iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019759

UUCD1 version

UUC-CaJ-00567

Ensembl Protein ID

ENSCJAP00000020189.1

UniProt Accession

F7GAP3; F7GAP3_CALJA

Genbank Protein ID

JAB03326.1; JAB35675.1; JAB49776.1

Protein Name

Tripartite motif-containing protein 38

Genbank Nucleotide ID

ACFV01126677; GAMQ01006176; GAMP01002979

Gene Name

TRIM38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000010938.3	ENSCJAT00000021330.1	ENSCJAP00000020189.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.90e-08	33.9	11	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPnltlrrliqa 67
            ee  C+I l lM++Pv + +G++y + +I  ++++  +         cP +r+p++ +++ Pn+ l +li+a
   Q: 11   MEEATCSICLSLMTNPVSVNCGHSYCQLCIMDFFKNPSQkqlrqkmlWCPQCRAPFHLDSVRPNKQLGNLIEA 83
           67889*****************************5555557889999***********************987 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MASTTSTKRM MEEATCSICL SLMTNPVSVN CGHSYCQLCI MDFFKNPSQK QLRQKMLWCP 60
QCRAPFHLDS VRPNKQLGNL IEALKEMDHE MSCEEHREQL HLFCEDEGRL ICWRCERAPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGACTTCC TGACCCAGGC CTCAGGAAGT GGCAGCTGCG GAGGGGACTA GCAGCAAATA 60
TGTAAGTGTC TGAGCAGTGT ACGTTACGGA AAAGGTCCAG ACCAAGGTTT TCTCAGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0004871--F:signal transducer activity
GO:0008270--F:zinc ion binding
GO:0050687--P:negative regulation of defense response to virus
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0046598--P:positive regulation of viral entry into host cell
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070936--P:protein K48-linked ubiquitination
GO:0032648--P:regulation of interferon-beta production

KEGG

cjc:100390837

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001649	Ailuropoda melanoleuca	73.49	0.00e+00	716.00
IUUC-Ago-007781	Ashbya gossypii	31.73	1.00e-08	54.30
IUUC-Bta-012574	Bos taurus	75.43	0.00e+00	714.00
IUUC-Cfa-020431	Canis familiaris	71.40	0.00e+00	676.00
IUUC-Cpo-022541	Cavia porcellus	65.59	0.00e+00	629.00
IUUC-Csa-023320	Chlorocebus sabaeus	87.96	0.00e+00	846.00
IUUC-Cho-024964	Choloepus hoffmanni	70.73	9.00e-128	449.00
IUUC-Dno-029741	Dasypus novemcinctus	65.81	1.00e-175	609.00
IUUC-Dor-030298	Dipodomys ordii	61.36	3.00e-102	364.00
IUUC-Ete-032493	Echinops telfairi	64.64	1.00e-172	599.00
IUUC-Eca-033962	Equus caballus	76.79	0.00e+00	706.00
IUUC-Eeu-035228	Erinaceus europaeus	70.15	5.00e-130	457.00
IUUC-Fca-036349	Felis catus	72.84	0.00e+00	702.00
IUUC-Ggo-044493	Gorilla gorilla	89.25	0.00e+00	860.00
IUUC-Hsa-046161	Homo sapiens	88.82	0.00e+00	858.00
IUUC-Itr-048162	Ictidomys tridecemlineatus	61.85	1.00e-148	519.00
IUUC-Laf-054150	Loxodonta africana	73.98	0.00e+00	691.00
IUUC-Mcc-055076	Macaca mulatta	87.74	0.00e+00	844.00
IUUC-Mmu-063517	Mus musculus	55.84	4.00e-147	514.00
IUUC-Mpu-065752	Mustela putorius furo	72.41	0.00e+00	704.00
IUUC-Mlu-067758	Myotis lucifugus	59.50	9.00e-151	527.00
IUUC-Nle-069117	Nomascus leucogenys	88.82	0.00e+00	853.00
IUUC-Opr-071144	Ochotona princeps	69.05	0.00e+00	631.00
IUUC-Ocu-074825	Oryctolagus cuniculus	70.78	0.00e+00	670.00
IUUC-Oga-088744	Otolemur garnettii	73.22	2.00e-126	444.00
IUUC-Oar-089951	Ovis aries	75.65	0.00e+00	717.00
IUUC-Ptr-090519	Pan troglodytes	89.03	0.00e+00	863.00
IUUC-Pan-092059	Papio anubis	87.53	0.00e+00	845.00
IUUC-Pab-098747	Pongo abelii	89.89	0.00e+00	866.00
IUUC-Pca-100294	Procavia capensis	67.96	0.00e+00	652.00
IUUC-Pva-102129	Pteropus vampyrus	65.38	0.00e+00	632.00
IUUC-Sar-113760	Sorex araneus	63.23	2.00e-159	555.00
IUUC-Tsy-119422	Tarsius syrichta	75.91	0.00e+00	697.00
IUUC-Tbe-127628	Tupaia belangeri	61.46	2.00e-97	348.00
IUUC-Ttr-129039	Tursiops truncatus	76.13	0.00e+00	723.00
IUUC-Vpa-130188	Vicugna pacos	80.07	1.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence