iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
Mentha
Post-translational Modifications (PTMs)
dbPPT	UniProt
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	61.18	2.00e-22	105.00	IUUC-Hsa-046668
E3 activity/Other	61.18	2.00e-22	105.00	IUUC-Mmu-064142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Functional Description
(View)

Plays a role in root, shoot and flower development. Probably required for normal root and shoot meristem organization and maintenance and the proper expression of PIN and PLT genes (PubMed:19000164). Involved in leaf vasculature patterning (PubMed:18643975).

Protein Sequence
(Fasta)

MEVEKSKSRH EIREERADYE GSPVREHRDG RRKEKDHRSK DKEKDYDREK IRDKDHRRDK 60
EKERDRKRSR DEDTEKEISR GRDKEREKDK SRDRVKEKDK EKERNRHKDR ENERDNEKEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAAAATCGT TCTCCTCTCT TCGCCACCAG AGAGTCTCTC CGTCTCTTTC CACGGCGAGT 60
TTGCGATCGT CCGCGGTTTG CTGTTTGTCG TCATCTCTCT CGTTTGAAGC ATTCTTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome

Interpro

IPR005011--SNU66/SART1

Pfam

PF03343--SART-1

Gene Ontology

GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0010588--P:cotyledon vascular tissue pattern formation
GO:0009908--P:flower development
GO:0048366--P:leaf development
GO:0010305--P:leaf vascular tissue pattern formation
GO:0000481--P:maturation of 5S rRNA
GO:0009933--P:meristem structural organization
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0010087--P:phloem or xylem histogenesis
GO:0048528--P:post-embryonic root development
GO:0048364--P:root development
GO:0048367--P:shoot system development
GO:0000387--P:spliceosomal snRNP assembly

KEGG

ath:AT5G16780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000964	Aegilops tauschii	58.18	4.00e-163	567.00
IUUC-Aml-001506	Ailuropoda melanoleuca	41.05	2.00e-27	117.00
IUUC-Atr-003123	Amborella trichopoda	55.60	1.00e-176	613.00
IUUC-Apl-004159	Anas platyrhynchos	48.78	7.00e-05	37.70
IUUC-Aca-004800	Anolis carolinensis	28.50	6.00e-08	51.60
IUUC-Aly-006240	Arabidopsis lyrata	94.84	0.00e+00	1159.00
IUUC-Ago-007952	Ashbya gossypii	37.50	2.30e+00	26.60
IUUC-Acl-008063	Aspergillus clavatus	61.11	8.00e-09	55.10
IUUC-Afl-008404	Aspergillus flavus	61.11	7.00e-09	55.10
IUUC-Afu-008933	Aspergillus fumigatus	61.11	8.00e-09	55.10
IUUC-Ani-009378	Aspergillus nidulans	61.11	1.00e-08	54.30
IUUC-Ang-009865	Aspergillus niger	58.33	9.00e-08	51.60
IUUC-Aor-010214	Aspergillus oryzae	61.11	7.00e-09	55.10
IUUC-Ate-010446	Aspergillus terreus	58.33	2.00e-08	53.50
IUUC-Ame-010802	Astyanax mexicanus	45.28	4.00e-21	95.90
IUUC-Bgr-012139	Blumeria graminis	51.06	2.00e-09	57.00
IUUC-Bta-012547	Bos taurus	41.05	1.00e-27	117.00
IUUC-Bci-013790	Botrytis cinerea	48.94	3.00e-08	53.10
IUUC-Bdi-014958	Brachypodium distachyon	56.97	3.00e-166	578.00
IUUC-Bol-015305	Brassica oleracea	84.80	0.00e+00	927.00
IUUC-Bra-017189	Brassica rapa	83.50	0.00e+00	924.00
IUUC-Cel-018249	Caenorhabditis elegans	33.94	5.00e-15	75.90
IUUC-Cja-019388	Callithrix jacchus	29.33	1.00e-06	47.80
IUUC-Cfa-020033	Canis familiaris	41.80	2.00e-27	117.00
IUUC-Cpo-021917	Cavia porcellus	44.10	3.00e-27	116.00
IUUC-Csa-023428	Chlorocebus sabaeus	41.05	2.00e-27	117.00
IUUC-Cho-024341	Choloepus hoffmanni	28.57	4.00e-03	35.40
IUUC-Cin-025700	Ciona intestinalis	39.38	8.00e-21	95.10
IUUC-Csv-025826	Ciona savignyi	41.21	1.00e-21	97.40
IUUC-Cgl-026437	Colletotrichum gloeosporioides	48.94	2.00e-08	53.90
IUUC-Cne-026786	Cryptococcus neoformans	34.48	1.00e-16	80.90
IUUC-Dre-027384	Danio rerio	41.03	4.00e-23	102.00
IUUC-Dno-029891	Dasypus novemcinctus	29.13	1.00e-10	60.80
IUUC-Dor-030843	Dipodomys ordii	41.05	2.00e-27	117.00
IUUC-Dse-031367	Dothistroma septosporum	53.06	4.00e-09	56.20
IUUC-Dme-032008	Drosophila melanogaster	36.63	4.00e-21	96.70
IUUC-Eca-033761	Equus caballus	41.05	3.00e-26	112.00
IUUC-Fca-035723	Felis catus	41.05	1.00e-27	117.00
IUUC-Fal-037187	Ficedula albicollis	29.55	9.40e-01	27.30
IUUC-Fox-037689	Fusarium oxysporum	29.73	3.00e-03	36.20
IUUC-Fso-038345	Fusarium solani	47.30	1.00e-10	60.80
IUUC-Ggr-040049	Gaeumannomyces graminis	24.73	7.00e-08	52.00
IUUC-Gac-042388	Gasterosteus aculeatus	43.40	8.00e-22	98.60
IUUC-Gma-043036	Glycine max	68.10	0.00e+00	704.00
IUUC-Ggo-044803	Gorilla gorilla	41.05	2.00e-27	117.00
IUUC-Hsa-046668	Homo sapiens	41.05	2.00e-27	117.00
IUUC-Hvu-047161	Hordeum vulgare	62.08	8.00e-86	310.00
IUUC-Itr-049078	Ictidomys tridecemlineatus	41.05	2.00e-27	117.00
IUUC-Kpa-049385	Komagataella pastoris	29.63	1.00e-03	37.40
IUUC-Lch-049555	Latimeria chalumnae	41.71	5.00e-24	105.00
IUUC-Lpe-051037	Leersia perrieri	58.95	8.00e-138	483.00
IUUC-Loc-051839	Lepisosteus oculatus	43.48	2.00e-23	103.00
IUUC-Lma-053225	Leptosphaeria maculans	46.34	5.00e-06	45.80
IUUC-Laf-054002	Loxodonta africana	41.05	1.00e-27	117.00
IUUC-Mcc-054874	Macaca mulatta	28.23	7.00e-07	48.10
IUUC-Meu-056111	Macropus eugenii	41.05	1.00e-27	117.00
IUUC-Mor-056976	Magnaporthe oryzae	46.00	4.00e-07	49.30
IUUC-Mpo-057459	Magnaporthe poae	25.71	1.00e-06	48.10
IUUC-Mtr-058022	Medicago truncatula	65.54	0.00e+00	676.00
IUUC-Mla-058969	Melampsora laricipopulina	36.47	2.00e-11	64.30
IUUC-Mvi-060539	Microbotryum violaceum	35.48	2.00e-10	60.80
IUUC-Mmr-060674	Microcebus murinus	41.05	2.00e-27	117.00
IUUC-Mdo-063085	Monodelphis domestica	41.05	1.00e-27	117.00
IUUC-Mmu-064142	Mus musculus	41.05	2.00e-27	117.00
IUUC-Mac-065346	Musa acuminata	62.97	0.00e+00	641.00
IUUC-Mpu-065862	Mustela putorius furo	41.05	1.00e-27	117.00
IUUC-Mlu-067452	Myotis lucifugus	41.05	2.00e-27	117.00
IUUC-Nfi-068481	Neosartorya fischeri	58.33	2.00e-08	53.90
IUUC-Ncr-068693	Neurospora crassa	54.29	2.00e-04	40.40
IUUC-Nle-069029	Nomascus leucogenys	41.05	2.00e-27	117.00
IUUC-Opr-070634	Ochotona princeps	31.03	4.00e-04	39.70
IUUC-Ont-071869	Oreochromis niloticus	44.94	7.00e-24	105.00
IUUC-Oba-075629	Oryza barthii	57.49	2.00e-155	542.00
IUUC-Obr-076112	Oryza brachyantha	58.92	6.00e-151	527.00
IUUC-Ogl-077004	Oryza glaberrima	57.23	4.00e-155	541.00
IUUC-Ogu-079015	Oryza glumaepatula	57.38	2.00e-156	545.00
IUUC-Oin-079550	Oryza indica	57.23	1.00e-155	543.00
IUUC-Olo-080458	Oryza longistaminata	57.38	6.00e-156	543.00
IUUC-Ome-081108	Oryza meridionalis	57.12	1.00e-157	550.00
IUUC-Oni-082526	Oryza nivara	55.90	7.00e-137	480.00
IUUC-Opu-084013	Oryza punctata	58.54	3.00e-146	511.00
IUUC-Oru-084776	Oryza rufipogon	57.38	5.00e-156	544.00
IUUC-Osa-085489	Oryza sativa	55.93	3.00e-84	304.00
IUUC-Olu-087878	Ostreococcus lucimarinus	48.42	3.00e-14	73.60
IUUC-Oga-088247	Otolemur garnettii	41.05	2.00e-27	117.00
IUUC-Oar-089536	Ovis aries	41.05	2.00e-27	117.00
IUUC-Ptr-091206	Pan troglodytes	44.10	3.00e-27	116.00
IUUC-Pan-092864	Papio anubis	41.05	2.00e-27	117.00
IUUC-Psi-093374	Pelodiscus sinensis	41.18	9.00e-28	118.00
IUUC-Pma-094762	Petromyzon marinus	42.17	1.00e-26	113.00
IUUC-Pno-095018	Phaeosphaeria nodorum	42.86	2.00e-06	47.40
IUUC-Ppa-095669	Physcomitrella patens	44.11	1.00e-106	380.00
IUUC-Pfo-097032	Poecilia formosa	41.67	7.00e-21	95.10
IUUC-Pab-098379	Pongo abelii	41.05	1.00e-27	117.00
IUUC-Pop-099004	Populus trichocarpa	72.35	1.00e-97	349.00
IUUC-Pca-100431	Procavia capensis	60.94	2.00e-16	80.90
IUUC-Ppe-101183	Prunus persica	60.59	0.00e+00	691.00
IUUC-Pva-102356	Pteropus vampyrus	58.33	3.00e-26	112.00
IUUC-Pgr-103413	Puccinia graminis	50.62	5.00e-10	59.30
IUUC-Ptt-103789	Puccinia triticina	34.10	8.00e-12	65.50
IUUC-Pte-104255	Pyrenophora teres	40.00	2.00e-06	46.60
IUUC-Pyt-104629	Pyrenophora triticirepentis	40.00	2.00e-06	47.00
IUUC-Rno-105629	Rattus norvegicus	41.05	2.00e-27	117.00
IUUC-Sce-106185	Saccharomyces cerevisiae	55.17	1.10e-02	34.30
IUUC-Sha-107543	Sarcophilus harrisii	41.05	1.00e-27	117.00
IUUC-Sja-107921	Schizosaccharomyces japonicus	28.72	2.00e-11	63.20
IUUC-Spo-108313	Schizosaccharomyces pombe	61.11	6.00e-07	48.90
IUUC-Smo-109391	Selaginella moellendorffii	50.92	3.00e-66	245.00
IUUC-Sit-109967	Setaria italica	56.41	6.00e-155	540.00
IUUC-Sly-111069	Solanum lycopersicum	62.60	5.00e-138	483.00
IUUC-Stu-112178	Solanum tuberosum	62.25	1.00e-166	579.00
IUUC-Sbi-114103	Sorghum bicolor	55.98	2.00e-73	268.00
IUUC-Sre-115231	Sporisorium reilianum	29.38	9.00e-14	72.00
IUUC-Ssc-116400	Sus scrofa	41.05	1.00e-27	117.00
IUUC-Tca-121799	Theobroma cacao	64.99	0.00e+00	732.00
IUUC-Tre-121898	Trichoderma reesei	48.94	3.00e-07	49.70
IUUC-Tvi-122645	Trichoderma virens	32.82	3.00e-08	53.10
IUUC-Tae-125176	Triticum aestivum	46.26	5.00e-45	173.00
IUUC-Tur-125962	Triticum urartu	55.90	3.00e-164	571.00
IUUC-Tme-127093	Tuber melanosporum	31.93	9.00e-10	58.20
IUUC-Tbe-127595	Tupaia belangeri	39.25	2.00e-24	107.00
IUUC-Ttr-128741	Tursiops truncatus	41.05	1.00e-27	117.00
IUUC-Uma-129451	Ustilago maydis	40.66	4.00e-12	66.60
IUUC-Vda-129960	Verticillium dahliae	57.14	1.00e-10	61.20
IUUC-Vvi-131408	Vitis vinifera	66.41	0.00e+00	787.00
IUUC-Xtr-132475	Xenopus tropicalis	43.04	4.00e-26	112.00
IUUC-Xma-133174	Xiphophorus maculatus	44.44	2.00e-20	94.00
IUUC-Yli-134329	Yarrowia lipolytica	39.66	1.00e-06	47.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence