iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091135

Ensembl Protein ID

ENSPTRP00000016495.5

UniProt Accession

H2QDY9; H2QDY9_PANTR

Genbank Protein ID

ENSPTRP00000016495

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03109976

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000009699.5	ENSPTRT00000017804.5	ENSPTRP00000016495.5

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	36.67	3.00e-31	135.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MATGSAQGNF TGHTKKTNGN NGTNGALVQS PSNQSALGAG GANSNGSAAR VWGVATGSSS 60
GLAHCSVSGG DGKMDTMIGD GRSQNCWGAS NSNAGINLNL NPNANPAAWP VLGHEGTVAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACAG GGAGTGCCCA GGGCAACTTC ACTGGACATA CCAAGAAGAC AAATGGCAAT 60
AATGGCACCA ATGGCGCACT CGTCCAAAGC CCTTCTAATC AGAGTGCCCT TGGAGCAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	42.47	0.00e+00	754.00
IUUC-Apl-003191	Anas platyrhynchos	85.73	0.00e+00	2180.00
IUUC-Aca-004717	Anolis carolinensis	86.46	0.00e+00	2194.00
IUUC-Ame-010681	Astyanax mexicanus	49.82	0.00e+00	799.00
IUUC-Bta-012915	Bos taurus	36.80	8.00e-100	359.00
IUUC-Cja-019614	Callithrix jacchus	94.38	0.00e+00	2338.00
IUUC-Cfa-020452	Canis familiaris	37.20	1.00e-106	382.00
IUUC-Cpo-021452	Cavia porcellus	88.66	0.00e+00	2300.00
IUUC-Csa-023169	Chlorocebus sabaeus	42.40	0.00e+00	738.00
IUUC-Cho-024655	Choloepus hoffmanni	39.90	2.00e-119	424.00
IUUC-Dre-028059	Danio rerio	56.51	0.00e+00	1039.00
IUUC-Dno-029734	Dasypus novemcinctus	41.06	0.00e+00	723.00
IUUC-Dor-030671	Dipodomys ordii	43.94	0.00e+00	663.00
IUUC-Dme-032014	Drosophila melanogaster	43.64	4.00e-24	107.00
IUUC-Ete-032774	Echinops telfairi	79.32	0.00e+00	1446.00
IUUC-Eca-033866	Equus caballus	89.07	0.00e+00	2187.00
IUUC-Eeu-034572	Erinaceus europaeus	55.09	5.00e-40	160.00
IUUC-Fal-036856	Ficedula albicollis	84.57	0.00e+00	2021.00
IUUC-Gga-040531	Gallus gallus	86.22	0.00e+00	2129.00
IUUC-Gac-041681	Gasterosteus aculeatus	51.79	0.00e+00	864.00
IUUC-Ggo-045143	Gorilla gorilla	95.32	0.00e+00	2399.00
IUUC-Hsa-045913	Homo sapiens	96.96	0.00e+00	2399.00
IUUC-Lch-049619	Latimeria chalumnae	52.17	7.00e-98	353.00
IUUC-Loc-052289	Lepisosteus oculatus	68.71	0.00e+00	1046.00
IUUC-Laf-053607	Loxodonta africana	88.75	0.00e+00	2273.00
IUUC-Mcc-055342	Macaca mulatta	96.43	0.00e+00	2329.00
IUUC-Meu-056275	Macropus eugenii	50.69	4.00e-97	350.00
IUUC-Mtr-058185	Medicago truncatula	44.44	1.00e-03	38.10
IUUC-Mga-059241	Meleagris gallopavo	39.08	5.00e-115	409.00
IUUC-Mmr-061348	Microcebus murinus	37.05	8.00e-102	365.00
IUUC-Mdo-062155	Monodelphis domestica	83.81	0.00e+00	2203.00
IUUC-Mmu-064259	Mus musculus	44.50	0.00e+00	720.00
IUUC-Mpu-066534	Mustela putorius furo	53.92	1.00e-81	298.00
IUUC-Mlu-067834	Myotis lucifugus	41.47	0.00e+00	754.00
IUUC-Nle-069168	Nomascus leucogenys	41.97	0.00e+00	717.00
IUUC-Opr-070976	Ochotona princeps	36.07	1.00e-80	295.00
IUUC-Ocu-074534	Oryctolagus cuniculus	73.97	0.00e+00	766.00
IUUC-Oga-088116	Otolemur garnettii	41.75	0.00e+00	741.00
IUUC-Oar-090041	Ovis aries	36.50	4.00e-99	357.00
IUUC-Pan-092665	Papio anubis	98.94	0.00e+00	2348.00
IUUC-Psi-093057	Pelodiscus sinensis	83.87	0.00e+00	2117.00
IUUC-Pma-094508	Petromyzon marinus	44.26	4.00e-50	192.00
IUUC-Pfo-097115	Poecilia formosa	55.82	0.00e+00	658.00
IUUC-Pab-097935	Pongo abelii	42.25	0.00e+00	746.00
IUUC-Pca-100481	Procavia capensis	78.01	0.00e+00	1237.00
IUUC-Pva-102376	Pteropus vampyrus	36.99	2.00e-73	271.00
IUUC-Rno-105508	Rattus norvegicus	37.13	1.00e-100	362.00
IUUC-Sar-113036	Sorex araneus	59.41	5.00e-41	164.00
IUUC-Sbi-114163	Sorghum bicolor	30.88	1.30e-01	31.60
IUUC-Ssc-115574	Sus scrofa	69.86	0.00e+00	1467.00
IUUC-Tgu-117233	Taeniopygia guttata	85.32	0.00e+00	2052.00
IUUC-Tru-117725	Takifugu rubripes	53.39	0.00e+00	943.00
IUUC-Tsy-118786	Tarsius syrichta	37.55	1.00e-71	265.00
IUUC-Tae-123684	Triticum aestivum	37.93	6.30e-02	32.30
IUUC-Tbe-127989	Tupaia belangeri	83.51	0.00e+00	885.00
IUUC-Ttr-128518	Tursiops truncatus	88.84	0.00e+00	2279.00
IUUC-Vpa-130230	Vicugna pacos	43.26	2.00e-73	271.00
IUUC-Xtr-132265	Xenopus tropicalis	71.72	0.00e+00	1752.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence