iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021850

Ensembl Protein ID

ENSCPOP00000007496.2

UniProt Accession

H0VC46; H0VC46_CAVPO

Genbank Protein ID

ENSCPOP00000007496

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02038623

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000008339.3	ENSCPOT00000008414.2	ENSCPOP00000007496.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.60e-21	75.0	179	218
ULD/UDP/UBQ/UBQ_PIM	5.50e-26	90.3	20	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG+dre+++ aLra++nn+ +AveyLl+g
   Q: 179  EYETMLTEIMSMGYDRERVVAALRASYNNPHRAVEYLLTG 218
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k k
   Q: 20   VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVSGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKGK 97
           68************************************************************************9976 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

VACCRKIKGP PRCSGPAMAV TITLKTLQQQ TFKIRMEPDE TVKVLKEKIE AEKGRDAFPV 60
SGQKLIYAGK ILSDDVPIRD YRIDEKNFVV VMVTKGKAGQ GTLAPPEISP TAAPEPSAPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCATGTT GTCGGAAGAT CAAGGGGCCG CCGCGTTGCT CGGGCCCCGC CATGGCTGTC 60
ACCATCACGC TCAAAACGCT GCAGCAGCAG ACCTTCAAGA TCCGCATGGA GCCTGATGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.93	5.00e-33	135.00
IUUC-Aml-001515	Ailuropoda melanoleuca	85.26	3.00e-144	504.00
IUUC-Aca-004704	Anolis carolinensis	79.23	8.00e-112	396.00
IUUC-Aly-006159	Arabidopsis lyrata	33.59	4.00e-49	188.00
IUUC-Ago-007830	Ashbya gossypii	30.58	2.00e-16	79.70
IUUC-Acl-008212	Aspergillus clavatus	35.77	4.00e-24	105.00
IUUC-Ani-009460	Aspergillus nidulans	38.46	1.00e-28	120.00
IUUC-Ate-010458	Aspergillus terreus	38.65	7.00e-27	114.00
IUUC-Bgr-012056	Blumeria graminis	32.70	3.00e-21	95.90
IUUC-Bta-012377	Bos taurus	90.88	4.00e-145	507.00
IUUC-Bdi-014253	Brachypodium distachyon	40.57	2.00e-33	136.00
IUUC-Bra-016970	Brassica rapa	34.72	8.00e-50	190.00
IUUC-Cel-018364	Caenorhabditis elegans	31.06	2.00e-26	113.00
IUUC-Cja-018946	Callithrix jacchus	91.32	1.00e-145	509.00
IUUC-Cfa-020577	Canis familiaris	91.71	3.00e-151	527.00
IUUC-Csa-023183	Chlorocebus sabaeus	93.11	1.00e-150	525.00
IUUC-Dno-030017	Dasypus novemcinctus	87.82	1.00e-127	449.00
IUUC-Dor-030358	Dipodomys ordii	80.49	2.00e-119	422.00
IUUC-Eca-033599	Equus caballus	88.20	2.00e-131	461.00
IUUC-Fca-036051	Felis catus	91.44	1.00e-150	525.00
IUUC-Fso-038107	Fusarium solani	37.81	2.00e-23	102.00
IUUC-Gmo-038528	Gadus morhua	58.36	5.00e-89	320.00
IUUC-Gga-040133	Gallus gallus	85.51	2.00e-73	269.00
IUUC-Gac-042298	Gasterosteus aculeatus	58.64	4.00e-84	304.00
IUUC-Ggo-045084	Gorilla gorilla	92.37	5.00e-158	550.00
IUUC-Hsa-046614	Homo sapiens	93.11	5.00e-150	523.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	92.37	2.00e-174	605.00
IUUC-Lch-050563	Latimeria chalumnae	62.56	4.00e-104	370.00
IUUC-Laf-054589	Loxodonta africana	91.74	1.00e-141	496.00
IUUC-Mcc-055860	Macaca mulatta	93.11	1.00e-150	525.00
IUUC-Meu-056459	Macropus eugenii	92.56	7.00e-102	363.00
IUUC-Mtr-058239	Medicago truncatula	34.01	8.00e-48	184.00
IUUC-Mmr-060819	Microcebus murinus	93.09	9.00e-160	556.00
IUUC-Mdo-062742	Monodelphis domestica	80.21	1.00e-142	499.00
IUUC-Mmu-063929	Mus musculus	91.46	7.00e-158	549.00
IUUC-Mac-065180	Musa acuminata	34.09	6.00e-44	171.00
IUUC-Mpu-066684	Mustela putorius furo	91.46	6.00e-151	526.00
IUUC-Mlu-067787	Myotis lucifugus	90.63	5.00e-146	510.00
IUUC-Nle-069846	Nomascus leucogenys	82.24	2.00e-130	458.00
IUUC-Ont-072484	Oreochromis niloticus	52.05	1.00e-91	330.00
IUUC-Oan-073572	Ornithorhynchus anatinus	79.01	1.00e-129	456.00
IUUC-Ocu-074968	Oryctolagus cuniculus	91.60	2.00e-103	369.00
IUUC-Ogu-078883	Oryza glumaepatula	39.52	1.00e-31	130.00
IUUC-Ome-081866	Oryza meridionalis	39.52	1.00e-31	130.00
IUUC-Oru-084816	Oryza rufipogon	39.52	2.00e-31	129.00
IUUC-Oga-089075	Otolemur garnettii	91.03	1.00e-150	525.00
IUUC-Oar-090387	Ovis aries	88.68	6.00e-145	506.00
IUUC-Ptr-090912	Pan troglodytes	89.53	4.00e-139	487.00
IUUC-Pan-092140	Papio anubis	92.37	6.00e-159	553.00
IUUC-Psi-093347	Pelodiscus sinensis	85.34	1.00e-61	229.00
IUUC-Pfo-096607	Poecilia formosa	62.08	1.00e-94	339.00
IUUC-Pab-097738	Pongo abelii	89.53	1.00e-139	489.00
IUUC-Pop-099642	Populus trichocarpa	35.96	5.00e-50	191.00
IUUC-Pca-100348	Procavia capensis	89.84	6.00e-142	496.00
IUUC-Pva-102412	Pteropus vampyrus	91.18	6.00e-149	520.00
IUUC-Pgr-103618	Puccinia graminis	36.54	2.00e-24	106.00
IUUC-Rno-105569	Rattus norvegicus	91.99	3.00e-149	521.00
IUUC-Sha-106918	Sarcophilus harrisii	80.11	5.00e-128	450.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	34.27	2.00e-42	166.00
IUUC-Smo-109518	Selaginella moellendorffii	38.80	1.00e-33	137.00
IUUC-Sly-111480	Solanum lycopersicum	36.92	5.00e-53	201.00
IUUC-Sbi-114459	Sorghum bicolor	32.29	6.00e-45	174.00
IUUC-Ssc-115460	Sus scrofa	90.26	1.00e-155	542.00
IUUC-Tsy-119385	Tarsius syrichta	75.37	8.00e-67	246.00
IUUC-Tni-120493	Tetraodon nigroviridis	70.23	3.00e-71	261.00
IUUC-Tca-121594	Theobroma cacao	36.29	5.00e-51	194.00
IUUC-Tre-121911	Trichoderma reesei	39.60	6.00e-23	101.00
IUUC-Tae-125354	Triticum aestivum	38.52	2.00e-33	135.00
IUUC-Tur-126610	Triticum urartu	38.93	2.00e-33	137.00
IUUC-Tbe-127603	Tupaia belangeri	83.21	3.00e-54	205.00
IUUC-Ttr-129232	Tursiops truncatus	83.47	4.00e-140	490.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence