iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021558

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02012523

Gene Name

RBCK1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000005720.3	ENSCPOT00000005782.2	ENSCPOP00000005158.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.20e-07	29.2	59	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlk..vnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglk 62
           v+v+++   + t++  v p++tVa LK++++   g+pp  q++++ G+ L +d  tL ++g++
   Q: 59   VRVEDAHVQTVTIWlmVRPDMTVASLKDMVFLDYGFPPSLQQWVI-GQRLaRDQETLHSHGVR 120
           56666666677888889****************************.55555*********996 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MDEKTKKAEE MALSLARAVT GGDEQAAVKC ATWLAQQQVS LSVHLKPEVP PTRDIRLCVR 60
VEDAHVQTVT IWLMVRPDMT VASLKDMVFL DYGFPPSLQQ WVIGQRLARD QETLHSHGVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAGA AGACCAAGAA AGGTGGGCGC TGACTGGAGG GGGCGGCCTT CGGGCGGGGA 60
TGACACTGCA CGACCCCGCC TTGCCGGGTT TCCCGCCGCC CAGTTTCCTC CCTTGGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR027370--Znf-RING_LisH
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50053--UBIQUITIN_2
PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00547--ZnF_RBZ

Gene Ontology

GO:0071797--C:LUBAC complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0060546--P:negative regulation of necroptotic process
GO:0032088--P:negative regulation of NF-kappaB transcription factor activity
GO:2001238--P:positive regulation of extrinsic apoptotic signaling pathway
GO:0042346--P:positive regulation of NF-kappaB import into nucleus
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0097039--P:protein linear polyubiquitination
GO:0050852--P:T cell receptor signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001540	Ailuropoda melanoleuca	87.84	0.00e+00	818.00
IUUC-Apl-003627	Anas platyrhynchos	56.76	1.00e-15	73.90
IUUC-Aca-004507	Anolis carolinensis	63.66	3.00e-153	535.00
IUUC-Ame-011008	Astyanax mexicanus	51.97	7.00e-140	490.00
IUUC-Bta-013247	Bos taurus	88.63	0.00e+00	848.00
IUUC-Bci-013637	Botrytis cinerea	24.38	2.00e-12	67.80
IUUC-Cja-018880	Callithrix jacchus	89.61	0.00e+00	858.00
IUUC-Cfa-020477	Canis familiaris	88.63	0.00e+00	847.00
IUUC-Csa-024129	Chlorocebus sabaeus	90.20	0.00e+00	829.00
IUUC-Cin-025630	Ciona intestinalis	39.57	3.00e-82	298.00
IUUC-Csv-026069	Ciona savignyi	52.40	2.00e-74	271.00
IUUC-Dre-027591	Danio rerio	51.85	7.00e-139	487.00
IUUC-Dno-029015	Dasypus novemcinctus	87.25	0.00e+00	820.00
IUUC-Dor-030313	Dipodomys ordii	81.08	0.00e+00	727.00
IUUC-Ete-032908	Echinops telfairi	77.20	0.00e+00	714.00
IUUC-Eca-034295	Equus caballus	73.36	0.00e+00	681.00
IUUC-Eeu-034454	Erinaceus europaeus	81.69	2.00e-108	385.00
IUUC-Fca-036380	Felis catus	89.80	0.00e+00	855.00
IUUC-Fal-037440	Ficedula albicollis	56.90	3.00e-15	72.80
IUUC-Gmo-038561	Gadus morhua	52.73	1.00e-115	409.00
IUUC-Gga-040198	Gallus gallus	40.29	7.00e-30	124.00
IUUC-Gac-041319	Gasterosteus aculeatus	51.86	1.00e-134	473.00
IUUC-Ggo-044456	Gorilla gorilla	62.81	6.00e-146	510.00
IUUC-Hsa-045738	Homo sapiens	90.39	0.00e+00	822.00
IUUC-Itr-049042	Ictidomys tridecemlineatus	90.78	0.00e+00	844.00
IUUC-Lch-050269	Latimeria chalumnae	45.68	2.00e-114	406.00
IUUC-Loc-052776	Lepisosteus oculatus	51.12	4.00e-135	475.00
IUUC-Laf-054269	Loxodonta africana	86.27	0.00e+00	827.00
IUUC-Mcc-055669	Macaca mulatta	90.00	0.00e+00	828.00
IUUC-Mga-059615	Meleagris gallopavo	56.25	9.00e-18	80.90
IUUC-Mmr-061562	Microcebus murinus	91.37	0.00e+00	756.00
IUUC-Mdo-062263	Monodelphis domestica	76.36	0.00e+00	732.00
IUUC-Mmu-064325	Mus musculus	89.02	0.00e+00	824.00
IUUC-Mpu-066385	Mustela putorius furo	89.22	0.00e+00	854.00
IUUC-Mlu-067000	Myotis lucifugus	87.25	0.00e+00	817.00
IUUC-Nle-069812	Nomascus leucogenys	89.80	0.00e+00	822.00
IUUC-Opr-070575	Ochotona princeps	93.63	7.00e-106	377.00
IUUC-Ont-072405	Oreochromis niloticus	51.50	7.00e-137	480.00
IUUC-Ocu-074358	Oryctolagus cuniculus	79.85	0.00e+00	742.00
IUUC-Ola-086403	Oryzias latipes	53.85	1.00e-138	486.00
IUUC-Oga-087986	Otolemur garnettii	87.84	0.00e+00	804.00
IUUC-Oar-089600	Ovis aries	86.67	0.00e+00	847.00
IUUC-Ptr-091224	Pan troglodytes	90.20	0.00e+00	820.00
IUUC-Pan-092739	Papio anubis	90.20	0.00e+00	830.00
IUUC-Pma-094407	Petromyzon marinus	46.23	1.00e-121	429.00
IUUC-Pfo-097161	Poecilia formosa	52.09	1.00e-133	469.00
IUUC-Pab-098627	Pongo abelii	90.20	0.00e+00	815.00
IUUC-Pca-100641	Procavia capensis	86.79	0.00e+00	775.00
IUUC-Pva-102670	Pteropus vampyrus	88.24	0.00e+00	834.00
IUUC-Pte-104234	Pyrenophora teres	25.97	6.00e-12	65.50
IUUC-Rno-105504	Rattus norvegicus	89.22	0.00e+00	826.00
IUUC-Sha-107342	Sarcophilus harrisii	76.11	0.00e+00	746.00
IUUC-Sar-113425	Sorex araneus	86.30	3.00e-110	392.00
IUUC-Ssc-115904	Sus scrofa	90.75	2.00e-87	314.00
IUUC-Tru-118096	Takifugu rubripes	50.67	7.00e-136	477.00
IUUC-Tni-119873	Tetraodon nigroviridis	49.61	1.00e-135	476.00
IUUC-Tbe-127578	Tupaia belangeri	89.60	0.00e+00	681.00
IUUC-Ttr-129107	Tursiops truncatus	88.63	0.00e+00	807.00
IUUC-Vpa-130353	Vicugna pacos	90.69	2.00e-115	409.00
IUUC-Xtr-132168	Xenopus tropicalis	43.14	9.00e-94	337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence