iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053953

Ensembl Protein ID

ENSLAFP00000002264.3

UniProt Accession

G3SR03; G3SR03_LOXAF

Protein Name

Uncharacterized protein

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000002705.3	ENSLAFT00000002705.3	ENSLAFP00000002264.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-08	34.5	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 50   DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLN 87
           78999*******************************97 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

KTKTFGGGGG GARSNLNIST GGNRNREVLQ KEKSTKPEGK HEGVYRELVD EKALKHITEM 60
GFSKEASRQA LMDNGNNLEA ALNVLLNSNK QKPVTGPPLR GKGKGRGRVR SEDEEDLGSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACCAAGA CATTTGGAGG AGGCGGCGGC GGTGCTAGAA GTAATCTCAA TATAAGCACT 60
GGTGGTAACC GAAATAGGGA AGTTTTACAG AAGGAAAAGT CAACCAAACC TGAAGGGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF00567--TUDOR
PF00627--UBA

SMART

SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001751	Ailuropoda melanoleuca	90.91	0.00e+00	830.00
IUUC-Apl-004055	Anas platyrhynchos	71.20	2.00e-172	599.00
IUUC-Aca-004367	Anolis carolinensis	66.21	3.00e-168	585.00
IUUC-Ame-011439	Astyanax mexicanus	39.67	2.00e-62	233.00
IUUC-Bta-012894	Bos taurus	87.75	0.00e+00	822.00
IUUC-Cja-019364	Callithrix jacchus	88.74	0.00e+00	823.00
IUUC-Cfa-021166	Canis familiaris	88.76	0.00e+00	798.00
IUUC-Cpo-021678	Cavia porcellus	84.19	0.00e+00	695.00
IUUC-Csa-023299	Chlorocebus sabaeus	86.96	0.00e+00	852.00
IUUC-Cho-024694	Choloepus hoffmanni	88.38	1.00e-129	456.00
IUUC-Csv-026348	Ciona savignyi	52.94	3.00e-12	62.80
IUUC-Dre-028715	Danio rerio	38.71	4.00e-63	236.00
IUUC-Dno-030091	Dasypus novemcinctus	87.75	0.00e+00	830.00
IUUC-Dor-030807	Dipodomys ordii	83.60	0.00e+00	775.00
IUUC-Dme-031770	Drosophila melanogaster	50.00	5.00e-11	63.20
IUUC-Ete-032507	Echinops telfairi	83.73	0.00e+00	626.00
IUUC-Eca-033406	Equus caballus	89.07	0.00e+00	709.00
IUUC-Eeu-034600	Erinaceus europaeus	86.71	0.00e+00	802.00
IUUC-Fca-035916	Felis catus	89.92	0.00e+00	818.00
IUUC-Fal-036658	Ficedula albicollis	68.64	2.00e-158	552.00
IUUC-Gmo-038974	Gadus morhua	61.46	7.00e-32	132.00
IUUC-Gga-040195	Gallus gallus	71.01	3.00e-179	621.00
IUUC-Gac-042537	Gasterosteus aculeatus	49.69	1.00e-34	141.00
IUUC-Ggo-044715	Gorilla gorilla	87.20	0.00e+00	853.00
IUUC-Hsa-045814	Homo sapiens	88.14	0.00e+00	861.00
IUUC-Itr-047866	Ictidomys tridecemlineatus	88.14	0.00e+00	820.00
IUUC-Lch-050393	Latimeria chalumnae	56.18	1.00e-127	450.00
IUUC-Loc-052859	Lepisosteus oculatus	49.90	4.00e-95	342.00
IUUC-Mcc-055846	Macaca mulatta	86.76	0.00e+00	850.00
IUUC-Meu-056790	Macropus eugenii	69.93	8.00e-170	590.00
IUUC-Mga-059656	Meleagris gallopavo	70.41	3.00e-160	558.00
IUUC-Mmr-061089	Microcebus murinus	86.16	0.00e+00	749.00
IUUC-Mdo-063043	Monodelphis domestica	62.32	1.00e-125	443.00
IUUC-Mmu-063654	Mus musculus	81.23	0.00e+00	713.00
IUUC-Mpu-066115	Mustela putorius furo	88.68	0.00e+00	733.00
IUUC-Mlu-066974	Myotis lucifugus	87.18	0.00e+00	751.00
IUUC-Nle-069184	Nomascus leucogenys	87.35	0.00e+00	855.00
IUUC-Opr-070770	Ochotona princeps	85.18	0.00e+00	816.00
IUUC-Ont-072040	Oreochromis niloticus	70.71	5.00e-39	155.00
IUUC-Oan-073448	Ornithorhynchus anatinus	87.23	2.00e-44	172.00
IUUC-Ocu-074405	Oryctolagus cuniculus	87.75	0.00e+00	806.00
IUUC-Ola-087049	Oryzias latipes	39.43	2.00e-69	257.00
IUUC-Olu-087829	Ostreococcus lucimarinus	35.71	1.40e+00	26.60
IUUC-Oga-088455	Otolemur garnettii	87.75	0.00e+00	819.00
IUUC-Oar-090096	Ovis aries	87.75	0.00e+00	824.00
IUUC-Ptr-090974	Pan troglodytes	87.55	0.00e+00	866.00
IUUC-Pan-092657	Papio anubis	86.96	0.00e+00	852.00
IUUC-Psi-093113	Pelodiscus sinensis	71.60	0.00e+00	653.00
IUUC-Pfo-096631	Poecilia formosa	38.75	3.00e-64	239.00
IUUC-Pab-098070	Pongo abelii	88.34	0.00e+00	864.00
IUUC-Pca-101032	Procavia capensis	84.75	0.00e+00	826.00
IUUC-Pva-102290	Pteropus vampyrus	87.94	0.00e+00	828.00
IUUC-Rno-105080	Rattus norvegicus	78.47	0.00e+00	680.00
IUUC-Sha-107598	Sarcophilus harrisii	80.51	0.00e+00	749.00
IUUC-Sar-113418	Sorex araneus	85.40	0.00e+00	788.00
IUUC-Ssc-115712	Sus scrofa	88.76	0.00e+00	835.00
IUUC-Tgu-117148	Taeniopygia guttata	69.82	6.00e-171	594.00
IUUC-Tru-117831	Takifugu rubripes	72.16	5.00e-38	152.00
IUUC-Tsy-118917	Tarsius syrichta	88.93	0.00e+00	820.00
IUUC-Tni-120783	Tetraodon nigroviridis	50.60	2.00e-34	140.00
IUUC-Ttr-128615	Tursiops truncatus	90.50	0.00e+00	848.00
IUUC-Vpa-130531	Vicugna pacos	90.32	0.00e+00	847.00
IUUC-Xtr-132787	Xenopus tropicalis	52.98	1.00e-115	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence