iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050073

Ensembl Protein ID

ENSLACP00000000475.1

UniProt Accession

H2ZSV4; H2ZSV4_LATCH

Genbank Protein ID

ENSLACP00000000475

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01181373

Gene Name

RNF139

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000000423.1	ENSLACT00000000477.1	ENSLACP00000000475.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-08	34.3	547	585

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC+++f +  +++pC H fha Cl kw       + +++CP C
   Q: 547  CAICYQEFTTSARITPCHHYFHALCLRKW------LYIQDTCPMC 585
           ********999******************......********** PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

ASSMASPRAR IAQHARAVLD VALRVPCIFL IDAIFNSSHD PSSGWLSTTS QIGLRLLGVL 60
VSTVVLVLSQ RALFKFYIFS FAFLIVASST LVNYHATLHI DFHSVYYTAA FGTEFLPRNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTCCTCCA TGGCGTCTCC TCGAGCCCGA ATCGCTCAGC ATGCTCGGGC TGTGTTGGAT 60
GTGGCCCTGA GGGTTCCCTG CATCTTCCTC ATTGACGCCA TCTTTAACTC GTCGCACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025754--TRC8_N_dom
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13705--TRC8_N
PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002401	Ailuropoda melanoleuca	73.98	0.00e+00	952.00
IUUC-Apl-004214	Anas platyrhynchos	80.33	0.00e+00	900.00
IUUC-Aca-005326	Anolis carolinensis	75.66	0.00e+00	926.00
IUUC-Ame-011687	Astyanax mexicanus	71.47	0.00e+00	926.00
IUUC-Bta-013394	Bos taurus	72.94	0.00e+00	976.00
IUUC-Cja-019499	Callithrix jacchus	73.39	0.00e+00	985.00
IUUC-Cfa-020357	Canis familiaris	73.24	0.00e+00	956.00
IUUC-Cpo-021924	Cavia porcellus	76.29	0.00e+00	956.00
IUUC-Csa-023513	Chlorocebus sabaeus	72.94	0.00e+00	971.00
IUUC-Cho-024285	Choloepus hoffmanni	67.56	0.00e+00	841.00
IUUC-Cin-025223	Ciona intestinalis	52.21	7.00e-74	270.00
IUUC-Csv-026018	Ciona savignyi	47.95	2.00e-66	245.00
IUUC-Dre-028660	Danio rerio	71.45	0.00e+00	845.00
IUUC-Dno-029463	Dasypus novemcinctus	76.83	5.00e-114	404.00
IUUC-Dor-030728	Dipodomys ordii	75.58	0.00e+00	925.00
IUUC-Dme-032186	Drosophila melanogaster	44.69	5.00e-99	355.00
IUUC-Ete-032368	Echinops telfairi	71.32	0.00e+00	939.00
IUUC-Eca-034325	Equus caballus	74.81	0.00e+00	953.00
IUUC-Fca-035537	Felis catus	75.08	0.00e+00	944.00
IUUC-Fal-037459	Ficedula albicollis	80.34	0.00e+00	889.00
IUUC-Gmo-039442	Gadus morhua	79.48	5.00e-98	351.00
IUUC-Gga-041071	Gallus gallus	77.39	0.00e+00	922.00
IUUC-Gac-042483	Gasterosteus aculeatus	72.77	0.00e+00	982.00
IUUC-Ggo-044672	Gorilla gorilla	72.94	0.00e+00	968.00
IUUC-Hsa-045836	Homo sapiens	72.65	0.00e+00	956.00
IUUC-Itr-048588	Ictidomys tridecemlineatus	75.34	0.00e+00	986.00
IUUC-Loc-052908	Lepisosteus oculatus	77.81	0.00e+00	1036.00
IUUC-Laf-053519	Loxodonta africana	72.65	0.00e+00	980.00
IUUC-Mga-059922	Meleagris gallopavo	80.26	0.00e+00	890.00
IUUC-Mmr-061452	Microcebus murinus	71.75	0.00e+00	950.00
IUUC-Mdo-062412	Monodelphis domestica	74.07	0.00e+00	977.00
IUUC-Mmu-063147	Mus musculus	74.35	0.00e+00	976.00
IUUC-Mpu-065929	Mustela putorius furo	73.09	0.00e+00	956.00
IUUC-Mlu-067899	Myotis lucifugus	71.15	0.00e+00	942.00
IUUC-Nle-070083	Nomascus leucogenys	72.94	0.00e+00	970.00
IUUC-Opr-070461	Ochotona princeps	72.17	0.00e+00	971.00
IUUC-Ont-072256	Oreochromis niloticus	69.57	0.00e+00	965.00
IUUC-Oan-073150	Ornithorhynchus anatinus	76.29	0.00e+00	880.00
IUUC-Ocu-073748	Oryctolagus cuniculus	74.10	0.00e+00	936.00
IUUC-Oga-088565	Otolemur garnettii	73.94	0.00e+00	975.00
IUUC-Oar-089432	Ovis aries	76.63	0.00e+00	959.00
IUUC-Ptr-091422	Pan troglodytes	72.80	0.00e+00	969.00
IUUC-Pan-092331	Papio anubis	72.80	0.00e+00	969.00
IUUC-Psi-092933	Pelodiscus sinensis	79.93	0.00e+00	902.00
IUUC-Pfo-097466	Poecilia formosa	69.44	0.00e+00	958.00
IUUC-Pab-098702	Pongo abelii	72.94	0.00e+00	967.00
IUUC-Pca-100125	Procavia capensis	73.14	0.00e+00	966.00
IUUC-Pva-102628	Pteropus vampyrus	72.26	0.00e+00	952.00
IUUC-Rno-104886	Rattus norvegicus	73.82	0.00e+00	979.00
IUUC-Sce-106223	Saccharomyces cerevisiae	35.94	1.00e-07	48.90
IUUC-Sha-106702	Sarcophilus harrisii	74.10	0.00e+00	975.00
IUUC-Ssc-116164	Sus scrofa	73.24	0.00e+00	975.00
IUUC-Tgu-116829	Taeniopygia guttata	78.36	0.00e+00	913.00
IUUC-Tru-118557	Takifugu rubripes	71.64	0.00e+00	943.00
IUUC-Tsy-119399	Tarsius syrichta	75.74	2.00e-164	571.00
IUUC-Tni-120006	Tetraodon nigroviridis	64.02	0.00e+00	803.00
IUUC-Tbe-127664	Tupaia belangeri	72.52	0.00e+00	947.00
IUUC-Ttr-129144	Tursiops truncatus	73.16	0.00e+00	984.00
IUUC-Vpa-130226	Vicugna pacos	72.50	0.00e+00	967.00
IUUC-Xtr-132461	Xenopus tropicalis	72.07	0.00e+00	909.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence