iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000014994.2	ENSCJAT00000029232.2	ENSCJAP00000027660.2
ENSCJAG00000014994.2	ENSCJAT00000029249.2	ENSCJAP00000027676.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-27	93.7	339	369
UBD/Beta-Prp	1.40e-44	153.4	337	620

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H ++v++++f ++ +ll++G+ D  i++W++
   Q: 339  HLSEVNAVRFgPNsNLLATGGADRLIHLWNV 369
           99*********777****************7 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           ++h s +++v f p+++llatg++d+ i +w+v    l   ++l+g  + +t+v+f+p+g   + +   +++++w +   +   tl+gh
   Q: 337  DAHLSEVNAVRFGPNSNLLATGGADRLIHLWNVVGSRLeaNQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKETLSGH 425
           789999*****************************99988899*****************888888889******************** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           +d+v++ +f  +++  v+Gs+drt++ wdl   +c++ t ++ +    c  v + + +++sG++D+++r+Wd++   + +      +++
   Q: 426  KDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSR-TINVLS---YCNDVVCGDHIIISGHNDQKIRFWDSRGPHCTQVIP--VQGR 508
           ************************************9.666655...4555555556*************************5..589* PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgec.....vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnss 266
           v+sls+++++ +l+s+s+d t+k+ dl+ +++      + +++ +d++k   fsp+  + + gs+Dg ++iWd+++g+l + lq+++  
   Q: 509  VTSLSLSHDQLHLLSCSRDDTLKVIDLRVSNIrqvfrADGFKCGSDWTK-AVFSPDRSYALAGSCDGALYIWDVDTGKLESRLQGPH-- 594
           ****************************888833334444555556666.8899*******************************99.. PP
   S: 267  visvavlsfgdnvlvlgsedskvniw 292
            +   +++++++++v++++  k+ +w
   Q: 595  CVNAVAWCYSGSHVVSVDQGRKIVLW 620
           4444446999********99999999 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

RPPPGVTESP RACWKRHIVR QLRLRDRTQK ELFLELVPAY NHLLEKAELL DKFSKKLQPE 60
PNSVTPATHQ GPWEEPGPDS DQVQSLATLK VKWQEEEEGL RLVCGEMAYQ VVEKSAALGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCCGCCCC CTGGCGTCAC GGAGTCCCCG CGACGTCCCG CCCCGACCCG GCGCCGTGCC 60
GGGCGGGAGG AGCGCGCCGC GAGGCGGGAG AGCGCGGCCA TGGCGGGGCC CGGGGTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0039689--P:negative stranded viral RNA replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	27.94	1.00e-27	117.00
IUUC-Aml-001470	Ailuropoda melanoleuca	67.36	0.00e+00	733.00
IUUC-Atr-003073	Amborella trichopoda	30.51	2.00e-25	110.00
IUUC-Aly-005435	Arabidopsis lyrata	30.79	1.00e-38	154.00
IUUC-Ath-006948	Arabidopsis thaliana	30.79	2.00e-39	156.00
IUUC-Ame-011152	Astyanax mexicanus	42.83	1.00e-117	417.00
IUUC-Bta-013118	Bos taurus	83.55	0.00e+00	912.00
IUUC-Bdi-014231	Brachypodium distachyon	29.47	4.00e-32	132.00
IUUC-Bol-016174	Brassica oleracea	29.14	1.00e-36	147.00
IUUC-Bra-017165	Brassica rapa	28.81	2.00e-35	143.00
IUUC-Cel-018234	Caenorhabditis elegans	32.32	1.00e-44	174.00
IUUC-Cfa-020878	Canis familiaris	82.57	0.00e+00	900.00
IUUC-Cpo-022476	Cavia porcellus	82.55	0.00e+00	879.00
IUUC-Csa-024134	Chlorocebus sabaeus	89.23	0.00e+00	975.00
IUUC-Cho-024853	Choloepus hoffmanni	76.77	6.00e-165	573.00
IUUC-Csv-025836	Ciona savignyi	41.38	2.00e-37	148.00
IUUC-Dre-027949	Danio rerio	42.48	2.00e-126	446.00
IUUC-Dno-029683	Dasypus novemcinctus	84.05	0.00e+00	769.00
IUUC-Dor-030897	Dipodomys ordii	78.50	0.00e+00	918.00
IUUC-Ete-032957	Echinops telfairi	93.23	1.00e-130	459.00
IUUC-Eca-033303	Equus caballus	89.81	3.00e-162	564.00
IUUC-Eeu-035336	Erinaceus europaeus	71.74	1.00e-150	526.00
IUUC-Fca-036232	Felis catus	84.42	0.00e+00	976.00
IUUC-Gmo-038880	Gadus morhua	50.70	3.00e-70	259.00
IUUC-Gac-042500	Gasterosteus aculeatus	40.58	4.00e-93	335.00
IUUC-Gma-043452	Glycine max	30.70	1.00e-40	160.00
IUUC-Ggo-045130	Gorilla gorilla	93.12	0.00e+00	717.00
IUUC-Hsa-046359	Homo sapiens	91.64	0.00e+00	977.00
IUUC-Itr-048780	Ictidomys tridecemlineatus	85.18	0.00e+00	949.00
IUUC-Lch-050669	Latimeria chalumnae	55.12	5.00e-95	340.00
IUUC-Loc-052789	Lepisosteus oculatus	43.18	6.00e-113	401.00
IUUC-Laf-053699	Loxodonta africana	83.60	0.00e+00	902.00
IUUC-Mcc-055657	Macaca mulatta	84.52	0.00e+00	888.00
IUUC-Meu-056639	Macropus eugenii	50.19	1.00e-108	387.00
IUUC-Mtr-058062	Medicago truncatula	29.67	9.00e-34	138.00
IUUC-Mmr-061314	Microcebus murinus	80.19	0.00e+00	849.00
IUUC-Mdo-061841	Monodelphis domestica	65.23	0.00e+00	693.00
IUUC-Mmu-064065	Mus musculus	82.32	0.00e+00	933.00
IUUC-Mac-065022	Musa acuminata	30.91	2.00e-37	149.00
IUUC-Mpu-066742	Mustela putorius furo	82.61	0.00e+00	888.00
IUUC-Mlu-067019	Myotis lucifugus	86.14	0.00e+00	659.00
IUUC-Nle-069037	Nomascus leucogenys	91.97	0.00e+00	1028.00
IUUC-Opr-071039	Ochotona princeps	80.81	0.00e+00	874.00
IUUC-Oan-073431	Ornithorhynchus anatinus	72.22	3.00e-138	484.00
IUUC-Ocu-074772	Oryctolagus cuniculus	84.52	0.00e+00	830.00
IUUC-Obr-076632	Oryza brachyantha	28.62	9.00e-30	124.00
IUUC-Olo-080408	Oryza longistaminata	28.62	9.00e-27	114.00
IUUC-Opu-083918	Oryza punctata	28.19	1.00e-26	115.00
IUUC-Ola-086964	Oryzias latipes	53.31	4.00e-83	300.00
IUUC-Olu-087622	Ostreococcus lucimarinus	30.63	5.00e-33	135.00
IUUC-Oga-088188	Otolemur garnettii	84.35	0.00e+00	875.00
IUUC-Oar-090231	Ovis aries	78.19	0.00e+00	895.00
IUUC-Ptr-091434	Pan troglodytes	88.71	0.00e+00	931.00
IUUC-Pan-091868	Papio anubis	90.32	0.00e+00	982.00
IUUC-Psi-093652	Pelodiscus sinensis	62.88	2.00e-159	555.00
IUUC-Ppa-095699	Physcomitrella patens	25.52	1.00e-34	141.00
IUUC-Pfo-096960	Poecilia formosa	40.92	5.00e-96	345.00
IUUC-Pab-097776	Pongo abelii	90.33	0.00e+00	915.00
IUUC-Pop-099116	Populus trichocarpa	30.92	4.00e-36	145.00
IUUC-Pca-100220	Procavia capensis	64.71	2.00e-175	608.00
IUUC-Ppe-101790	Prunus persica	30.06	6.00e-41	161.00
IUUC-Pva-103135	Pteropus vampyrus	86.01	0.00e+00	858.00
IUUC-Rno-105529	Rattus norvegicus	81.66	0.00e+00	952.00
IUUC-Sha-107062	Sarcophilus harrisii	63.91	0.00e+00	717.00
IUUC-Smo-109404	Selaginella moellendorffii	30.43	2.00e-35	143.00
IUUC-Sit-110828	Setaria italica	31.53	5.00e-34	138.00
IUUC-Sly-111009	Solanum lycopersicum	29.97	5.00e-39	155.00
IUUC-Stu-112370	Solanum tuberosum	29.97	8.00e-39	154.00
IUUC-Sar-113109	Sorex araneus	65.85	8.00e-129	453.00
IUUC-Sbi-114819	Sorghum bicolor	31.99	3.00e-35	142.00
IUUC-Ssc-115271	Sus scrofa	85.21	0.00e+00	908.00
IUUC-Tca-121002	Theobroma cacao	31.51	3.00e-38	153.00
IUUC-Tae-123139	Triticum aestivum	26.67	4.00e-28	119.00
IUUC-Tur-126463	Triticum urartu	26.67	1.00e-27	118.00
IUUC-Ttr-128267	Tursiops truncatus	80.32	0.00e+00	848.00
IUUC-Vvi-130878	Vitis vinifera	29.87	2.00e-33	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence