iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095622

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544892

Gene Name

PHYPADRAFT_24215

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S3_300V6	PP1S3_300V6.1	PP1S3_300V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.60e-80	270.4	255	827

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel....................wkskkk.......... 66
           +Gl NlgNtC++NSv+Q L+ ++ lre++ +         +p+ ++g+l  +l+k+f+e+                    +               
   Q: 255  KGLMNLGNTCFFNSVMQNLVGVSMLREYFSK---------EPSVQEGPLKVALRKFFQEMdvtvldrgdgdddsksasarT----Mrtrsfganvg 337
           59*****************************.........22334678999999999999777776666666655555440....04444455555 PP
   S: 67   .avsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde..aeekkkkknkslisdlFqgqlksqikclec 159
            avsp++l++a++++a++f+g++qqD++E+l++lld+l+ e ++ ++ + + e+ ++ + + +e  +  ++ k   ++++++F+gq++s++ c  c
   Q: 338  nAVSPTRLFSAICAKAPRFKGFQQQDSHELLRCLLDGLHMEEESARKAQLSAESPTEPNGTVKEegSHGNPIKVPVTFVEHVFGGQFSSTVSCCVC 433
           5****************************************97755555444444443333333235555666666******************** PP
   S: 160  dnvssreepfldlslpvpgkeetkke...................................................................... 185
           +++s+ +epfldlslp+p+k+e+k                                                                        
   Q: 434  GHSSVVYEPFLDLSLPIPSKQERKAGsirdqlsksisersrrgnlssngvlsikpaglsfstsqtvdnkpaimegstksekdpvsgcsldggaens 529
           *********************987669********************************************************************* PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 530  kslnepassgsgeekggfptgdtdqtgqavdppvtslpcetvskgvacssethvadawedlvdgsikgtfkecagglvmdvkrnnldnkattsgtp 625
           ************************************************************************************************ PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 626  dgpqsipvvetnpleesstesgegvaenspreilsphgvtdyqaeggvveqldnscqtdevisqygpqpvhgpqlpevhersddkqdcldmvppts 721
           ************************************************************************************************ PP
   S: 186  ......................................................................slqdcLesftkeeelegenkyycekc 211
                                                                                 sl+ cL++ftk+e l gen++ ce+c
   Q: 722  stpgtsnrplevndqaststsnskvavnddsawddaaseckfrgqskdpsslsrsgslrsarevytypmmSLEGCLQAFTKTEVLSGENAWGCENC 817
           ************************************************************************************************ PP
   S: 212  kkkqeaekkl 221
            k  ++++ +
   Q: 818  AKVERSQRNV 827
           9877766554 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGKRQKKKQS NSRSTPQSQR VGALKKDTAS VSTMTPVQLS LGETTGDDST CGSPVSKAEG 60
TVCPHIENGI SVEKLRVRFT IAPLQQCQDC LKRVSNKGKQ AKAKIATKVL WICLGCGHIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCAAGA GACAGAAGAA GAAACAAAGC AACAGCAGGT CAACCCCACA ATCGCAGAGA 60
GTAGGTGCAT TGAAGAAGGA TACTGCATCG GTATCGACTA TGACGCCTGT GCAATTATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_24215

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001931	Ailuropoda melanoleuca	30.65	2.00e-36	147.00
IUUC-Atr-003015	Amborella trichopoda	33.81	2.00e-51	197.00
IUUC-Apl-004145	Anas platyrhynchos	30.05	4.00e-39	155.00
IUUC-Aca-004314	Anolis carolinensis	30.47	2.00e-34	140.00
IUUC-Aly-005494	Arabidopsis lyrata	59.44	2.00e-46	180.00
IUUC-Ath-007211	Arabidopsis thaliana	31.03	1.00e-44	174.00
IUUC-Bci-013590	Botrytis cinerea	31.25	1.00e-15	77.80
IUUC-Bra-016751	Brassica rapa	31.90	1.00e-45	178.00
IUUC-Cel-018257	Caenorhabditis elegans	30.19	5.00e-21	96.30
IUUC-Cfa-020051	Canis familiaris	30.75	1.00e-36	147.00
IUUC-Cpo-021886	Cavia porcellus	30.34	2.00e-40	160.00
IUUC-Dre-028106	Danio rerio	30.47	3.00e-37	149.00
IUUC-Dno-029409	Dasypus novemcinctus	29.40	9.00e-37	148.00
IUUC-Fca-036320	Felis catus	30.68	1.00e-37	150.00
IUUC-Gga-040527	Gallus gallus	29.93	9.00e-38	151.00
IUUC-Gma-044402	Glycine max	32.85	5.00e-53	202.00
IUUC-Hvu-047146	Hordeum vulgare	31.53	4.00e-40	159.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	30.61	2.00e-37	150.00
IUUC-Lch-050536	Latimeria chalumnae	29.38	2.00e-35	143.00
IUUC-Loc-051814	Lepisosteus oculatus	32.45	6.00e-37	148.00
IUUC-Laf-053732	Loxodonta africana	30.73	5.00e-40	159.00
IUUC-Mtr-057945	Medicago truncatula	32.31	7.00e-52	198.00
IUUC-Mga-059551	Meleagris gallopavo	30.10	5.00e-39	155.00
IUUC-Mdo-062220	Monodelphis domestica	29.27	4.00e-38	152.00
IUUC-Mmu-063582	Mus musculus	31.28	1.00e-37	150.00
IUUC-Mac-064941	Musa acuminata	48.28	3.00e-45	176.00
IUUC-Mpu-066339	Mustela putorius furo	30.77	2.00e-36	147.00
IUUC-Mlu-067511	Myotis lucifugus	31.60	7.00e-36	145.00
IUUC-Opr-070969	Ochotona princeps	29.61	2.00e-33	136.00
IUUC-Ont-071786	Oreochromis niloticus	29.15	1.00e-34	141.00
IUUC-Ocu-074704	Oryctolagus cuniculus	30.63	6.00e-38	152.00
IUUC-Oba-075094	Oryza barthii	33.63	1.00e-41	164.00
IUUC-Ogl-077739	Oryza glaberrima	33.63	7.00e-42	165.00
IUUC-Ogu-078851	Oryza glumaepatula	33.63	1.00e-41	164.00
IUUC-Oin-079402	Oryza indica	33.63	1.00e-41	164.00
IUUC-Olo-080431	Oryza longistaminata	33.63	1.00e-41	164.00
IUUC-Ome-081580	Oryza meridionalis	33.63	5.00e-42	166.00
IUUC-Oni-082644	Oryza nivara	33.63	1.00e-41	164.00
IUUC-Oru-084546	Oryza rufipogon	33.63	1.00e-41	164.00
IUUC-Osa-085858	Oryza sativa	33.63	1.00e-41	164.00
IUUC-Ola-086795	Oryzias latipes	30.84	6.00e-37	148.00
IUUC-Oga-088713	Otolemur garnettii	30.16	4.00e-37	149.00
IUUC-Psi-093101	Pelodiscus sinensis	37.02	2.00e-30	126.00
IUUC-Pma-094760	Petromyzon marinus	39.29	3.00e-18	82.80
IUUC-Pfo-097202	Poecilia formosa	28.76	3.00e-38	152.00
IUUC-Pab-098539	Pongo abelii	29.27	6.00e-36	145.00
IUUC-Pop-099136	Populus trichocarpa	31.06	9.00e-54	204.00
IUUC-Ppe-101794	Prunus persica	34.72	8.00e-51	194.00
IUUC-Rno-105237	Rattus norvegicus	30.54	1.00e-36	147.00
IUUC-Sha-106889	Sarcophilus harrisii	29.40	6.00e-36	145.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	34.25	9.00e-17	81.60
IUUC-Sly-111491	Solanum lycopersicum	31.96	2.00e-51	196.00
IUUC-Stu-112820	Solanum tuberosum	34.61	8.00e-55	208.00
IUUC-Sar-113530	Sorex araneus	30.28	3.00e-38	152.00
IUUC-Sre-114910	Sporisorium reilianum	30.54	2.00e-13	70.50
IUUC-Tgu-116907	Taeniopygia guttata	30.44	2.00e-37	150.00
IUUC-Tru-118640	Takifugu rubripes	30.50	2.00e-40	160.00
IUUC-Tni-120015	Tetraodon nigroviridis	28.64	1.00e-35	144.00
IUUC-Tca-121701	Theobroma cacao	32.46	4.00e-54	206.00
IUUC-Ttr-128271	Tursiops truncatus	31.80	2.00e-37	150.00
IUUC-Uma-129375	Ustilago maydis	33.92	4.00e-18	85.90
IUUC-Vpa-130674	Vicugna pacos	30.16	1.00e-36	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence