iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091225

UUCD1 version

UUC-PaT-00459

Ensembl Protein ID

ENSPTRP00000022650.4

UniProt Accession

H2QJW6; H2QJW6_PANTR

Genbank Protein ID

JAA01293.1; JAA22139.1; JAA26387.1; JAA34113.1

Protein Name

Ring finger protein 24

Genbank Nucleotide ID

AACZ03122064; GABF01000006; GABD01006713; GABE01010626

Gene Name

RNF24

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000013212.4	ENSPTRT00000024554.4	ENSPTRP00000022650.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-08	32.9	99	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cledf  +d++ + pC+H+fh++Cl kw         +  CPlC+
   Q: 99   CAVCLEDFkpRDELGICPCKHAFHRKCLIKW------LEVRKVCPLCN 140
           ********885558899**************......999*******7 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MLNKSGESRY PALFPVLGGS SMSSDFPHYN FRMPNIGFQN LPLNIYIVVF GTAIFVFILS 60
LLFCCYLIRL RHQAHKEFYA YKQVILKEKV KELNLHELCA VCLEDFKPRD ELGICPCKHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGAATA AGAGTGGTGA GAGCAGATAT CCTGCCTTGT TCCCGGTCTT AGGGGGGTAA 60
GTATTCAGTC TTTCACAATT AAGAATAATA TTAGCTGTAC AGTTTTTGTT GTTATTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ptr:747293

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000179	Aegilops tauschii	52.73	1.00e-13	67.00
IUUC-Aml-001325	Ailuropoda melanoleuca	96.23	2.00e-86	310.00
IUUC-Apl-003423	Anas platyrhynchos	95.35	5.00e-70	256.00
IUUC-Aly-005601	Arabidopsis lyrata	43.10	4.00e-12	64.70
IUUC-Ath-007601	Arabidopsis thaliana	43.33	2.00e-12	66.60
IUUC-Ame-010971	Astyanax mexicanus	90.29	5.00e-52	195.00
IUUC-Bta-012688	Bos taurus	99.32	5.00e-84	302.00
IUUC-Cja-019693	Callithrix jacchus	100.00	3.00e-86	309.00
IUUC-Cfa-020659	Canis familiaris	100.00	5.00e-85	305.00
IUUC-Cpo-021977	Cavia porcellus	99.32	3.00e-84	303.00
IUUC-Csa-023052	Chlorocebus sabaeus	100.00	5.00e-85	305.00
IUUC-Cho-024589	Choloepus hoffmanni	98.51	4.00e-75	272.00
IUUC-Cin-025407	Ciona intestinalis	45.37	9.00e-24	102.00
IUUC-Csv-026249	Ciona savignyi	46.30	2.00e-24	104.00
IUUC-Dre-027784	Danio rerio	82.80	2.00e-71	261.00
IUUC-Dno-029622	Dasypus novemcinctus	88.62	8.00e-87	311.00
IUUC-Dor-030780	Dipodomys ordii	99.32	2.00e-84	303.00
IUUC-Ete-032257	Echinops telfairi	97.30	1.00e-79	287.00
IUUC-Eca-033551	Equus caballus	100.00	5.00e-85	305.00
IUUC-Eeu-034897	Erinaceus europaeus	98.65	7.00e-83	298.00
IUUC-Fca-035708	Felis catus	100.00	3.00e-86	309.00
IUUC-Fal-036814	Ficedula albicollis	88.39	2.00e-70	258.00
IUUC-Gmo-038553	Gadus morhua	84.46	3.00e-66	243.00
IUUC-Gga-040496	Gallus gallus	95.27	1.00e-74	271.00
IUUC-Gac-042434	Gasterosteus aculeatus	87.25	4.00e-72	263.00
IUUC-Ggo-044530	Gorilla gorilla	100.00	1.00e-97	348.00
IUUC-Hsa-046588	Homo sapiens	100.00	1.00e-97	348.00
IUUC-Itr-048721	Ictidomys tridecemlineatus	98.65	9.00e-84	301.00
IUUC-Lch-049966	Latimeria chalumnae	88.82	1.00e-76	277.00
IUUC-Loc-052245	Lepisosteus oculatus	86.00	4.00e-73	266.00
IUUC-Laf-053477	Loxodonta africana	100.00	5.00e-85	305.00
IUUC-Mcc-055700	Macaca mulatta	94.67	2.00e-88	317.00
IUUC-Meu-056179	Macropus eugenii	86.49	5.00e-71	259.00
IUUC-Mga-059784	Meleagris gallopavo	78.00	2.00e-62	230.00
IUUC-Mmr-060797	Microcebus murinus	97.04	9.00e-94	335.00
IUUC-Mdo-062152	Monodelphis domestica	96.62	2.00e-82	297.00
IUUC-Mmu-063431	Mus musculus	97.97	6.00e-84	301.00
IUUC-Mpu-066435	Mustela putorius furo	93.25	2.00e-86	310.00
IUUC-Mlu-067711	Myotis lucifugus	100.00	5.00e-85	305.00
IUUC-Nle-069294	Nomascus leucogenys	100.00	5.00e-85	305.00
IUUC-Opr-070557	Ochotona princeps	100.00	5.00e-85	305.00
IUUC-Ont-071797	Oreochromis niloticus	86.09	1.00e-71	261.00
IUUC-Ocu-074412	Oryctolagus cuniculus	98.68	4.00e-86	309.00
IUUC-Ola-087239	Oryzias latipes	86.58	4.00e-69	253.00
IUUC-Oga-088923	Otolemur garnettii	97.63	3.00e-95	340.00
IUUC-Oar-090126	Ovis aries	98.05	6.00e-87	312.00
IUUC-Pan-092018	Papio anubis	99.34	2.00e-86	310.00
IUUC-Pma-094208	Petromyzon marinus	47.71	1.00e-24	104.00
IUUC-Pfo-097399	Poecilia formosa	86.18	2.00e-72	264.00
IUUC-Pab-098071	Pongo abelii	100.00	5.00e-85	305.00
IUUC-Pca-100136	Procavia capensis	89.86	7.00e-75	271.00
IUUC-Pva-102139	Pteropus vampyrus	100.00	1.00e-69	254.00
IUUC-Sha-107160	Sarcophilus harrisii	96.08	6.00e-85	305.00
IUUC-Sar-113430	Sorex araneus	95.95	5.00e-81	292.00
IUUC-Tgu-117344	Taeniopygia guttata	94.17	9.00e-55	204.00
IUUC-Tru-117961	Takifugu rubripes	94.49	1.00e-68	251.00
IUUC-Tsy-118956	Tarsius syrichta	72.30	4.00e-55	206.00
IUUC-Tni-120481	Tetraodon nigroviridis	93.70	5.00e-68	249.00
IUUC-Tbe-127610	Tupaia belangeri	85.29	8.00e-46	174.00
IUUC-Ttr-128794	Tursiops truncatus	100.00	5.00e-85	305.00
IUUC-Vpa-130388	Vicugna pacos	99.02	3.00e-56	209.00
IUUC-Xtr-132561	Xenopus tropicalis	90.54	9.00e-77	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence