• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105109
UUCD1 version UUC-RaN-00129
Ensembl Protein ID ENSRNOP00000060441.2
UniProt Accession Q66HG0; RNF13_RAT
Genbank Protein ID AAH81881.1
Protein Name E3 ubiquitin-protein ligase RNF13; RING finger protein 13; RING-type E3 ubiquitin transferase RNF13
Genbank Nucleotide ID BC081881
Gene Name Rnf13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000029209.4 ENSRNOT00000068606.2 ENSRNOP00000060441.2
Annotation
mRNA Expression
ArrayExpress
DNA & RNA Element
TRANSFACRAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 5.80e-09 36.7 240 282
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle+++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLEEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP
   
Organism Rattus norvegicus
Functional Description
(View)

Functional Description


     E3 ubiquitin-protein ligase that may play a role in controlling cell proliferation.
 E3 ubiquitin-protein ligase that may play a role in controlling cell proliferation.
Protein Sequence
(Fasta)
MLLSIGMLML SATQVYTILT VQLFAFLNLL PVEADILAYN FENASQTFED LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPLKDNSS GTFIVLIRRL DCNFDIKVLN AQRAGYKAAI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105109|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCAGTCATG AAGTCCGGGT AGCGACTTCT CTTGGGTGGC CGTGACCCTA GGTTCCGGGG 60
GCCGGACTTC AGGTAAGAGT GTGGCTCCGC AGCGGTAGGC GGGGGTTGTC GGGCCTGGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105109|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0967--Endosome
KW-0325--Glycoprotein
KW-0333--Golgi apparatus
KW-0458--Lysosome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF02225--PA
PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0005829--C:cytosol
GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005637--C:nuclear inner membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
KEGG rno:681578
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000889 Aegilops tauschii 27.31 3.00e-17 83.20
IUUC-Aml-001909 Ailuropoda melanoleuca 93.70 1.00e-178 619.00
IUUC-Atr-003055 Amborella trichopoda 31.10 6.00e-31 128.00
IUUC-Apl-004022 Anas platyrhynchos 88.19 2.00e-166 577.00
IUUC-Aca-004641 Anolis carolinensis 85.68 4.00e-164 570.00
IUUC-Aly-006519 Arabidopsis lyrata 33.46 3.00e-33 135.00
IUUC-Ath-006590 Arabidopsis thaliana 33.07 6.00e-32 131.00
IUUC-Acl-008221 Aspergillus clavatus 54.00 4.00e-13 70.50
IUUC-Afl-008383 Aspergillus flavus 52.00 7.00e-13 69.70
IUUC-Afu-008769 Aspergillus fumigatus 52.00 7.00e-13 69.70
IUUC-Ani-009337 Aspergillus nidulans 35.56 1.00e-13 69.70
IUUC-Ate-010334 Aspergillus terreus 52.00 7.00e-13 69.70
IUUC-Ame-010635 Astyanax mexicanus 70.44 6.00e-135 473.00
IUUC-Bgr-012131 Blumeria graminis 52.00 6.00e-13 69.70
IUUC-Bta-012593 Bos taurus 93.44 0.00e+00 657.00
IUUC-Bci-013936 Botrytis cinerea 36.49 3.00e-13 70.10
IUUC-Bdi-014479 Brachypodium distachyon 33.60 2.00e-28 119.00
IUUC-Bol-015396 Brassica oleracea 34.54 4.00e-23 102.00
IUUC-Bra-016728 Brassica rapa 32.99 9.00e-34 137.00
IUUC-Cel-018181 Caenorhabditis elegans 31.72 1.00e-28 120.00
IUUC-Cja-019353 Callithrix jacchus 92.91 9.00e-176 609.00
IUUC-Cfa-020234 Canis familiaris 93.96 6.00e-179 619.00
IUUC-Cpo-021602 Cavia porcellus 91.25 1.00e-150 525.00
IUUC-Csa-023201 Chlorocebus sabaeus 92.91 3.00e-176 611.00
IUUC-Cho-024954 Choloepus hoffmanni 78.48 1.00e-141 495.00
IUUC-Cin-025554 Ciona intestinalis 42.47 1.00e-61 229.00
IUUC-Csv-025959 Ciona savignyi 43.68 5.00e-52 198.00
IUUC-Dre-028744 Danio rerio 76.62 6.00e-134 470.00
IUUC-Dno-029675 Dasypus novemcinctus 92.91 2.00e-177 614.00
IUUC-Dor-030791 Dipodomys ordii 77.11 7.00e-134 469.00
IUUC-Dse-031406 Dothistroma septosporum 45.00 5.00e-13 70.10
IUUC-Dme-031765 Drosophila melanogaster 40.78 2.00e-51 197.00
IUUC-Ete-032577 Echinops telfairi 83.96 2.00e-136 478.00
IUUC-Eca-034148 Equus caballus 92.39 3.00e-176 610.00
IUUC-Eeu-034552 Erinaceus europaeus 91.86 1.00e-171 595.00
IUUC-Fca-036021 Felis catus 93.70 6.00e-178 616.00
IUUC-Fal-037621 Ficedula albicollis 87.14 2.00e-164 571.00
IUUC-Fox-038011 Fusarium oxysporum 38.96 2.00e-13 70.50
IUUC-Gmo-039485 Gadus morhua 76.01 4.00e-130 457.00
IUUC-Ggr-039824 Gaeumannomyces graminis 52.00 1.00e-12 68.90
IUUC-Gga-041166 Gallus gallus 88.19 3.00e-167 581.00
IUUC-Gac-042124 Gasterosteus aculeatus 74.38 7.00e-126 443.00
IUUC-Ggo-045344 Gorilla gorilla 93.18 7.00e-177 612.00
IUUC-Hsa-045960 Homo sapiens 93.18 7.00e-177 612.00
IUUC-Hvu-047136 Hordeum vulgare 34.39 4.00e-29 122.00
IUUC-Itr-048327 Ictidomys tridecemlineatus 92.13 2.00e-175 608.00
IUUC-Lch-050635 Latimeria chalumnae 80.31 5.00e-132 464.00
IUUC-Lpe-051192 Leersia perrieri 34.39 1.00e-28 121.00
IUUC-Loc-052869 Lepisosteus oculatus 77.61 4.00e-138 484.00
IUUC-Lma-053120 Leptosphaeria maculans 43.75 1.00e-13 72.00
IUUC-Laf-054477 Loxodonta africana 90.29 6.00e-174 603.00
IUUC-Mcc-055232 Macaca mulatta 92.91 3.00e-176 611.00
IUUC-Meu-056237 Macropus eugenii 81.99 2.00e-115 408.00
IUUC-Mor-057005 Magnaporthe oryzae 52.00 1.00e-12 68.90
IUUC-Mpo-057523 Magnaporthe poae 52.00 1.00e-12 68.60
IUUC-Mtr-058129 Medicago truncatula 32.03 1.00e-27 117.00
IUUC-Mla-059171 Melampsora laricipopulina 42.59 2.00e-10 60.80
IUUC-Mga-059780 Meleagris gallopavo 88.19 4.00e-167 580.00
IUUC-Mvi-060468 Microbotryum violaceum 46.00 5.00e-12 66.60
IUUC-Mmr-061384 Microcebus murinus 93.24 2.00e-171 595.00
IUUC-Mdo-062781 Monodelphis domestica 89.01 8.00e-172 596.00
IUUC-Mmu-063727 Mus musculus 98.95 8.00e-180 622.00
IUUC-Mac-065216 Musa acuminata 34.50 1.00e-29 124.00
IUUC-Mpu-066497 Mustela putorius furo 94.23 6.00e-179 619.00
IUUC-Mlu-067654 Myotis lucifugus 94.42 2.00e-114 404.00
IUUC-Ncr-068802 Neurospora crassa 43.59 7.00e-14 72.80
IUUC-Nle-069368 Nomascus leucogenys 93.18 7.00e-177 612.00
IUUC-Opr-070934 Ochotona princeps 64.83 1.00e-103 369.00
IUUC-Ont-071868 Oreochromis niloticus 73.98 3.00e-125 441.00
IUUC-Oan-072733 Ornithorhynchus anatinus 83.63 4.00e-99 353.00
IUUC-Ocu-074083 Oryctolagus cuniculus 92.39 2.00e-176 611.00
IUUC-Oba-075841 Oryza barthii 33.33 8.00e-27 115.00
IUUC-Obr-076703 Oryza brachyantha 35.57 1.00e-29 124.00
IUUC-Ogl-077861 Oryza glaberrima 35.57 8.00e-30 125.00
IUUC-Ogu-078205 Oryza glumaepatula 34.78 6.00e-28 119.00
IUUC-Olo-081024 Oryza longistaminata 35.18 8.00e-29 122.00
IUUC-Ome-081844 Oryza meridionalis 35.57 8.00e-30 124.00
IUUC-Oni-082382 Oryza nivara 32.81 1.00e-29 124.00
IUUC-Oru-085122 Oryza rufipogon 33.33 1.00e-26 114.00
IUUC-Osa-086175 Oryza sativa 35.57 7.00e-30 125.00
IUUC-Ola-086440 Oryzias latipes 72.04 1.00e-112 399.00
IUUC-Oga-088291 Otolemur garnettii 88.68 2.00e-160 558.00
IUUC-Oar-089911 Ovis aries 93.44 0.00e+00 658.00
IUUC-Ptr-091166 Pan troglodytes 93.18 7.00e-177 612.00
IUUC-Pan-092154 Papio anubis 92.91 3.00e-176 611.00
IUUC-Psi-093062 Pelodiscus sinensis 87.14 6.00e-162 563.00
IUUC-Pma-094545 Petromyzon marinus 75.00 4.00e-26 108.00
IUUC-Ppa-095268 Physcomitrella patens 30.22 1.00e-27 117.00
IUUC-Pfo-097232 Poecilia formosa 74.92 6.00e-129 453.00
IUUC-Pab-097909 Pongo abelii 92.91 3.00e-177 614.00
IUUC-Pop-099688 Populus trichocarpa 32.08 3.00e-23 102.00
IUUC-Pca-100724 Procavia capensis 75.54 4.00e-133 467.00
IUUC-Ppe-101202 Prunus persica 51.72 3.00e-15 77.00
IUUC-Pva-102624 Pteropus vampyrus 87.93 7.00e-158 549.00
IUUC-Ptt-103943 Puccinia triticina 44.44 8.00e-11 62.00
IUUC-Pte-104044 Pyrenophora teres 49.09 9.00e-14 71.60
IUUC-Pyt-104819 Pyrenophora triticirepentis 50.00 2.00e-13 70.90
IUUC-Sha-107563 Sarcophilus harrisii 87.17 1.00e-167 582.00
IUUC-Sja-107946 Schizosaccharomyces japonicus 48.94 3.00e-12 65.50
IUUC-Spo-108205 Schizosaccharomyces pombe 45.45 2.00e-10 60.10
IUUC-Ssl-108601 Sclerotinia sclerotiorum 42.86 4.00e-13 69.30
IUUC-Smo-109031 Selaginella moellendorffii 31.79 4.00e-39 154.00
IUUC-Sit-110628 Setaria italica 32.98 4.00e-30 126.00
IUUC-Sly-110842 Solanum lycopersicum 29.77 2.00e-28 120.00
IUUC-Stu-112408 Solanum tuberosum 30.65 8.00e-28 118.00
IUUC-Sre-114989 Sporisorium reilianum 45.10 4.00e-13 70.50
IUUC-Ssc-116043 Sus scrofa 93.44 3.00e-177 614.00
IUUC-Tgu-116908 Taeniopygia guttata 86.13 2.00e-163 568.00
IUUC-Tru-118219 Takifugu rubripes 74.53 4.00e-129 454.00
IUUC-Tsy-119333 Tarsius syrichta 93.44 5.00e-176 610.00
IUUC-Tni-120332 Tetraodon nigroviridis 68.75 2.00e-84 305.00
IUUC-Tca-121333 Theobroma cacao 33.46 6.00e-28 117.00
IUUC-Tre-122208 Trichoderma reesei 52.00 1.00e-12 68.20
IUUC-Tae-125320 Triticum aestivum 31.88 2.00e-30 125.00
IUUC-Tur-126455 Triticum urartu 32.25 4.00e-26 112.00
IUUC-Tme-126894 Tuber melanosporum 39.47 1.00e-12 68.20
IUUC-Tbe-127859 Tupaia belangeri 82.89 1.00e-159 555.00
IUUC-Ttr-129219 Tursiops truncatus 83.46 6.00e-149 520.00
IUUC-Uma-129559 Ustilago maydis 52.08 1.00e-12 68.20
IUUC-Vda-129915 Verticillium dahliae 52.00 5.00e-13 69.70
IUUC-Vpa-130314 Vicugna pacos 90.55 3.00e-166 577.00
IUUC-Xtr-132114 Xenopus tropicalis 74.72 1.00e-128 452.00
IUUC-Xma-133474 Xiphophorus maculatus 74.92 4.00e-129 454.00
IUUC-Yli-134442 Yarrowia lipolytica 46.81 1.00e-12 67.40
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved