iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110964

Ensembl Protein ID

Solyc11g011980.1.1

UniProt Accession

K4D603; K4D603_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g011980.1	Solyc11g011980.1.1	Solyc11g011980.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.40e-07	31.5	42	101
E3 adaptor/Cullin RING/DCX/DWD	1.40e-26	92.2	544	581

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrl 64
           ++ lCpI +++ +d   +++G+++   +I  +l+++   cP +++ lt + l Pn  l +l
   Q: 42   KDILCPICMQIIKDAFLTACGHSFCYMCIVTHLQNKSD-CPCCSHYLTTNHLYPNFLLNKL 101
           6789*********************************9.****************988665 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH   v+ ++f s+  l+s+s D t+++WD+ ++v+l+
   Q: 544  GHRKAVSYVKFlSNYELASASTDSTLRLWDVNENVPLR 581
           79999******98788***************9999887 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGGGEGNLVG VLVPTVNAGE TSAPAAGTEV VVVKTEEEEV DKDILCPICM QIIKDAFLTA 60
CGHSFCYMCI VTHLQNKSDC PCCSHYLTTN HLYPNFLLNK LLMKKSARQM AKSATPVEQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGGAG GAGAGGGTAA TTTAGTGGGA GTTTTAGTGC CGACTGTGAA CGCCGGTGAA 60
ACTTCAGCTC CGGCGGCTGG GACGGAGGTG GTGGTGGTGA AGACGGAGGA AGAGGAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sly:101249698

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001265	Ailuropoda melanoleuca	40.37	4.00e-130	457.00
IUUC-Apl-003796	Anas platyrhynchos	40.22	2.00e-124	439.00
IUUC-Aca-005078	Anolis carolinensis	40.09	3.00e-128	452.00
IUUC-Ame-011176	Astyanax mexicanus	60.33	4.00e-41	162.00
IUUC-Bta-012595	Bos taurus	40.49	1.00e-130	459.00
IUUC-Cja-018926	Callithrix jacchus	40.43	7.00e-131	460.00
IUUC-Cfa-021088	Canis familiaris	40.43	1.00e-130	459.00
IUUC-Cpo-022442	Cavia porcellus	40.32	4.00e-125	441.00
IUUC-Csa-024119	Chlorocebus sabaeus	40.34	8.00e-130	457.00
IUUC-Dre-028453	Danio rerio	39.97	7.00e-126	443.00
IUUC-Dno-029887	Dasypus novemcinctus	40.43	2.00e-130	459.00
IUUC-Eca-034403	Equus caballus	40.06	2.00e-124	438.00
IUUC-Fca-036475	Felis catus	40.38	6.00e-125	440.00
IUUC-Fal-037189	Ficedula albicollis	40.31	2.00e-129	455.00
IUUC-Gga-040806	Gallus gallus	40.12	1.00e-129	456.00
IUUC-Ggo-044430	Gorilla gorilla	37.47	1.00e-83	303.00
IUUC-Hsa-045853	Homo sapiens	40.43	1.00e-130	459.00
IUUC-Lch-050420	Latimeria chalumnae	40.86	1.00e-127	449.00
IUUC-Laf-053775	Loxodonta africana	40.22	2.00e-130	458.00
IUUC-Mla-059097	Melampsora laricipopulina	25.29	4.00e-14	73.60
IUUC-Mga-059646	Meleagris gallopavo	40.06	6.00e-124	437.00
IUUC-Mmr-060990	Microcebus murinus	40.37	7.00e-130	457.00
IUUC-Mdo-062287	Monodelphis domestica	40.28	4.00e-130	457.00
IUUC-Mmu-064097	Mus musculus	40.58	3.00e-131	461.00
IUUC-Mpu-066612	Mustela putorius furo	40.38	4.00e-125	441.00
IUUC-Mlu-067967	Myotis lucifugus	40.26	2.00e-123	435.00
IUUC-Nle-069543	Nomascus leucogenys	40.43	2.00e-130	459.00
IUUC-Oan-073409	Ornithorhynchus anatinus	40.16	4.00e-123	434.00
IUUC-Ocu-073756	Oryctolagus cuniculus	40.57	2.00e-126	445.00
IUUC-Ola-086727	Oryzias latipes	39.78	9.00e-128	450.00
IUUC-Oga-088215	Otolemur garnettii	40.45	9.00e-127	446.00
IUUC-Oar-089880	Ovis aries	40.45	1.00e-126	446.00
IUUC-Ptr-090597	Pan troglodytes	40.43	1.00e-130	459.00
IUUC-Pan-091987	Papio anubis	40.43	1.00e-130	459.00
IUUC-Psi-094033	Pelodiscus sinensis	40.03	1.00e-125	442.00
IUUC-Pab-098029	Pongo abelii	40.43	1.00e-130	459.00
IUUC-Ppe-101250	Prunus persica	67.71	0.00e+00	881.00
IUUC-Pva-102407	Pteropus vampyrus	40.28	6.00e-127	447.00
IUUC-Rno-105312	Rattus norvegicus	40.43	2.00e-130	458.00
IUUC-Stu-112882	Solanum tuberosum	93.30	0.00e+00	1253.00
IUUC-Ssc-115987	Sus scrofa	30.14	1.00e-32	132.00
IUUC-Tgu-116471	Taeniopygia guttata	40.06	7.00e-129	453.00
IUUC-Tru-118231	Takifugu rubripes	40.16	2.00e-120	426.00
IUUC-Tsy-119415	Tarsius syrichta	39.66	3.00e-122	431.00
IUUC-Ttr-129100	Tursiops truncatus	40.28	8.00e-123	433.00
IUUC-Vpa-130613	Vicugna pacos	36.06	3.00e-106	378.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence