iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025415

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01000006

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000006722.3	ENSCINT00000013797.3	ENSCINP00000013797.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-35	117.8	249	275
UBD/Beta-Prp	1.00e-51	175.7	239	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDl 30
            ++++f  +d  ++++sdDgt+++WD+
   Q: 249  CRSVCFgpTDAKFATASDDGTVRIWDF 275
           688****655889*************6 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvht 89
           k +++h+++ +++v+f p +  +at+s+dgt+++wd+ + +  + l+gh a v++v+++p++ +l+++s+D    +k+wd+++g+ + t
   Q: 239  KMYQAHKDQACRSVCFGPTDAKFATASDDGTVRIWDFLRCQEEHILKGHGADVKQVDWHPQKGLLASASKDlhTPVKLWDPKSGQSLAT 327
           67899******************************************************************9888************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltg 177
           +++h+ +v++++++++g++++++s+d  ++++d+++ ++  + ++gh++   +v++hp    +++sG+  + ++ W++  +k +  l+g
   Q: 328  VHAHKGTVMDIKWNRNGNWFLTASRDHLVKLYDIRNLKEEVQYFRGHKKEAFSVAWHPIHeEMFASGGSEGSIMYWQVGEDKEIGSLEG 416
           ****************************************99*****************99**************************** PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwd 208
           +h++ + sl++++ g  lvsgs+d + k+w 
   Q: 417  AHDSLIWSLAWHPLGHILVSGSNDHSTKFWT 447
           ******************************6 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MAAIFPNQNL MQPPDQRNEP NQQNQRYSRQ YQPYVFQPNF LKQQMRQREL EKATHLGQLD 60
ATNQASMRAL MQGRISGGNQ MSAANLLDEA NRKKSGRKVI DWTSSCTIYL ERRRWQRESE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTGTTATC AAGTGATATC ATATAATAGG CATATAATAT AATGTTGTGC AATTACTCCA 60
AGCTGTGTTG ATGCAAAAGA AAACTGAGAA TCAGATTCTA AACTAAACAA AACAACAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0006379--P:mRNA cleavage

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	51.76	1.00e-112	399.00
IUUC-Aml-001363	Ailuropoda melanoleuca	61.87	5.00e-165	574.00
IUUC-Atr-003030	Amborella trichopoda	51.59	4.00e-122	430.00
IUUC-Apl-003409	Anas platyrhynchos	61.59	4.00e-163	567.00
IUUC-Aca-004694	Anolis carolinensis	61.68	3.00e-165	575.00
IUUC-Aly-006063	Arabidopsis lyrata	53.83	1.00e-122	432.00
IUUC-Ath-006583	Arabidopsis thaliana	49.87	6.00e-119	420.00
IUUC-Ago-007805	Ashbya gossypii	37.98	3.00e-74	270.00
IUUC-Acl-008075	Aspergillus clavatus	38.35	3.00e-80	291.00
IUUC-Afl-008582	Aspergillus flavus	39.95	2.00e-80	291.00
IUUC-Afu-008817	Aspergillus fumigatus	38.48	5.00e-70	256.00
IUUC-Ani-009391	Aspergillus nidulans	33.77	2.00e-72	265.00
IUUC-Ang-009750	Aspergillus niger	39.35	2.00e-65	241.00
IUUC-Aor-010085	Aspergillus oryzae	38.60	6.00e-81	293.00
IUUC-Ate-010397	Aspergillus terreus	38.52	2.00e-81	295.00
IUUC-Ame-010741	Astyanax mexicanus	56.18	5.00e-90	324.00
IUUC-Bgr-012169	Blumeria graminis	46.15	2.00e-89	322.00
IUUC-Bta-013265	Bos taurus	61.87	3.00e-165	575.00
IUUC-Bci-013762	Botrytis cinerea	44.20	1.00e-92	332.00
IUUC-Bdi-014849	Brachypodium distachyon	54.74	3.00e-123	434.00
IUUC-Bol-015325	Brassica oleracea	53.78	2.00e-125	441.00
IUUC-Bra-017187	Brassica rapa	53.78	3.00e-125	441.00
IUUC-Cel-018378	Caenorhabditis elegans	56.79	9.00e-133	466.00
IUUC-Cja-019547	Callithrix jacchus	61.87	3.00e-165	574.00
IUUC-Cfa-020031	Canis familiaris	61.87	3.00e-165	574.00
IUUC-Cpo-021554	Cavia porcellus	62.04	8.00e-164	570.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	42.48	6.00e-73	266.00
IUUC-Csa-023146	Chlorocebus sabaeus	62.10	1.00e-165	576.00
IUUC-Cho-024679	Choloepus hoffmanni	55.43	2.00e-149	522.00
IUUC-Csv-026003	Ciona savignyi	86.84	0.00e+00	856.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	45.45	3.00e-91	327.00
IUUC-Cne-026983	Cryptococcus neoformans	37.28	2.00e-81	295.00
IUUC-Cme-027147	Cyanidioschyzon merolae	46.70	4.00e-105	373.00
IUUC-Dre-028545	Danio rerio	60.47	1.00e-171	595.00
IUUC-Dno-029677	Dasypus novemcinctus	61.59	6.00e-165	573.00
IUUC-Dse-031371	Dothistroma septosporum	42.67	8.00e-84	303.00
IUUC-Dme-031663	Drosophila melanogaster	58.92	2.00e-165	575.00
IUUC-Ete-032511	Echinops telfairi	54.79	4.00e-140	491.00
IUUC-Eca-034152	Equus caballus	61.87	4.00e-165	574.00
IUUC-Eeu-034560	Erinaceus europaeus	47.94	4.00e-49	189.00
IUUC-Fca-035820	Felis catus	61.87	5.00e-165	574.00
IUUC-Fox-037958	Fusarium oxysporum	44.51	3.00e-89	321.00
IUUC-Fso-038162	Fusarium solani	44.51	3.00e-88	317.00
IUUC-Gmo-039708	Gadus morhua	58.53	3.00e-167	581.00
IUUC-Ggr-040031	Gaeumannomyces graminis	41.37	1.00e-78	285.00
IUUC-Gga-040963	Gallus gallus	61.87	1.00e-164	572.00
IUUC-Gac-041541	Gasterosteus aculeatus	57.77	1.00e-162	565.00
IUUC-Gma-044352	Glycine max	53.93	5.00e-124	436.00
IUUC-Ggo-045564	Gorilla gorilla	61.59	6.00e-165	573.00
IUUC-Hsa-045833	Homo sapiens	61.87	4.00e-165	574.00
IUUC-Hvu-047848	Hordeum vulgare	55.73	1.00e-88	318.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	61.87	5.00e-165	574.00
IUUC-Kpa-049308	Komagataella pastoris	38.60	9.00e-74	269.00
IUUC-Lch-050525	Latimeria chalumnae	59.24	5.00e-167	580.00
IUUC-Lpe-051364	Leersia perrieri	49.86	7.00e-110	390.00
IUUC-Loc-052696	Lepisosteus oculatus	59.12	5.00e-166	577.00
IUUC-Lma-052951	Leptosphaeria maculans	45.60	1.00e-94	338.00
IUUC-Laf-053653	Loxodonta africana	61.87	5.00e-165	573.00
IUUC-Mcc-055797	Macaca mulatta	61.87	3.00e-165	575.00
IUUC-Meu-056331	Macropus eugenii	63.81	5.00e-123	434.00
IUUC-Mor-057168	Magnaporthe oryzae	41.92	2.00e-84	305.00
IUUC-Mpo-057510	Magnaporthe poae	44.40	4.00e-55	207.00
IUUC-Mtr-058032	Medicago truncatula	54.59	3.00e-123	434.00
IUUC-Mla-058852	Melampsora laricipopulina	46.12	1.00e-103	369.00
IUUC-Mga-059311	Meleagris gallopavo	61.40	3.00e-164	571.00
IUUC-Mvi-060544	Microbotryum violaceum	53.45	2.00e-105	374.00
IUUC-Mmr-061143	Microcebus murinus	61.87	3.00e-165	575.00
IUUC-Mdo-061977	Monodelphis domestica	61.87	8.00e-165	573.00
IUUC-Mmu-063922	Mus musculus	61.87	2.00e-165	575.00
IUUC-Mac-064961	Musa acuminata	54.32	5.00e-125	440.00
IUUC-Mpu-066079	Mustela putorius furo	66.06	7.00e-155	540.00
IUUC-Mlu-067247	Myotis lucifugus	61.87	4.00e-165	574.00
IUUC-Nfi-068255	Neosartorya fischeri	40.00	2.00e-77	281.00
IUUC-Ncr-068909	Neurospora crassa	39.77	8.00e-88	316.00
IUUC-Nle-068994	Nomascus leucogenys	61.87	4.00e-165	574.00
IUUC-Opr-071079	Ochotona princeps	61.10	7.00e-161	560.00
IUUC-Ont-071971	Oreochromis niloticus	58.99	1.00e-168	585.00
IUUC-Oan-073135	Ornithorhynchus anatinus	62.84	4.00e-156	544.00
IUUC-Ocu-073982	Oryctolagus cuniculus	61.87	1.00e-164	573.00
IUUC-Oba-075297	Oryza barthii	49.86	2.00e-111	395.00
IUUC-Obr-076641	Oryza brachyantha	53.66	2.00e-122	431.00
IUUC-Ogl-077539	Oryza glaberrima	56.11	1.00e-89	322.00
IUUC-Ogu-078807	Oryza glumaepatula	49.86	2.00e-111	395.00
IUUC-Oin-079229	Oryza indica	53.66	2.00e-123	435.00
IUUC-Olo-080371	Oryza longistaminata	49.86	2.00e-111	394.00
IUUC-Ome-081149	Oryza meridionalis	49.86	5.00e-111	394.00
IUUC-Oni-082970	Oryza nivara	49.86	2.00e-111	395.00
IUUC-Opu-083415	Oryza punctata	49.32	2.00e-108	384.00
IUUC-Oru-085236	Oryza rufipogon	49.86	9.00e-112	396.00
IUUC-Ola-087421	Oryzias latipes	58.99	3.00e-169	586.00
IUUC-Olu-087821	Ostreococcus lucimarinus	48.51	3.00e-102	363.00
IUUC-Oga-088132	Otolemur garnettii	61.87	5.00e-165	574.00
IUUC-Oar-089513	Ovis aries	61.87	3.00e-165	575.00
IUUC-Ptr-090717	Pan troglodytes	61.87	5.00e-165	574.00
IUUC-Pan-092108	Papio anubis	61.87	4.00e-165	574.00
IUUC-Psi-093892	Pelodiscus sinensis	58.08	1.00e-164	573.00
IUUC-Pma-094561	Petromyzon marinus	59.75	1.00e-167	582.00
IUUC-Pno-094943	Phaeosphaeria nodorum	43.13	2.00e-90	324.00
IUUC-Ppa-095359	Physcomitrella patens	52.40	8.00e-132	462.00
IUUC-Pfo-096516	Poecilia formosa	59.07	4.00e-166	577.00
IUUC-Pab-097759	Pongo abelii	61.87	3.00e-165	574.00
IUUC-Pop-098892	Populus trichocarpa	53.78	1.00e-124	439.00
IUUC-Ppe-101957	Prunus persica	54.05	1.00e-125	442.00
IUUC-Pva-102918	Pteropus vampyrus	61.87	5.00e-165	574.00
IUUC-Pgr-103594	Puccinia graminis	49.07	2.00e-107	382.00
IUUC-Ptt-103879	Puccinia triticina	54.33	1.00e-97	349.00
IUUC-Pte-104419	Pyrenophora teres	43.00	4.00e-96	343.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	45.05	1.00e-93	336.00
IUUC-Rno-105838	Rattus norvegicus	61.87	7.00e-165	573.00
IUUC-Sce-106331	Saccharomyces cerevisiae	37.64	4.00e-72	263.00
IUUC-Sha-107435	Sarcophilus harrisii	61.59	1.00e-163	569.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	40.45	1.00e-87	315.00
IUUC-Spo-108163	Schizosaccharomyces pombe	41.46	2.00e-91	328.00
IUUC-Smo-109602	Selaginella moellendorffii	54.66	6.00e-127	445.00
IUUC-Sit-109729	Setaria italica	54.74	4.00e-124	437.00
IUUC-Sly-111679	Solanum lycopersicum	48.98	2.00e-125	441.00
IUUC-Sar-113157	Sorex araneus	61.87	8.00e-165	573.00
IUUC-Sbi-114853	Sorghum bicolor	54.47	1.00e-123	435.00
IUUC-Sre-115085	Sporisorium reilianum	42.13	7.00e-90	323.00
IUUC-Ssc-116286	Sus scrofa	61.73	1.00e-163	569.00
IUUC-Tgu-117219	Taeniopygia guttata	61.87	2.00e-164	572.00
IUUC-Tru-117550	Takifugu rubripes	58.56	3.00e-167	580.00
IUUC-Tsy-119294	Tarsius syrichta	61.87	2.00e-165	575.00
IUUC-Tni-120561	Tetraodon nigroviridis	58.11	9.00e-168	582.00
IUUC-Tca-121347	Theobroma cacao	52.52	9.00e-124	436.00
IUUC-Tre-122018	Trichoderma reesei	45.33	1.00e-90	325.00
IUUC-Tvi-122413	Trichoderma virens	45.05	4.00e-89	320.00
IUUC-Tae-123904	Triticum aestivum	54.20	4.00e-122	430.00
IUUC-Tme-127077	Tuber melanosporum	45.14	3.00e-92	330.00
IUUC-Tbe-127744	Tupaia belangeri	46.44	1.00e-86	313.00
IUUC-Ttr-128777	Tursiops truncatus	53.90	6.00e-135	474.00
IUUC-Uma-129568	Ustilago maydis	46.57	3.00e-88	318.00
IUUC-Vda-129834	Verticillium dahliae	42.86	3.00e-85	308.00
IUUC-Vpa-130563	Vicugna pacos	46.39	4.00e-43	168.00
IUUC-Vvi-131360	Vitis vinifera	47.96	3.00e-126	444.00
IUUC-Xtr-132630	Xenopus tropicalis	61.45	5.00e-166	577.00
IUUC-Xma-133665	Xiphophorus maculatus	59.20	8.00e-168	583.00
IUUC-Yli-134556	Yarrowia lipolytica	39.69	1.00e-77	282.00
IUUC-Zma-135787	Zea mays	55.01	6.00e-125	440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence