iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cledf  kd++ vlpC+H+fh++Cl kw         +  CP C+
   Q: 69   CAVCLEDFkgKDELGVLPCQHAFHRKCLVKW------LEVRCVCPMCN 110
           ********99778******************......999999****7 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPPISFQTFP LKSTWSSSAL ASLSLCSVLI FCCYFISKLR NQAQSERYGY KEVVLKGDAK 60
KLQLYGQTCA VCLEDFKGKD ELGVLPCQHA FHRKCLVKWL EVRCVCPMCN KPIAGPTETS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGTGTCAG TTTTCGGAAT CCCAGCGCGC ACTGCTCGGA GAGGAGGGAC CCAAGCCCGG 60
CTTCGTGTCC CGGCTGCTCC TTCTCGGCCG GGCATCCCGG CTCTCTCTGC TGCCCTCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000179	Aegilops tauschii	57.78	8.00e-13	64.70
IUUC-Aml-002066	Ailuropoda melanoleuca	82.44	2.00e-59	220.00
IUUC-Apl-003691	Anas platyrhynchos	73.28	2.00e-47	181.00
IUUC-Aca-004989	Anolis carolinensis	77.10	1.00e-55	207.00
IUUC-Ame-011731	Astyanax mexicanus	70.99	1.00e-51	195.00
IUUC-Bta-012760	Bos taurus	82.44	3.00e-58	216.00
IUUC-Cja-019442	Callithrix jacchus	81.68	4.00e-59	219.00
IUUC-Cfa-021257	Canis familiaris	83.21	5.00e-60	223.00
IUUC-Cpo-021821	Cavia porcellus	81.68	7.00e-59	219.00
IUUC-Csa-023926	Chlorocebus sabaeus	81.68	4.00e-59	219.00
IUUC-Cho-024763	Choloepus hoffmanni	92.55	2.00e-49	186.00
IUUC-Cin-025407	Ciona intestinalis	42.48	3.00e-18	84.30
IUUC-Csv-026249	Ciona savignyi	43.36	3.00e-19	87.40
IUUC-Cme-027308	Cyanidioschyzon merolae	36.00	6.00e-09	56.20
IUUC-Dre-028547	Danio rerio	70.23	4.00e-51	193.00
IUUC-Dno-029352	Dasypus novemcinctus	81.68	2.00e-58	218.00
IUUC-Dor-030113	Dipodomys ordii	97.87	3.00e-51	192.00
IUUC-Ete-032590	Echinops telfairi	68.70	2.00e-48	184.00
IUUC-Eca-033808	Equus caballus	83.21	1.00e-59	221.00
IUUC-Eeu-035101	Erinaceus europaeus	80.92	4.00e-58	216.00
IUUC-Fca-035925	Felis catus	83.21	1.00e-59	221.00
IUUC-Fal-036814	Ficedula albicollis	55.75	8.00e-31	126.00
IUUC-Gmo-038545	Gadus morhua	74.81	4.00e-53	199.00
IUUC-Gga-041003	Gallus gallus	70.99	6.00e-51	192.00
IUUC-Gac-042633	Gasterosteus aculeatus	68.24	2.00e-25	107.00
IUUC-Gma-042725	Glycine max	45.76	5.00e-11	62.00
IUUC-Ggo-044530	Gorilla gorilla	55.75	7.00e-31	126.00
IUUC-Hsa-047006	Homo sapiens	81.68	1.00e-58	218.00
IUUC-Itr-048723	Ictidomys tridecemlineatus	80.92	3.00e-57	213.00
IUUC-Lch-049966	Latimeria chalumnae	53.91	2.00e-29	121.00
IUUC-Loc-052517	Lepisosteus oculatus	77.10	2.00e-54	204.00
IUUC-Laf-053986	Loxodonta africana	80.92	7.00e-57	212.00
IUUC-Mcc-054860	Macaca mulatta	81.68	4.00e-59	219.00
IUUC-Meu-056640	Macropus eugenii	68.70	8.00e-44	169.00
IUUC-Mla-059067	Melampsora laricipopulina	39.53	8.00e-08	52.80
IUUC-Mga-059784	Meleagris gallopavo	52.13	7.00e-21	92.80
IUUC-Mmr-061260	Microcebus murinus	81.95	7.00e-59	219.00
IUUC-Mdo-062793	Monodelphis domestica	80.15	2.00e-57	214.00
IUUC-Mmu-063949	Mus musculus	85.50	8.00e-61	225.00
IUUC-Mpu-066068	Mustela putorius furo	83.21	1.00e-59	221.00
IUUC-Mlu-067176	Myotis lucifugus	82.44	5.00e-59	219.00
IUUC-Nle-069924	Nomascus leucogenys	80.92	4.00e-58	216.00
IUUC-Opr-070985	Ochotona princeps	82.44	2.00e-57	214.00
IUUC-Ont-071718	Oreochromis niloticus	68.24	3.00e-25	107.00
IUUC-Oan-073727	Ornithorhynchus anatinus	78.63	2.00e-56	210.00
IUUC-Ocu-074776	Oryctolagus cuniculus	83.97	2.00e-60	224.00
IUUC-Obr-076171	Oryza brachyantha	44.26	3.00e-12	65.10
IUUC-Ome-081724	Oryza meridionalis	46.15	3.00e-11	63.90
IUUC-Ola-087147	Oryzias latipes	74.81	3.00e-53	200.00
IUUC-Oga-087917	Otolemur garnettii	83.97	5.00e-60	223.00
IUUC-Oar-089739	Ovis aries	83.97	2.00e-60	224.00
IUUC-Ptr-090619	Pan troglodytes	81.68	1.00e-58	218.00
IUUC-Pan-092854	Papio anubis	81.68	4.00e-59	219.00
IUUC-Psi-093254	Pelodiscus sinensis	74.26	1.00e-38	152.00
IUUC-Pma-094708	Petromyzon marinus	67.11	2.00e-24	103.00
IUUC-Pfo-096899	Poecilia formosa	75.57	2.00e-53	201.00
IUUC-Pab-097858	Pongo abelii	82.44	2.00e-59	220.00
IUUC-Pca-100210	Procavia capensis	81.68	1.00e-58	218.00
IUUC-Pva-102677	Pteropus vampyrus	80.92	6.00e-57	212.00
IUUC-Pgr-103344	Puccinia graminis	41.54	8.00e-10	56.20
IUUC-Sha-107332	Sarcophilus harrisii	80.92	5.00e-58	216.00
IUUC-Sar-113175	Sorex araneus	73.12	3.00e-35	139.00
IUUC-Ssc-115896	Sus scrofa	82.44	1.00e-57	215.00
IUUC-Tgu-117344	Taeniopygia guttata	52.13	2.00e-21	93.60
IUUC-Tru-118255	Takifugu rubripes	69.77	2.00e-46	177.00
IUUC-Tsy-119575	Tarsius syrichta	82.44	2.00e-59	221.00
IUUC-Tni-120329	Tetraodon nigroviridis	67.44	1.00e-44	172.00
IUUC-Tbe-127610	Tupaia belangeri	43.01	4.00e-14	69.30
IUUC-Ttr-128649	Tursiops truncatus	82.44	6.00e-59	219.00
IUUC-Vpa-130174	Vicugna pacos	61.17	5.00e-30	122.00
IUUC-Xtr-132561	Xenopus tropicalis	54.87	7.00e-30	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence