iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117208

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01005312

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000011269.1	ENSTGUT00000011747.1	ENSTGUP00000011621.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-09	35.9	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTVASGGRFRCPSCR 82
           *************************744445557779999888889**********8 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MSTSLSYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQASNP 60
YLPTRGGTTV ASGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESTRPERKCD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACCT CCCTGAGCTA CAAGTCTTTC TCCAAAGAGC AGCAAACTAT GGATAACCTG 60
GAGAAACAGC TGATCTGCCC CATCTGTTTG GAGATGTTCA CCAAGCCTGT GGTCATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	88.92	4.00e-180	624.00
IUUC-Apl-003341	Anas platyrhynchos	80.84	0.00e+00	725.00
IUUC-Aca-005384	Anolis carolinensis	70.92	0.00e+00	634.00
IUUC-Ame-010720	Astyanax mexicanus	73.55	8.00e-139	486.00
IUUC-Bta-013040	Bos taurus	88.92	1.00e-179	622.00
IUUC-Cja-019932	Callithrix jacchus	89.75	0.00e+00	627.00
IUUC-Cfa-020450	Canis familiaris	89.44	0.00e+00	630.00
IUUC-Cpo-021767	Cavia porcellus	68.19	0.00e+00	684.00
IUUC-Csa-023600	Chlorocebus sabaeus	68.77	0.00e+00	679.00
IUUC-Cho-024753	Choloepus hoffmanni	85.09	5.00e-167	580.00
IUUC-Cin-025224	Ciona intestinalis	50.67	8.00e-91	327.00
IUUC-Csv-026374	Ciona savignyi	51.77	1.00e-80	292.00
IUUC-Dre-028701	Danio rerio	71.61	7.00e-137	479.00
IUUC-Dno-030008	Dasypus novemcinctus	88.62	2.00e-179	621.00
IUUC-Ete-032274	Echinops telfairi	79.81	1.00e-158	552.00
IUUC-Eca-034326	Equus caballus	89.13	2.00e-180	624.00
IUUC-Fca-035385	Felis catus	88.58	1.00e-165	576.00
IUUC-Fal-036679	Ficedula albicollis	90.77	0.00e+00	785.00
IUUC-Gmo-039021	Gadus morhua	65.59	2.00e-120	424.00
IUUC-Gga-040576	Gallus gallus	98.10	0.00e+00	649.00
IUUC-Gac-042165	Gasterosteus aculeatus	68.91	2.00e-131	461.00
IUUC-Ggo-044496	Gorilla gorilla	89.44	0.00e+00	625.00
IUUC-Hsa-046337	Homo sapiens	89.13	2.00e-180	625.00
IUUC-Lch-050504	Latimeria chalumnae	65.61	6.00e-171	593.00
IUUC-Loc-052717	Lepisosteus oculatus	57.04	5.00e-162	563.00
IUUC-Laf-053838	Loxodonta africana	67.21	0.00e+00	676.00
IUUC-Mcc-054690	Macaca mulatta	88.20	2.00e-178	618.00
IUUC-Meu-056782	Macropus eugenii	63.73	1.00e-165	575.00
IUUC-Mga-060112	Meleagris gallopavo	97.48	0.00e+00	645.00
IUUC-Mmr-061229	Microcebus murinus	86.65	4.00e-175	607.00
IUUC-Mdo-062397	Monodelphis domestica	72.91	0.00e+00	671.00
IUUC-Mmu-063764	Mus musculus	69.95	0.00e+00	686.00
IUUC-Mpu-066503	Mustela putorius furo	70.32	0.00e+00	688.00
IUUC-Nle-069170	Nomascus leucogenys	89.13	2.00e-180	624.00
IUUC-Ont-072082	Oreochromis niloticus	67.42	3.00e-130	457.00
IUUC-Oan-072715	Ornithorhynchus anatinus	67.72	0.00e+00	645.00
IUUC-Ocu-074747	Oryctolagus cuniculus	90.06	0.00e+00	629.00
IUUC-Ola-086646	Oryzias latipes	63.47	1.00e-125	442.00
IUUC-Oga-087995	Otolemur garnettii	87.96	5.00e-178	617.00
IUUC-Oar-089844	Ovis aries	88.92	6.00e-180	623.00
IUUC-Ptr-091556	Pan troglodytes	89.44	0.00e+00	626.00
IUUC-Pan-092224	Papio anubis	88.82	8.00e-180	622.00
IUUC-Psi-093856	Pelodiscus sinensis	75.93	0.00e+00	756.00
IUUC-Pma-094534	Petromyzon marinus	53.61	3.00e-99	354.00
IUUC-Pfo-096596	Poecilia formosa	63.14	2.00e-128	451.00
IUUC-Pca-100510	Procavia capensis	68.14	0.00e+00	681.00
IUUC-Pva-102962	Pteropus vampyrus	88.20	2.00e-165	575.00
IUUC-Ptt-103920	Puccinia triticina	30.12	8.00e-06	43.50
IUUC-Rno-105696	Rattus norvegicus	69.76	0.00e+00	673.00
IUUC-Sha-106825	Sarcophilus harrisii	90.37	2.00e-172	598.00
IUUC-Ssc-116332	Sus scrofa	89.75	0.00e+00	628.00
IUUC-Tru-118744	Takifugu rubripes	68.67	2.00e-131	461.00
IUUC-Tsy-119352	Tarsius syrichta	89.44	1.00e-180	625.00
IUUC-Tni-120413	Tetraodon nigroviridis	68.93	4.00e-129	453.00
IUUC-Tbe-127821	Tupaia belangeri	92.54	2.00e-116	412.00
IUUC-Vpa-130699	Vicugna pacos	89.13	0.00e+00	627.00
IUUC-Xtr-132207	Xenopus tropicalis	84.21	1.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence