iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-09	38.5	338	377
ULD/UDP/UBQ/UBQ_Other	4.20e-11	43.0	39	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGF.dreealqaLraannnleaAveyLld 40
           +++++l+ql++MG+ d+e+ l+aL+a++++++aA+e+++ 
   Q: 338  QWQPQLQQLRDMGIqDDELSLRALQATGGDIQAALELIFA 377
           789**********************************996 PP

ULD/UDP/UBQ/UBQ_Other

   S: 22   tVaeLKeki..ekk.lgip.peqqrLiykGkiLeddktLadyglkdgstihllekks 74
           +++ LK+ i  + + +++p pe + Liy G+ L+dd+tL  yg+++gst+h+l+k +
   Q: 39   SISFLKQLIagK-LqESVPdPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSW 94
           7999*****744.35**************************************9876 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSLSDWHLAV KLADQPLAPK SILQLPETEL GEYSLGGYSI SFLKQLIAGK LQESVPDPEL 60
IDLIYCGRKL KDDQTLDFYG IQPGSTVHVL RKSWPEPDQK PEPVDKVAAL REFRVLHTAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGGGTCCG GAGTAGCTAA CTGGTCCCAC GAGAGAGGTG GGGTTGTCAA CACTGTCCCT 60
ACTCACGACT AGGTATCTGT GACCTTGGGC CAAGTGACTT CAGCTTTCTG AGTCTTGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00165--UBA
SM00213--UBQ

KEGG

rno:300744

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001492	Ailuropoda melanoleuca	97.11	4.00e-172	597.00
IUUC-Apl-003718	Anas platyrhynchos	91.90	1.00e-119	422.00
IUUC-Aca-004374	Anolis carolinensis	87.34	6.00e-115	406.00
IUUC-Ame-011071	Astyanax mexicanus	70.05	1.00e-118	419.00
IUUC-Bta-013017	Bos taurus	97.38	1.00e-161	562.00
IUUC-Cja-019192	Callithrix jacchus	97.38	7.00e-167	579.00
IUUC-Cfa-021029	Canis familiaris	96.85	1.00e-171	595.00
IUUC-Cpo-022034	Cavia porcellus	97.38	1.00e-172	598.00
IUUC-Csa-024041	Chlorocebus sabaeus	97.38	6.00e-167	580.00
IUUC-Cho-025044	Choloepus hoffmanni	97.40	9.00e-130	456.00
IUUC-Dre-027989	Danio rerio	71.35	1.00e-127	449.00
IUUC-Dno-029198	Dasypus novemcinctus	97.11	2.00e-160	558.00
IUUC-Dor-030797	Dipodomys ordii	98.44	3.00e-41	161.00
IUUC-Ete-032253	Echinops telfairi	80.31	5.00e-126	444.00
IUUC-Eca-033922	Equus caballus	97.64	5.00e-166	577.00
IUUC-Fca-036535	Felis catus	96.85	1.00e-166	579.00
IUUC-Fal-037066	Ficedula albicollis	89.76	4.00e-149	520.00
IUUC-Gmo-039351	Gadus morhua	56.88	1.00e-90	326.00
IUUC-Gga-040644	Gallus gallus	90.55	6.00e-150	523.00
IUUC-Gac-041890	Gasterosteus aculeatus	59.24	3.00e-99	355.00
IUUC-Ggo-044897	Gorilla gorilla	97.38	6.00e-167	580.00
IUUC-Hsa-046845	Homo sapiens	97.11	1.00e-166	578.00
IUUC-Itr-047964	Ictidomys tridecemlineatus	98.43	2.00e-168	585.00
IUUC-Lch-050308	Latimeria chalumnae	79.32	7.00e-109	386.00
IUUC-Loc-051828	Lepisosteus oculatus	71.95	8.00e-127	446.00
IUUC-Laf-054592	Loxodonta africana	97.38	8.00e-167	579.00
IUUC-Mcc-054839	Macaca mulatta	84.38	9.00e-29	118.00
IUUC-Meu-056303	Macropus eugenii	74.92	4.00e-130	457.00
IUUC-Mga-059969	Meleagris gallopavo	88.77	3.00e-144	504.00
IUUC-Mmr-061014	Microcebus murinus	96.68	1.00e-153	535.00
IUUC-Mdo-062813	Monodelphis domestica	89.82	4.00e-152	530.00
IUUC-Mmu-064028	Mus musculus	98.95	2.00e-169	587.00
IUUC-Mpu-066248	Mustela putorius furo	97.38	4.00e-172	597.00
IUUC-Mlu-067662	Myotis lucifugus	96.85	3.00e-171	594.00
IUUC-Nle-069915	Nomascus leucogenys	97.38	6.00e-167	580.00
IUUC-Opr-070816	Ochotona princeps	82.46	7.00e-124	436.00
IUUC-Ont-071415	Oreochromis niloticus	60.10	7.00e-101	360.00
IUUC-Oan-073720	Ornithorhynchus anatinus	91.60	2.00e-161	561.00
IUUC-Ocu-074581	Oryctolagus cuniculus	93.70	1.00e-165	576.00
IUUC-Ola-086545	Oryzias latipes	66.15	4.00e-108	384.00
IUUC-Oga-089019	Otolemur garnettii	97.38	6.00e-173	599.00
IUUC-Oar-089672	Ovis aries	95.01	9.00e-168	582.00
IUUC-Ptr-091159	Pan troglodytes	97.38	6.00e-167	580.00
IUUC-Pan-092237	Papio anubis	95.67	2.00e-61	228.00
IUUC-Psi-092958	Pelodiscus sinensis	90.55	2.00e-148	518.00
IUUC-Pma-094363	Petromyzon marinus	60.49	2.00e-90	325.00
IUUC-Pfo-097475	Poecilia formosa	60.86	3.00e-109	388.00
IUUC-Pab-097874	Pongo abelii	97.38	6.00e-167	580.00
IUUC-Pca-100267	Procavia capensis	94.70	2.00e-123	435.00
IUUC-Pva-102827	Pteropus vampyrus	97.38	3.00e-166	577.00
IUUC-Sha-106506	Sarcophilus harrisii	92.95	2.00e-163	568.00
IUUC-Sar-113528	Sorex araneus	74.54	1.00e-125	442.00
IUUC-Ssc-116098	Sus scrofa	96.59	5.00e-171	593.00
IUUC-Tgu-117032	Taeniopygia guttata	89.68	6.00e-78	282.00
IUUC-Tru-118100	Takifugu rubripes	62.66	5.00e-99	354.00
IUUC-Tsy-119221	Tarsius syrichta	95.21	2.00e-65	241.00
IUUC-Tni-120222	Tetraodon nigroviridis	60.26	2.00e-99	355.00
IUUC-Tbe-128128	Tupaia belangeri	97.03	6.00e-55	206.00
IUUC-Ttr-128490	Tursiops truncatus	97.38	2.00e-171	594.00
IUUC-Vpa-130576	Vicugna pacos	90.81	3.00e-139	487.00
IUUC-Xtr-132781	Xenopus tropicalis	73.88	2.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence