iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016724

Ensembl Protein ID

Bra027574.1-P

UniProt Accession

M4EFL2; M4EFL2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027574	Bra027574.1	Bra027574.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-08	35.2	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +C+ gg+    l++C+ C + +H +Cl ++  +  pn + wiCpkC+
   Q: 115  CVICDLGGD----LLCCDSCPRTYHTDCLTPP-LKRIPNGK-WICPKCS 157
           *********....*******************.*******7.******7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTDSGSEMLD RDWVMKQKRR KLPSILDSLD QKEDSSAAAI DSPDKPTKHQ LKAGPTPERT 60
SKRKGQSLPE NNSLAFGSPE HTSSDKLTNQ QPSVDLTPEG NSSKRKGHDG NYFECVICDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGATT CTGGCAGTGA AATGCTTGAT AGAGATTGGG TCATGAAGCA GAAACGAAGA 60
AAGCTTCCGT CTATTCTGGA TTCGTTAGAC CAAAAAGAGG ATTCTTCTGC GGCGGCTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009057--Homeobox-like
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	40.77	3.00e-141	496.00
IUUC-Apl-003406	Anas platyrhynchos	40.80	3.00e-140	493.00
IUUC-Aca-004560	Anolis carolinensis	41.11	5.00e-144	506.00
IUUC-Aly-005645	Arabidopsis lyrata	78.96	0.00e+00	3117.00
IUUC-Ath-007406	Arabidopsis thaliana	79.50	0.00e+00	3176.00
IUUC-Ame-011352	Astyanax mexicanus	41.23	2.00e-146	514.00
IUUC-Bta-012868	Bos taurus	41.34	3.00e-144	507.00
IUUC-Bol-016073	Brassica oleracea	94.95	0.00e+00	3945.00
IUUC-Cel-018108	Caenorhabditis elegans	40.03	1.00e-140	494.00
IUUC-Cja-019018	Callithrix jacchus	41.09	7.00e-143	502.00
IUUC-Cfa-021055	Canis familiaris	41.34	3.00e-144	506.00
IUUC-Cpo-022083	Cavia porcellus	40.09	9.00e-142	498.00
IUUC-Csa-023084	Chlorocebus sabaeus	40.94	2.00e-143	504.00
IUUC-Cho-024361	Choloepus hoffmanni	40.51	4.00e-119	423.00
IUUC-Csv-025847	Ciona savignyi	37.57	1.00e-134	475.00
IUUC-Dre-028226	Danio rerio	39.98	2.00e-143	503.00
IUUC-Dno-029656	Dasypus novemcinctus	39.59	1.00e-143	504.00
IUUC-Dor-030167	Dipodomys ordii	41.13	1.00e-143	504.00
IUUC-Dme-032150	Drosophila melanogaster	37.42	4.00e-138	486.00
IUUC-Ete-032757	Echinops telfairi	39.36	1.00e-119	425.00
IUUC-Eca-034372	Equus caballus	40.21	6.00e-142	499.00
IUUC-Eeu-034634	Erinaceus europaeus	42.69	2.00e-90	328.00
IUUC-Fca-036048	Felis catus	40.87	2.00e-141	498.00
IUUC-Fal-037282	Ficedula albicollis	41.22	4.00e-140	493.00
IUUC-Gmo-038957	Gadus morhua	42.45	2.00e-141	497.00
IUUC-Gga-040607	Gallus gallus	41.27	4.00e-143	502.00
IUUC-Gac-041375	Gasterosteus aculeatus	40.83	2.00e-149	524.00
IUUC-Gma-043999	Glycine max	45.35	2.00e-162	566.00
IUUC-Ggo-044514	Gorilla gorilla	41.05	1.00e-143	504.00
IUUC-Hsa-046181	Homo sapiens	41.05	1.00e-143	505.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	41.11	2.00e-143	504.00
IUUC-Lch-050343	Latimeria chalumnae	39.39	1.00e-147	518.00
IUUC-Loc-052383	Lepisosteus oculatus	39.68	9.00e-136	478.00
IUUC-Laf-053749	Loxodonta africana	40.94	7.00e-143	502.00
IUUC-Mcc-055856	Macaca mulatta	40.82	2.00e-143	504.00
IUUC-Meu-056292	Macropus eugenii	35.29	3.00e-48	187.00
IUUC-Mga-059630	Meleagris gallopavo	41.34	8.00e-144	505.00
IUUC-Mmr-060986	Microcebus murinus	41.16	4.00e-143	503.00
IUUC-Mdo-062971	Monodelphis domestica	40.56	5.00e-140	492.00
IUUC-Mmu-063644	Mus musculus	41.05	4.00e-143	503.00
IUUC-Mpu-065809	Mustela putorius furo	41.34	4.00e-144	506.00
IUUC-Mlu-067355	Myotis lucifugus	41.11	6.00e-144	505.00
IUUC-Nle-069824	Nomascus leucogenys	41.02	5.00e-144	506.00
IUUC-Opr-070960	Ochotona princeps	40.00	1.00e-135	478.00
IUUC-Ont-072235	Oreochromis niloticus	41.09	2.00e-148	521.00
IUUC-Oan-072885	Ornithorhynchus anatinus	41.20	3.00e-103	370.00
IUUC-Ocu-074438	Oryctolagus cuniculus	41.22	1.00e-143	505.00
IUUC-Ola-086880	Oryzias latipes	40.16	1.00e-142	501.00
IUUC-Oga-088775	Otolemur garnettii	40.71	5.00e-143	503.00
IUUC-Oar-089784	Ovis aries	41.34	3.00e-144	506.00
IUUC-Ptr-090586	Pan troglodytes	40.94	9.00e-143	501.00
IUUC-Pan-092282	Papio anubis	40.82	1.00e-143	504.00
IUUC-Psi-093007	Pelodiscus sinensis	40.85	5.00e-142	499.00
IUUC-Ppa-095491	Physcomitrella patens	59.33	0.00e+00	939.00
IUUC-Pfo-096265	Poecilia formosa	41.13	4.00e-153	536.00
IUUC-Pab-097677	Pongo abelii	41.05	2.00e-143	504.00
IUUC-Pca-100829	Procavia capensis	43.02	3.00e-137	483.00
IUUC-Pva-103186	Pteropus vampyrus	39.39	6.00e-142	499.00
IUUC-Rno-105378	Rattus norvegicus	40.82	1.00e-141	498.00
IUUC-Sha-107350	Sarcophilus harrisii	40.77	1.00e-142	501.00
IUUC-Smo-108946	Selaginella moellendorffii	64.00	0.00e+00	1023.00
IUUC-Sly-110976	Solanum lycopersicum	45.71	1.00e-157	550.00
IUUC-Ssc-116303	Sus scrofa	41.16	2.00e-142	501.00
IUUC-Tgu-116779	Taeniopygia guttata	40.95	4.00e-139	489.00
IUUC-Tru-118648	Takifugu rubripes	41.56	2.00e-154	541.00
IUUC-Tsy-119261	Tarsius syrichta	42.17	5.00e-120	426.00
IUUC-Tni-120039	Tetraodon nigroviridis	41.18	7.00e-149	522.00
IUUC-Tbe-128117	Tupaia belangeri	40.82	4.00e-83	303.00
IUUC-Ttr-128301	Tursiops truncatus	40.41	5.00e-138	486.00
IUUC-Vpa-130209	Vicugna pacos	45.25	4.00e-70	260.00
IUUC-Vvi-130849	Vitis vinifera	40.85	3.00e-158	553.00
IUUC-Xtr-132668	Xenopus tropicalis	39.75	7.00e-138	485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence