iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028675

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 13

Genbank Nucleotide ID

CU855930

Gene Name

trim13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000010010.9	ENSDART00000157265.1	ENSDARP00000129064.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-07	31.7	20	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw..pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +   +++   ++ f+CP+Cr
   Q: 20   CPICCCLFED-PRVLPCSHSFCKKCLEGIldGNRSPTWRPPFKCPTCR 66
           **********.***************88877666667788888****8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPTQLQHKDR MELLEEDLTC PICCCLFEDP RVLPCSHSFC KKCLEGILDG NRSPTWRPPF 60
KCPTCRKETV HNGIASLQVN YSLRGIVEKY NRIRVMPRMS QCRVHSGQPL NIFCATDLKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATGGGTAA TATCAGACAT TAAAAACACA AATCTAAAAG AGATTACTTT ACAGCGTTTT 60
CGACACATAA TTAAACATCC GATCAATTTT CTACCTGTGC TGTGCAGTAA GAGCTGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	47.70	1.00e-109	390.00
IUUC-Apl-004168	Anas platyrhynchos	51.23	6.00e-118	417.00
IUUC-Aca-004395	Anolis carolinensis	50.12	3.00e-113	402.00
IUUC-Ame-011325	Astyanax mexicanus	59.88	2.00e-83	302.00
IUUC-Bta-012613	Bos taurus	48.40	4.00e-110	391.00
IUUC-Cja-018856	Callithrix jacchus	49.15	4.00e-116	411.00
IUUC-Cfa-021019	Canis familiaris	48.55	5.00e-110	391.00
IUUC-Cpo-021845	Cavia porcellus	57.83	1.00e-108	386.00
IUUC-Csa-023380	Chlorocebus sabaeus	47.93	1.00e-109	389.00
IUUC-Cho-024733	Choloepus hoffmanni	73.74	6.00e-41	161.00
IUUC-Dno-030018	Dasypus novemcinctus	47.65	7.00e-113	400.00
IUUC-Dor-030599	Dipodomys ordii	39.25	6.00e-50	190.00
IUUC-Ete-033134	Echinops telfairi	48.16	6.00e-114	404.00
IUUC-Eca-033931	Equus caballus	48.91	3.00e-111	395.00
IUUC-Eeu-034903	Erinaceus europaeus	48.65	3.00e-112	398.00
IUUC-Fca-035642	Felis catus	56.55	6.00e-108	384.00
IUUC-Fal-037108	Ficedula albicollis	51.72	2.00e-121	429.00
IUUC-Gga-040903	Gallus gallus	51.00	2.00e-117	415.00
IUUC-Ggo-044635	Gorilla gorilla	47.70	2.00e-110	392.00
IUUC-Hsa-046345	Homo sapiens	47.70	1.00e-110	393.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	57.51	2.00e-109	389.00
IUUC-Lch-050599	Latimeria chalumnae	63.11	3.00e-116	411.00
IUUC-Loc-052378	Lepisosteus oculatus	69.72	2.00e-133	468.00
IUUC-Laf-053332	Loxodonta africana	47.57	8.00e-112	397.00
IUUC-Mcc-054705	Macaca mulatta	57.78	6.00e-110	390.00
IUUC-Meu-056825	Macropus eugenii	49.03	3.00e-115	408.00
IUUC-Mga-059528	Meleagris gallopavo	52.21	5.00e-122	431.00
IUUC-Mmr-060688	Microcebus murinus	57.14	4.00e-110	391.00
IUUC-Mdo-061882	Monodelphis domestica	49.51	3.00e-115	408.00
IUUC-Mmu-064352	Mus musculus	49.38	2.00e-114	405.00
IUUC-Mpu-066712	Mustela putorius furo	56.55	5.00e-108	384.00
IUUC-Mlu-068093	Myotis lucifugus	46.68	9.00e-107	380.00
IUUC-Nle-069310	Nomascus leucogenys	47.93	5.00e-110	390.00
IUUC-Ont-071759	Oreochromis niloticus	65.41	2.00e-126	445.00
IUUC-Oan-073673	Ornithorhynchus anatinus	50.48	2.00e-117	416.00
IUUC-Ocu-074192	Oryctolagus cuniculus	49.64	2.00e-113	402.00
IUUC-Ola-087424	Oryzias latipes	64.05	3.00e-120	425.00
IUUC-Oga-088808	Otolemur garnettii	48.42	2.00e-110	392.00
IUUC-Oar-089553	Ovis aries	48.40	5.00e-111	394.00
IUUC-Ptr-090518	Pan troglodytes	47.70	2.00e-110	392.00
IUUC-Pan-092781	Papio anubis	57.46	3.00e-110	392.00
IUUC-Psi-093914	Pelodiscus sinensis	52.33	7.00e-121	427.00
IUUC-Pfo-096346	Poecilia formosa	53.33	3.00e-123	435.00
IUUC-Pca-100914	Procavia capensis	48.65	2.00e-114	405.00
IUUC-Pva-102728	Pteropus vampyrus	47.91	2.00e-110	392.00
IUUC-Rno-105922	Rattus norvegicus	48.40	3.00e-107	382.00
IUUC-Sha-107124	Sarcophilus harrisii	50.00	2.00e-116	412.00
IUUC-Sar-113607	Sorex araneus	48.66	2.00e-109	389.00
IUUC-Ssc-116355	Sus scrofa	47.69	3.00e-110	391.00
IUUC-Tgu-116476	Taeniopygia guttata	51.72	2.00e-120	425.00
IUUC-Tru-118737	Takifugu rubripes	64.71	5.00e-121	427.00
IUUC-Tsy-118908	Tarsius syrichta	48.43	3.00e-113	401.00
IUUC-Tbe-127258	Tupaia belangeri	48.18	3.00e-111	395.00
IUUC-Vpa-130138	Vicugna pacos	48.67	4.00e-111	394.00
IUUC-Xtr-132100	Xenopus tropicalis	46.97	2.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence