iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132127

Ensembl Protein ID

ENSXETP00000028841.4

UniProt Accession

F7D9I1; F7D9I1_XENTR

Genbank Protein ID

ENSXETP00000028841

Protein Name

Interferon-induced, with helicase C domain 1

Genbank Nucleotide ID

AAMC01021038

Gene Name

ifih1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000013176.4	ENSXETT00000028841.4	ENSXETP00000028841.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/CARD	1.30e-14	54.6	13	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/CARD

   S: 7    lllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL...vqkegWfrefl 73
           +l++++++r++++++ ++vld  l+ +l     e+ +  a+++g+ +aa+lLL ++     + gWf +f+
   Q: 13   YLIECFRARLVRYIQAVPVLD-HLT-WLGRDIREQVVSKAQNQGEQDAARLLLDRIvrgPREPGWFEAFV 80
           89*******************.***.******************************9988999***9996 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MPQNDSEDAR GIYLIECFRA RLVRYIQAVP VLDHLTWLGR DIREQVVSKA QNQGEQDAAR 60
LLLDRIVRGP REPGWFEAFV RALKDSHCTQ AAAYLSEGRP TPSLEATWDY YEQLLIVLYP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCCAGA ACGACAGTGA AGACGCAAGG GGCATATACC TGATAGAGTG CTTCAGGGCC 60
CGGCTGGTCA GGTACATCCA GGCGGTACCG GTACTGGACC ATCTCACCTG GCTGGGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR031964--CARD_dom
IPR011029--DEATH-like_dom
IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001336	Ailuropoda melanoleuca	52.36	0.00e+00	988.00
IUUC-Apl-003900	Anas platyrhynchos	55.28	0.00e+00	1087.00
IUUC-Aca-005329	Anolis carolinensis	52.67	0.00e+00	933.00
IUUC-Ame-011305	Astyanax mexicanus	47.18	0.00e+00	864.00
IUUC-Bta-012361	Bos taurus	53.12	0.00e+00	989.00
IUUC-Cja-018760	Callithrix jacchus	52.65	0.00e+00	942.00
IUUC-Cfa-020321	Canis familiaris	52.18	0.00e+00	973.00
IUUC-Cpo-022450	Cavia porcellus	52.25	0.00e+00	969.00
IUUC-Cre-022916	Chlamydomonas reinhardtii	31.97	5.00e-11	63.50
IUUC-Csa-024194	Chlorocebus sabaeus	53.90	0.00e+00	953.00
IUUC-Cho-024364	Choloepus hoffmanni	49.38	0.00e+00	660.00
IUUC-Dre-028305	Danio rerio	54.38	0.00e+00	711.00
IUUC-Dno-029831	Dasypus novemcinctus	59.95	0.00e+00	890.00
IUUC-Dor-030410	Dipodomys ordii	61.19	0.00e+00	751.00
IUUC-Ete-032950	Echinops telfairi	54.86	4.00e-137	482.00
IUUC-Eca-034279	Equus caballus	53.60	0.00e+00	990.00
IUUC-Eeu-034678	Erinaceus europaeus	51.81	0.00e+00	971.00
IUUC-Fca-035618	Felis catus	57.97	0.00e+00	654.00
IUUC-Fal-037106	Ficedula albicollis	61.47	0.00e+00	899.00
IUUC-Fso-038398	Fusarium solani	25.58	4.00e-28	120.00
IUUC-Gmo-038598	Gadus morhua	49.78	0.00e+00	677.00
IUUC-Ggr-039877	Gaeumannomyces graminis	36.51	1.60e+00	28.10
IUUC-Gga-040467	Gallus gallus	53.16	0.00e+00	1045.00
IUUC-Gac-042316	Gasterosteus aculeatus	46.50	0.00e+00	845.00
IUUC-Ggo-045461	Gorilla gorilla	54.28	0.00e+00	963.00
IUUC-Hsa-045771	Homo sapiens	53.87	0.00e+00	960.00
IUUC-Itr-048762	Ictidomys tridecemlineatus	53.04	0.00e+00	979.00
IUUC-Lch-049913	Latimeria chalumnae	61.71	0.00e+00	894.00
IUUC-Loc-052768	Lepisosteus oculatus	53.06	0.00e+00	998.00
IUUC-Laf-053933	Loxodonta africana	53.36	0.00e+00	975.00
IUUC-Mcc-054695	Macaca mulatta	53.80	0.00e+00	952.00
IUUC-Meu-056829	Macropus eugenii	54.16	0.00e+00	799.00
IUUC-Mga-059205	Meleagris gallopavo	53.56	0.00e+00	1045.00
IUUC-Mvi-060497	Microbotryum violaceum	33.33	8.00e-18	86.70
IUUC-Mmr-060703	Microcebus murinus	60.81	0.00e+00	878.00
IUUC-Mdo-063079	Monodelphis domestica	51.80	0.00e+00	1011.00
IUUC-Mmu-064066	Mus musculus	52.14	0.00e+00	972.00
IUUC-Mpu-066261	Mustela putorius furo	59.73	0.00e+00	890.00
IUUC-Mlu-068196	Myotis lucifugus	51.88	0.00e+00	990.00
IUUC-Nle-069479	Nomascus leucogenys	52.22	0.00e+00	926.00
IUUC-Opr-070717	Ochotona princeps	49.07	0.00e+00	709.00
IUUC-Ont-071702	Oreochromis niloticus	47.01	0.00e+00	874.00
IUUC-Oan-073639	Ornithorhynchus anatinus	54.49	0.00e+00	937.00
IUUC-Ocu-074521	Oryctolagus cuniculus	53.22	0.00e+00	988.00
IUUC-Ola-086351	Oryzias latipes	46.43	0.00e+00	839.00
IUUC-Oga-088539	Otolemur garnettii	53.26	0.00e+00	976.00
IUUC-Oar-090186	Ovis aries	53.17	0.00e+00	974.00
IUUC-Ptr-090575	Pan troglodytes	52.80	0.00e+00	942.00
IUUC-Pan-092371	Papio anubis	53.80	0.00e+00	951.00
IUUC-Psi-093072	Pelodiscus sinensis	54.30	0.00e+00	1059.00
IUUC-Pma-094345	Petromyzon marinus	41.97	4.00e-93	335.00
IUUC-Pfo-096401	Poecilia formosa	54.30	0.00e+00	726.00
IUUC-Pab-097623	Pongo abelii	53.38	0.00e+00	954.00
IUUC-Pca-100993	Procavia capensis	48.89	0.00e+00	789.00
IUUC-Ppe-101718	Prunus persica	41.18	8.40e-01	28.90
IUUC-Pva-102227	Pteropus vampyrus	55.89	0.00e+00	788.00
IUUC-Pgr-103529	Puccinia graminis	26.46	2.00e-29	125.00
IUUC-Rno-105198	Rattus norvegicus	52.20	0.00e+00	974.00
IUUC-Sha-107622	Sarcophilus harrisii	54.27	0.00e+00	1025.00
IUUC-Sar-113625	Sorex araneus	57.98	9.00e-102	364.00
IUUC-Tgu-117486	Taeniopygia guttata	51.70	0.00e+00	997.00
IUUC-Tru-118445	Takifugu rubripes	44.81	0.00e+00	825.00
IUUC-Tsy-119512	Tarsius syrichta	60.00	0.00e+00	813.00
IUUC-Tni-120711	Tetraodon nigroviridis	44.66	0.00e+00	827.00
IUUC-Tbe-127644	Tupaia belangeri	47.44	0.00e+00	845.00
IUUC-Ttr-128989	Tursiops truncatus	50.05	0.00e+00	932.00
IUUC-Vpa-130587	Vicugna pacos	52.77	0.00e+00	831.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence