iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131487

Ensembl Protein ID

VIT_05s0051g00350.t01

UniProt Accession

D7TS58; D7TS58_VITVI

Genbank Protein ID

CBI33330.3

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

FN596241

Gene Name

ING1; VIT_05s0051g00350

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_05s0051g00350	VIT_05s0051g00350.t01	VIT_05s0051g00350.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-08	35.4	180	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C++ + +e  +v C++  C+ ewfH++C++ +   e+p+   w+C++C 
   Q: 180  TYC-ICDQVSYGE--MVACDNpdCKiEWFHFGCVGVK---ERPKGA-WYCSDCI 226
           69*.*******99..**********************...999996.******5 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MFNYSDLESL PNVLQRKYAL LRDLDKSLQE IQRQNEQRCE QEIEDIKQGV KSGNITPDPS 60
LIRFSDEALD EQKHSIRIAD EKVALAVQAY DLVDTHIQQL DQYLRKFDED IRRERDGIAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCAACACA AGCCAATAAG GTCCTTCCTC CTTCGAAGCA ATATATTAAA CCTGAAGGGA 60
CCAACTGGTA AATAAAGAAG GGTGTGAAAC AAAATTAGTA GCTTTTACAG GGACTATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

vvi:100266689

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002381	Ailuropoda melanoleuca	36.25	1.00e-35	142.00
IUUC-Atr-002906	Amborella trichopoda	62.93	1.00e-75	274.00
IUUC-Apl-003516	Anas platyrhynchos	41.57	9.00e-34	135.00
IUUC-Aca-005009	Anolis carolinensis	33.61	1.00e-34	138.00
IUUC-Aly-005815	Arabidopsis lyrata	64.50	2.00e-66	244.00
IUUC-Ath-006765	Arabidopsis thaliana	66.23	1.00e-67	248.00
IUUC-Acl-008091	Aspergillus clavatus	39.64	1.00e-17	84.30
IUUC-Ate-010297	Aspergillus terreus	55.56	5.00e-17	82.00
IUUC-Ame-011133	Astyanax mexicanus	33.47	4.00e-36	143.00
IUUC-Bta-012590	Bos taurus	35.54	1.00e-34	138.00
IUUC-Bdi-014504	Brachypodium distachyon	53.36	1.00e-70	258.00
IUUC-Bol-015245	Brassica oleracea	63.68	5.00e-69	253.00
IUUC-Bra-017027	Brassica rapa	63.25	1.00e-68	251.00
IUUC-Cja-019518	Callithrix jacchus	35.32	2.00e-37	147.00
IUUC-Cfa-020620	Canis familiaris	36.10	3.00e-37	147.00
IUUC-Cpo-022085	Cavia porcellus	34.18	8.00e-35	139.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	39.66	3.00e-28	117.00
IUUC-Csa-023421	Chlorocebus sabaeus	35.02	2.00e-35	141.00
IUUC-Cho-025039	Choloepus hoffmanni	66.67	1.00e-25	109.00
IUUC-Cin-025479	Ciona intestinalis	40.09	1.00e-39	155.00
IUUC-Csv-026288	Ciona savignyi	30.62	2.00e-24	105.00
IUUC-Cne-027005	Cryptococcus neoformans	47.17	3.00e-12	65.50
IUUC-Dre-027430	Danio rerio	36.32	1.00e-38	152.00
IUUC-Dno-029766	Dasypus novemcinctus	31.97	1.00e-33	135.00
IUUC-Dor-030910	Dipodomys ordii	66.67	2.00e-26	111.00
IUUC-Dme-032200	Drosophila melanogaster	65.08	1.00e-26	112.00
IUUC-Ete-032510	Echinops telfairi	68.25	1.00e-25	110.00
IUUC-Eca-033493	Equus caballus	37.45	5.00e-37	146.00
IUUC-Eeu-034948	Erinaceus europaeus	31.54	4.00e-31	127.00
IUUC-Fca-035635	Felis catus	67.19	4.00e-27	114.00
IUUC-Fal-036998	Ficedula albicollis	35.66	7.00e-38	149.00
IUUC-Fox-037925	Fusarium oxysporum	60.00	6.00e-16	77.80
IUUC-Gmo-039035	Gadus morhua	33.33	2.00e-34	138.00
IUUC-Gga-040578	Gallus gallus	35.54	7.00e-37	145.00
IUUC-Gac-042172	Gasterosteus aculeatus	34.43	4.00e-38	150.00
IUUC-Gma-044339	Glycine max	70.69	3.00e-89	320.00
IUUC-Ggo-045559	Gorilla gorilla	31.97	2.00e-33	134.00
IUUC-Hsa-045965	Homo sapiens	35.02	2.00e-35	141.00
IUUC-Hvu-047046	Hordeum vulgare	50.20	6.00e-66	242.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	32.79	9.00e-36	142.00
IUUC-Kpa-049229	Komagataella pastoris	52.08	4.00e-14	70.50
IUUC-Lch-049419	Latimeria chalumnae	61.43	3.00e-26	112.00
IUUC-Lpe-050822	Leersia perrieri	55.65	2.00e-71	261.00
IUUC-Loc-052725	Lepisosteus oculatus	35.59	5.00e-35	139.00
IUUC-Lma-053234	Leptosphaeria maculans	53.57	6.00e-15	75.50
IUUC-Laf-054057	Loxodonta africana	31.97	1.00e-33	135.00
IUUC-Mcc-055455	Macaca mulatta	34.04	3.00e-35	140.00
IUUC-Meu-056848	Macropus eugenii	68.25	1.00e-25	110.00
IUUC-Mtr-058089	Medicago truncatula	70.71	4.00e-82	296.00
IUUC-Mga-059312	Meleagris gallopavo	38.95	1.00e-32	131.00
IUUC-Mmr-061351	Microcebus murinus	34.75	2.00e-34	138.00
IUUC-Mdo-062282	Monodelphis domestica	35.92	3.00e-35	140.00
IUUC-Mmu-063201	Mus musculus	36.82	4.00e-35	140.00
IUUC-Mac-064625	Musa acuminata	65.67	6.00e-84	302.00
IUUC-Mpu-066302	Mustela putorius furo	35.02	4.00e-35	140.00
IUUC-Mlu-068192	Myotis lucifugus	34.18	2.00e-34	138.00
IUUC-Nle-069062	Nomascus leucogenys	31.97	2.00e-33	134.00
IUUC-Opr-070207	Ochotona princeps	33.87	2.00e-34	137.00
IUUC-Ont-072446	Oreochromis niloticus	33.61	1.00e-35	142.00
IUUC-Oan-073652	Ornithorhynchus anatinus	35.83	9.00e-37	145.00
IUUC-Ocu-073871	Oryctolagus cuniculus	34.03	5.00e-33	133.00
IUUC-Obr-076266	Oryza brachyantha	55.65	2.00e-71	261.00
IUUC-Ogl-077118	Oryza glaberrima	64.29	1.00e-38	152.00
IUUC-Oin-079049	Oryza indica	64.29	1.00e-38	152.00
IUUC-Ome-081291	Oryza meridionalis	64.29	1.00e-38	152.00
IUUC-Oni-082218	Oryza nivara	64.29	1.00e-38	152.00
IUUC-Opu-084171	Oryza punctata	64.29	5.00e-39	153.00
IUUC-Osa-085563	Oryza sativa	64.29	1.00e-38	152.00
IUUC-Ola-087103	Oryzias latipes	34.27	3.00e-33	134.00
IUUC-Olu-087851	Ostreococcus lucimarinus	31.82	8.00e-18	82.80
IUUC-Oga-088066	Otolemur garnettii	40.00	9.00e-31	125.00
IUUC-Oar-089524	Ovis aries	32.92	5.00e-35	140.00
IUUC-Ptr-091665	Pan troglodytes	35.02	2.00e-35	141.00
IUUC-Pan-091875	Papio anubis	35.02	2.00e-35	141.00
IUUC-Psi-093904	Pelodiscus sinensis	40.46	5.00e-34	136.00
IUUC-Pma-094144	Petromyzon marinus	69.84	6.00e-25	105.00
IUUC-Pfo-096617	Poecilia formosa	35.25	8.00e-37	145.00
IUUC-Pab-097549	Pongo abelii	68.25	5.00e-26	110.00
IUUC-Pop-099415	Populus trichocarpa	74.26	8.00e-82	295.00
IUUC-Pca-100600	Procavia capensis	66.67	1.00e-26	112.00
IUUC-Ppe-101441	Prunus persica	74.36	3.00e-93	333.00
IUUC-Pva-102282	Pteropus vampyrus	33.61	8.00e-35	139.00
IUUC-Pte-104284	Pyrenophora teres	51.79	4.00e-15	75.90
IUUC-Pyt-104787	Pyrenophora triticirepentis	55.36	3.00e-15	76.60
IUUC-Rno-105646	Rattus norvegicus	35.98	5.00e-35	140.00
IUUC-Sha-107031	Sarcophilus harrisii	34.60	2.00e-36	144.00
IUUC-Smo-109441	Selaginella moellendorffii	45.54	7.00e-52	195.00
IUUC-Sit-109827	Setaria italica	58.05	4.00e-73	266.00
IUUC-Sly-111750	Solanum lycopersicum	71.43	2.00e-84	304.00
IUUC-Stu-112250	Solanum tuberosum	71.43	2.00e-84	304.00
IUUC-Sar-113193	Sorex araneus	68.25	6.00e-26	110.00
IUUC-Sbi-114826	Sorghum bicolor	55.51	5.00e-74	269.00
IUUC-Sre-115124	Sporisorium reilianum	61.82	7.00e-21	95.10
IUUC-Ssc-115797	Sus scrofa	32.11	3.00e-34	137.00
IUUC-Tgu-116837	Taeniopygia guttata	35.66	1.00e-37	148.00
IUUC-Tru-117974	Takifugu rubripes	34.85	2.00e-32	131.00
IUUC-Tsy-119035	Tarsius syrichta	65.15	1.00e-25	110.00
IUUC-Tni-119775	Tetraodon nigroviridis	35.44	6.00e-33	133.00
IUUC-Tca-121597	Theobroma cacao	76.89	2.00e-88	317.00
IUUC-Tvi-122341	Trichoderma virens	53.57	2.00e-13	67.00
IUUC-Tae-123043	Triticum aestivum	52.96	3.00e-72	264.00
IUUC-Tbe-127558	Tupaia belangeri	32.10	7.00e-34	136.00
IUUC-Ttr-128512	Tursiops truncatus	68.25	5.00e-26	110.00
IUUC-Uma-129581	Ustilago maydis	61.82	2.00e-21	97.10
IUUC-Vpa-130063	Vicugna pacos	62.07	1.00e-22	99.00
IUUC-Xtr-132189	Xenopus tropicalis	36.82	1.00e-37	148.00
IUUC-Xma-133297	Xiphophorus maculatus	32.41	5.00e-34	136.00
IUUC-Yli-134326	Yarrowia lipolytica	54.84	2.00e-17	82.00
IUUC-Zma-135298	Zea mays	53.31	7.00e-66	242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence