
IUUC-Mmr-061688	Microcebus murinus	36.62	7.00e-39	153.00
IUUC-Mdo-062154	Monodelphis domestica	35.78	2.00e-51	195.00
IUUC-Mmu-064232	Mus musculus	35.35	3.00e-50	191.00
IUUC-Mac-065091	Musa acuminata	76.00	2.00e-125	441.00
IUUC-Mpu-066747	Mustela putorius furo	33.02	1.00e-38	153.00
IUUC-Mlu-067799	Myotis lucifugus	38.85	4.00e-50	191.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	2.00e-13	67.80
IUUC-Ncr-068704	Neurospora crassa	38.33	3.00e-54	205.00
IUUC-Nle-069054	Nomascus leucogenys	35.78	2.00e-51	195.00
IUUC-Ont-071624	Oreochromis niloticus	44.09	5.00e-58	217.00
IUUC-Oan-072898	Ornithorhynchus anatinus	36.10	4.00e-51	194.00
IUUC-Ocu-074289	Oryctolagus cuniculus	36.45	5.00e-52	197.00
IUUC-Oba-075985	Oryza barthii	83.70	1.00e-145	509.00
IUUC-Obr-076887	Oryza brachyantha	83.80	2.00e-146	511.00
IUUC-Ogl-077823	Oryza glaberrima	83.70	1.00e-145	509.00
IUUC-Ogu-078412	Oryza glumaepatula	83.38	3.00e-148	517.00
IUUC-Oin-079569	Oryza indica	86.83	6.00e-163	566.00
IUUC-Olo-080249	Oryza longistaminata	87.25	4.00e-148	517.00
IUUC-Ome-081240	Oryza meridionalis	83.38	1.00e-148	519.00
IUUC-Oni-082152	Oryza nivara	83.38	2.00e-148	517.00
IUUC-Opu-084011	Oryza punctata	84.49	2.00e-149	521.00
IUUC-Oru-084719	Oryza rufipogon	83.66	1.00e-148	518.00
IUUC-Osa-085286	Oryza sativa	83.10	5.00e-147	513.00
IUUC-Ola-086525	Oryzias latipes	42.08	8.00e-50	190.00
IUUC-Olu-087876	Ostreococcus lucimarinus	43.04	1.00e-62	233.00
IUUC-Oga-088125	Otolemur garnettii	36.10	8.00e-54	203.00
IUUC-Oar-089701	Ovis aries	36.10	3.00e-55	208.00
IUUC-Ptr-091218	Pan troglodytes	35.46	4.00e-51	194.00
IUUC-Pan-091755	Papio anubis	35.78	3.00e-51	195.00
IUUC-Psi-094061	Pelodiscus sinensis	36.10	3.00e-51	195.00
IUUC-Pma-094430	Petromyzon marinus	41.43	5.00e-55	206.00
IUUC-Pno-094900	Phaeosphaeria nodorum	40.68	1.00e-10	61.20
IUUC-Ppa-095895	Physcomitrella patens	58.28	9.00e-107	379.00
IUUC-Pfo-096297	Poecilia formosa	43.82	4.00e-56	210.00
IUUC-Pab-097717	Pongo abelii	35.78	3.00e-51	195.00
IUUC-Pop-098938	Populus trichocarpa	74.00	4.00e-114	403.00
IUUC-Pca-100389	Procavia capensis	34.85	7.00e-44	170.00
IUUC-Ppe-102045	Prunus persica	73.68	5.00e-115	407.00
IUUC-Pva-102357	Pteropus vampyrus	38.58	2.00e-14	72.00
IUUC-Pgr-103399	Puccinia graminis	40.88	4.00e-60	224.00
IUUC-Ptt-103872	Puccinia triticina	41.75	5.00e-60	224.00
IUUC-Pte-104092	Pyrenophora teres	36.92	7.00e-48	184.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	37.31	7.00e-48	184.00
IUUC-Rno-105515	Rattus norvegicus	36.31	2.00e-54	205.00
IUUC-Sce-106434	Saccharomyces cerevisiae	39.12	2.00e-56	212.00
IUUC-Sha-106808	Sarcophilus harrisii	35.46	2.00e-50	191.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	38.91	1.00e-49	189.00
IUUC-Spo-108044	Schizosaccharomyces pombe	39.59	6.00e-58	217.00
IUUC-Smo-109581	Selaginella moellendorffii	55.86	7.00e-94	336.00
IUUC-Sit-110704	Setaria italica	84.87	4.00e-146	510.00
IUUC-Sly-110990	Solanum lycopersicum	68.75	3.00e-90	324.00
IUUC-Stu-112542	Solanum tuberosum	72.40	9.00e-90	322.00
IUUC-Sar-113766	Sorex araneus	35.17	1.00e-44	172.00
IUUC-Sbi-114016	Sorghum bicolor	83.75	2.00e-142	497.00
IUUC-Sre-115099	Sporisorium reilianum	36.86	3.00e-52	199.00
IUUC-Ssc-115277	Sus scrofa	35.78	1.00e-51	196.00
IUUC-Tgu-117343	Taeniopygia guttata	37.38	2.00e-54	206.00
IUUC-Tru-118397	Takifugu rubripes	42.69	6.00e-56	210.00
IUUC-Tni-120272	Tetraodon nigroviridis	41.76	7.00e-54	203.00
IUUC-Tca-121514	Theobroma cacao	75.41	6.00e-131	459.00
IUUC-Tre-121990	Trichoderma reesei	39.20	6.00e-53	201.00
IUUC-Tvi-122504	Trichoderma virens	40.96	7.00e-51	193.00
IUUC-Tae-123153	Triticum aestivum	99.40	2.00e-158	551.00
IUUC-Tur-126693	Triticum urartu	86.32	1.00e-150	524.00
IUUC-Tme-127011	Tuber melanosporum	38.61	1.00e-52	199.00
IUUC-Tbe-127939	Tupaia belangeri	35.78	2.00e-51	195.00
IUUC-Ttr-128889	Tursiops truncatus	36.12	7.00e-50	190.00
IUUC-Uma-129450	Ustilago maydis	35.74	6.00e-52	197.00
IUUC-Vda-129919	Verticillium dahliae	37.50	7.00e-46	177.00
IUUC-Vvi-130928	Vitis vinifera	76.24	1.00e-120	425.00
IUUC-Xtr-131891	Xenopus tropicalis	31.45	1.00e-42	166.00
IUUC-Xma-133260	Xiphophorus maculatus	43.03	3.00e-55	207.00
IUUC-Yli-134578	Yarrowia lipolytica	41.41	8.00e-51	194.00
IUUC-Zma-135427	Zea mays	89.72	2.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence