iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114665

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G063900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g003340	Sb02g003340.1	Sb02g003340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-11	44.4	111	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ + dg  ++vlp CgH+fh+dC+  w       +k+ +CP+Cr
   Q: 111  CPVCLDGYGDGdvVRVLPdCGHLFHRDCVDPW------LRKRPTCPVCR 153
           ********6665599999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MNSPPGDGGG GSAHGIFGSS GISGFGYGIG VSIGILLVVT TIALAIYFCT RTSMPVVSAA 60
GAPALPRDVE QGGIDEATLE AFPAVSYAEA RMRRKGKAPA AAAQEEAFCC CPVCLDGYGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTCGC CGCCGGGCGA CGGCGGCGGC GGGAGCGCGC ACGGCATATT CGGGTCTAGC 60
GGCATCAGCG GGTTCGGGTA CGGCATCGGC GTGTCCATCG GCATCCTCCT CGTGGTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g005810

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002979	Amborella trichopoda	40.16	9.00e-22	94.70
IUUC-Bdi-015027	Brachypodium distachyon	61.00	6.00e-29	119.00
IUUC-Bol-016119	Brassica oleracea	44.64	3.00e-26	110.00
IUUC-Bra-018069	Brassica rapa	41.22	2.00e-25	107.00
IUUC-Cpo-021302	Cavia porcellus	40.62	9.00e-14	69.70
IUUC-Cme-027122	Cyanidioschyzon merolae	65.31	6.00e-14	72.00
IUUC-Gmo-039603	Gadus morhua	44.30	3.00e-15	75.10
IUUC-Gma-043015	Glycine max	42.34	3.00e-22	97.10
IUUC-Lpe-050914	Leersia perrieri	65.77	3.00e-36	143.00
IUUC-Mga-059708	Meleagris gallopavo	42.71	2.00e-14	72.00
IUUC-Mdo-062435	Monodelphis domestica	40.62	7.00e-14	70.10
IUUC-Mac-064803	Musa acuminata	51.61	9.00e-38	150.00
IUUC-Mlu-067534	Myotis lucifugus	40.62	9.00e-14	69.70
IUUC-Ocu-074084	Oryctolagus cuniculus	40.62	1.00e-13	69.70
IUUC-Oba-075041	Oryza barthii	55.56	8.00e-22	94.70
IUUC-Obr-076328	Oryza brachyantha	55.56	5.00e-22	96.70
IUUC-Ogl-077205	Oryza glaberrima	67.88	1.00e-29	121.00
IUUC-Ogu-078903	Oryza glumaepatula	67.39	3.00e-32	130.00
IUUC-Oin-079322	Oryza indica	68.61	2.00e-32	130.00
IUUC-Ome-081376	Oryza meridionalis	67.88	1.00e-29	121.00
IUUC-Oni-082131	Oryza nivara	67.88	1.00e-29	121.00
IUUC-Opu-083948	Oryza punctata	65.54	1.00e-37	148.00
IUUC-Oru-084214	Oryza rufipogon	65.94	2.00e-31	127.00
IUUC-Osa-085714	Oryza sativa	65.94	2.00e-31	127.00
IUUC-Ola-086771	Oryzias latipes	43.75	6.00e-15	73.60
IUUC-Pan-091866	Papio anubis	40.62	4.00e-14	70.90
IUUC-Ppa-095719	Physcomitrella patens	34.46	3.00e-22	97.10
IUUC-Ppe-101919	Prunus persica	47.10	2.00e-25	107.00
IUUC-Sha-106655	Sarcophilus harrisii	40.62	7.00e-14	70.10
IUUC-Sly-111057	Solanum lycopersicum	51.43	6.00e-21	92.80
IUUC-Stu-112013	Solanum tuberosum	46.34	1.00e-27	115.00
IUUC-Sar-113043	Sorex araneus	40.62	4.00e-14	71.20
IUUC-Ssc-116062	Sus scrofa	40.62	7.00e-14	70.10
IUUC-Tgu-117497	Taeniopygia guttata	41.67	5.00e-14	71.20
IUUC-Tsy-119460	Tarsius syrichta	35.11	9.00e-16	76.30
IUUC-Tca-121855	Theobroma cacao	43.67	3.00e-35	139.00
IUUC-Tae-125155	Triticum aestivum	64.94	5.00e-37	145.00
IUUC-Tur-125993	Triticum urartu	64.38	2.00e-35	142.00
IUUC-Tbe-127574	Tupaia belangeri	40.62	1.00e-13	69.70
IUUC-Ttr-128435	Tursiops truncatus	40.62	6.00e-14	71.20
IUUC-Vpa-130737	Vicugna pacos	40.62	6.00e-14	70.50
IUUC-Vvi-131605	Vitis vinifera	33.33	2.00e-17	82.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence