iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106713

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01075590

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000013089.1	ENSSHAT00000015484.1	ENSSHAP00000015357.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.30e-83	279.8	112	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           Gl+NlgNtC++N++LQcL+ +p+l++++l+++++k+ +e    +  ++++++q  +++ +++  ++++p  +++ l+++a++f+  +q+
   Q: 112  GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHE----QGFCMMCTMQAHITQALNNPGNVIKPMPVINDLRRIAKHFRFGNQE 196
           9*****************************777777754....689******************************************* PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           Da+Efl++ +d++++++          +++        + + + +++ ++l+ ++F+g l+s++kc +c+ vs +++p ld++l+++  
   Q: 197  DAHEFLRYTVDAMQKAC----------LNG--------STKLDRHSQATTLVCQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAA 267
           *****************..........333........3355678999***************************************** PP
   S: 180  eetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctsp 268
           +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++ ++vL+l LkRf    ++ s  ki k v++p+ Ld++p++++p
   Q: 268  Q-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFSGGKIAKDVKYPEYLDIRPYMSQP 347
           *.....9***************************************************....668899********************9 PP
   S: 269  eekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           + +   + +Y L+av+vH+G s++ GHY++y+k ++g+W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 348  NGE---PIIYVLYAVLVHTGfSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLN---QQAYVLFYIR 411
           977...8**************************************************...********87 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MTIVDKVSES SNPSACQNQP GSSVAPSLGD MDSGSASWGA VSSLTDIPKH KISLGPVPGA 60
AIYSNSSISD KPKPSAQKDQ STGDGIAPPQ KVLFPAEKIC LKWQQSHRVG AGLQNLGNTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTGAACAA TGACTATAGT TGACAAAGTA TCTGAATCTT CCAACCCATC AGCTTGTCAG 60
AATCAACCTG GCAGCTCTGT GGCACCTTCA CTCGGAGACA TGGACTCAGG CTCTGCAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	38.60	1.00e-70	261.00
IUUC-Aml-002303	Ailuropoda melanoleuca	63.03	0.00e+00	1231.00
IUUC-Atr-003102	Amborella trichopoda	47.56	2.00e-85	310.00
IUUC-Apl-003459	Anas platyrhynchos	50.82	0.00e+00	941.00
IUUC-Aca-004440	Anolis carolinensis	61.09	0.00e+00	1202.00
IUUC-Ago-007836	Ashbya gossypii	27.13	2.00e-34	140.00
IUUC-Ame-011358	Astyanax mexicanus	69.81	0.00e+00	692.00
IUUC-Bta-012803	Bos taurus	61.61	0.00e+00	1421.00
IUUC-Bra-018046	Brassica rapa	43.97	6.00e-83	302.00
IUUC-Cja-019199	Callithrix jacchus	61.21	0.00e+00	1321.00
IUUC-Cfa-020597	Canis familiaris	66.39	0.00e+00	1471.00
IUUC-Cpo-021945	Cavia porcellus	60.06	0.00e+00	1378.00
IUUC-Csa-023485	Chlorocebus sabaeus	61.99	0.00e+00	1306.00
IUUC-Cho-024575	Choloepus hoffmanni	57.49	0.00e+00	1075.00
IUUC-Cne-027049	Cryptococcus neoformans	32.13	2.00e-39	157.00
IUUC-Dre-028442	Danio rerio	54.70	0.00e+00	682.00
IUUC-Dno-029673	Dasypus novemcinctus	67.81	0.00e+00	1597.00
IUUC-Dor-030518	Dipodomys ordii	57.86	2.00e-114	407.00
IUUC-Ete-033088	Echinops telfairi	54.31	0.00e+00	900.00
IUUC-Eca-033579	Equus caballus	64.68	0.00e+00	1446.00
IUUC-Eeu-034511	Erinaceus europaeus	44.71	0.00e+00	722.00
IUUC-Fca-035792	Felis catus	61.99	0.00e+00	1330.00
IUUC-Fal-037075	Ficedula albicollis	50.55	0.00e+00	1018.00
IUUC-Gga-040504	Gallus gallus	50.56	0.00e+00	983.00
IUUC-Gma-044075	Glycine max	48.53	3.00e-86	313.00
IUUC-Ggo-044798	Gorilla gorilla	58.15	0.00e+00	1117.00
IUUC-Hsa-046072	Homo sapiens	61.57	0.00e+00	1292.00
IUUC-Hvu-047620	Hordeum vulgare	41.12	9.00e-73	268.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	67.14	0.00e+00	1621.00
IUUC-Lch-049867	Latimeria chalumnae	53.08	0.00e+00	1053.00
IUUC-Loc-052621	Lepisosteus oculatus	67.19	0.00e+00	735.00
IUUC-Laf-054330	Loxodonta africana	81.84	0.00e+00	1150.00
IUUC-Mcc-054900	Macaca mulatta	86.29	0.00e+00	717.00
IUUC-Meu-056877	Macropus eugenii	82.50	0.00e+00	1298.00
IUUC-Mla-059049	Melampsora laricipopulina	41.93	1.00e-61	231.00
IUUC-Mga-059501	Meleagris gallopavo	47.66	0.00e+00	912.00
IUUC-Mvi-060547	Microbotryum violaceum	44.15	2.00e-80	293.00
IUUC-Mmr-060864	Microcebus murinus	65.95	0.00e+00	1531.00
IUUC-Mdo-062395	Monodelphis domestica	94.04	0.00e+00	2417.00
IUUC-Mmu-064236	Mus musculus	57.56	0.00e+00	1297.00
IUUC-Mpu-065822	Mustela putorius furo	65.22	0.00e+00	1466.00
IUUC-Mlu-067091	Myotis lucifugus	63.68	0.00e+00	1358.00
IUUC-Nle-069004	Nomascus leucogenys	60.73	0.00e+00	1298.00
IUUC-Opr-071170	Ochotona princeps	50.04	0.00e+00	895.00
IUUC-Ont-071832	Oreochromis niloticus	62.25	0.00e+00	673.00
IUUC-Oan-073711	Ornithorhynchus anatinus	72.42	0.00e+00	1670.00
IUUC-Ocu-074596	Oryctolagus cuniculus	84.30	0.00e+00	949.00
IUUC-Oga-088641	Otolemur garnettii	65.52	0.00e+00	1521.00
IUUC-Oar-089760	Ovis aries	59.48	0.00e+00	1319.00
IUUC-Ptr-091445	Pan troglodytes	61.34	0.00e+00	1298.00
IUUC-Pan-092484	Papio anubis	61.94	0.00e+00	1280.00
IUUC-Psi-093277	Pelodiscus sinensis	65.23	0.00e+00	1391.00
IUUC-Pma-094651	Petromyzon marinus	39.62	1.00e-56	213.00
IUUC-Pfo-096469	Poecilia formosa	68.34	0.00e+00	672.00
IUUC-Pab-097794	Pongo abelii	60.22	0.00e+00	1191.00
IUUC-Ppe-101678	Prunus persica	46.58	2.00e-82	300.00
IUUC-Pva-103238	Pteropus vampyrus	59.02	0.00e+00	1260.00
IUUC-Rno-105068	Rattus norvegicus	58.43	0.00e+00	1354.00
IUUC-Smo-108763	Selaginella moellendorffii	49.03	1.00e-83	302.00
IUUC-Sly-111722	Solanum lycopersicum	45.60	4.00e-80	293.00
IUUC-Sar-113340	Sorex araneus	72.95	0.00e+00	989.00
IUUC-Tgu-117149	Taeniopygia guttata	50.64	0.00e+00	1006.00
IUUC-Tru-117776	Takifugu rubripes	65.55	0.00e+00	637.00
IUUC-Tsy-118974	Tarsius syrichta	62.97	0.00e+00	1461.00
IUUC-Tni-120774	Tetraodon nigroviridis	69.04	1.00e-178	619.00
IUUC-Tca-120936	Theobroma cacao	46.91	7.00e-86	311.00
IUUC-Tbe-128006	Tupaia belangeri	72.45	2.00e-106	380.00
IUUC-Ttr-128764	Tursiops truncatus	55.65	0.00e+00	1188.00
IUUC-Vvi-131535	Vitis vinifera	47.60	6.00e-88	318.00
IUUC-Xtr-132544	Xenopus tropicalis	60.35	0.00e+00	686.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence