iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080682

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538710.1_FG089	KN538710.1_FGT089	KN538710.1_FGP089

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	6.30e-06	26.9	21	75

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 85   apapaptptpeegpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkal 142
           +p+p      +   +a    +lp++i+ eil ll++++l+r++ vcr+w    s++++
   Q: 21   TPSPRA---WKRRKHAAPAANLPDDIISEILLLLPARSLIRFRAVCRSWDARLSSPSF 75
           333322...234556777899*****************************55554665 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MSLETARPGE SKRRNTDAVD TPSPRAWKRR KHAAPAANLP DDIISEILLL LPARSLIRFR 60
AVCRSWDARL SSPSFAEAYA ANAAAHRMTN YKFVFFAPSP NRSTAAYSCT RRTVAVDRLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCACTCG AAACCGCAAG ACCAGGGGAA TCGAAGCGAA GGAACACCGA TGCAGTTGAC 60
ACCCCAAGCC CAAGGGCGTG GAAGCGAAGG AAGCACGCCG CCCCCGCGGC CAATCTGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000304	Aegilops tauschii	57.81	0.00e+00	956.00
IUUC-Aca-005249	Anolis carolinensis	42.55	5.00e-04	37.40
IUUC-Aly-006360	Arabidopsis lyrata	23.61	1.00e-08	53.50
IUUC-Bdi-014683	Brachypodium distachyon	60.53	0.00e+00	1093.00
IUUC-Bol-016117	Brassica oleracea	24.45	8.00e-08	50.40
IUUC-Bra-017514	Brassica rapa	24.00	1.00e-12	66.60
IUUC-Mdo-062763	Monodelphis domestica	39.02	2.50e-02	33.50
IUUC-Mac-064570	Musa acuminata	29.13	2.00e-06	45.80
IUUC-Pma-094663	Petromyzon marinus	30.08	1.10e-01	32.30
IUUC-Sha-107184	Sarcophilus harrisii	39.02	2.20e-02	33.50
IUUC-Sit-109947	Setaria italica	51.76	0.00e+00	861.00
IUUC-Tae-123694	Triticum aestivum	57.71	0.00e+00	956.00
IUUC-Tur-126635	Triticum urartu	57.89	0.00e+00	987.00
IUUC-Vda-129824	Verticillium dahliae	36.36	1.20e+00	26.90
IUUC-Vpa-130065	Vicugna pacos	39.29	1.00e-02	33.90
IUUC-Xtr-132515	Xenopus tropicalis	48.28	4.00e-03	33.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence