iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039816

Ensembl Protein ID

GGTG_11325T0

UniProt Accession

J3PCV6; J3PCV6_GAGT3

Genbank Protein ID

EJT72077.1

Protein Name

U3 small nucleolar RNA associated protein

Genbank Nucleotide ID

ADBI01000926

Gene Name

GGTG_11325

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_11325	GGTG_11325T0	GGTG_11325T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-39	130.7	62	96
UBD/Beta-Prp	3.20e-42	144.3	251	353

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrt 32
           gH dsv+++   ++   +++sGs Dg++k+WDl++
   Q: 62   GHVDSVFSMTMdPGslSRVASGSADGVVKIWDLTS 96
           8********999554678**************986 PP

UBD/Beta-Prp

   S: 67   lvtgseDrtikvwdlstgk.cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvr 162
           ++ +seD++i+++d+++ +  + +lkgh + v++++fsp+g+ lvsGs drtir+w+ ++g  +    +++++ v ++++ pd++++ sGs+D+ +r
   Q: 251  FAVASEDHNIYIFDMRKIDrALNVLKGHVAAVMDVRFSPNGEELVSGSYDRTIRLWKKDKGHSVDIYHTKRMQRVFSATWTPDNKYVLSGSDDGNIR 347
           6889999999999999765278899999999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 163  lWdlkt 168
           lW+ k 
   Q: 348  LWRAKA 353
           998744 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MKVKALSRAP QQPAGSDVAR KPKNVDPALH PFERAREYQR ALNAVKLERM FAAPFICQLG 60
KGHVDSVFSM TMDPGSLSRV ASGSADGVVK IWDLTSREEA WHTTAHENIV KDLCFTKDKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCTGTTGC AGCCATCCAT CGCAGCGGCG GGGCTTCCTC ACGATCAAAT GTTGCTGGGC 60
AAAAGTCTGT CGCCATAACG TCGGCGCTGC CTCACACAGG GTTACCAAGC ACAGCAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	43.53	7.00e-104	369.00
IUUC-Atr-002799	Amborella trichopoda	42.86	2.00e-98	350.00
IUUC-Apl-003675	Anas platyrhynchos	46.01	7.00e-102	362.00
IUUC-Aca-004792	Anolis carolinensis	45.41	1.00e-109	388.00
IUUC-Aly-005998	Arabidopsis lyrata	40.97	2.00e-94	337.00
IUUC-Ath-007526	Arabidopsis thaliana	41.06	6.00e-93	332.00
IUUC-Ago-007774	Ashbya gossypii	48.39	9.00e-125	438.00
IUUC-Acl-008024	Aspergillus clavatus	68.83	0.00e+00	644.00
IUUC-Afu-008930	Aspergillus fumigatus	66.02	0.00e+00	629.00
IUUC-Ani-009370	Aspergillus nidulans	69.57	0.00e+00	647.00
IUUC-Ang-009827	Aspergillus niger	68.90	0.00e+00	646.00
IUUC-Aor-010060	Aspergillus oryzae	68.53	0.00e+00	624.00
IUUC-Ate-010434	Aspergillus terreus	68.98	1.00e-153	534.00
IUUC-Ame-011967	Astyanax mexicanus	45.43	1.00e-107	381.00
IUUC-Bgr-011989	Blumeria graminis	74.27	0.00e+00	710.00
IUUC-Bta-013291	Bos taurus	35.02	2.00e-62	231.00
IUUC-Bci-013868	Botrytis cinerea	74.72	0.00e+00	715.00
IUUC-Bdi-014343	Brachypodium distachyon	41.15	2.00e-92	330.00
IUUC-Bol-015740	Brassica oleracea	39.13	2.00e-87	314.00
IUUC-Bra-016689	Brassica rapa	39.13	2.00e-87	314.00
IUUC-Cel-018536	Caenorhabditis elegans	38.57	7.00e-78	282.00
IUUC-Cja-018779	Callithrix jacchus	43.88	2.00e-106	377.00
IUUC-Cfa-020105	Canis familiaris	44.32	6.00e-107	379.00
IUUC-Cpo-021538	Cavia porcellus	46.17	2.00e-104	371.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	45.34	9.00e-40	154.00
IUUC-Csa-023492	Chlorocebus sabaeus	44.10	2.00e-106	377.00
IUUC-Cho-024497	Choloepus hoffmanni	37.42	5.00e-60	223.00
IUUC-Cin-025524	Ciona intestinalis	42.70	3.00e-102	363.00
IUUC-Csv-026197	Ciona savignyi	42.06	4.00e-100	356.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	68.30	0.00e+00	635.00
IUUC-Cne-026840	Cryptococcus neoformans	37.97	1.00e-77	283.00
IUUC-Cme-027111	Cyanidioschyzon merolae	33.41	4.00e-71	260.00
IUUC-Dre-027471	Danio rerio	45.14	8.00e-109	385.00
IUUC-Dno-029790	Dasypus novemcinctus	47.23	6.00e-89	319.00
IUUC-Dor-030971	Dipodomys ordii	34.97	8.00e-70	256.00
IUUC-Dse-031563	Dothistroma septosporum	65.32	2.00e-176	610.00
IUUC-Dme-032161	Drosophila melanogaster	44.37	3.00e-107	380.00
IUUC-Ete-033127	Echinops telfairi	40.80	2.00e-92	331.00
IUUC-Eca-033531	Equus caballus	44.26	1.00e-102	365.00
IUUC-Eeu-034663	Erinaceus europaeus	36.83	6.00e-80	290.00
IUUC-Fca-036258	Felis catus	44.32	4.00e-107	380.00
IUUC-Fal-037456	Ficedula albicollis	47.44	2.00e-108	384.00
IUUC-Fox-038025	Fusarium oxysporum	73.71	0.00e+00	706.00
IUUC-Fso-038344	Fusarium solani	74.16	0.00e+00	662.00
IUUC-Gmo-039643	Gadus morhua	42.76	3.00e-103	367.00
IUUC-Gga-040143	Gallus gallus	46.39	7.00e-107	379.00
IUUC-Gac-041665	Gasterosteus aculeatus	45.16	4.00e-109	386.00
IUUC-Gma-043073	Glycine max	42.21	2.00e-95	341.00
IUUC-Ggo-045058	Gorilla gorilla	43.88	4.00e-106	377.00
IUUC-Hsa-046843	Homo sapiens	43.88	1.00e-105	375.00
IUUC-Hvu-047654	Hordeum vulgare	43.94	1.00e-57	214.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	43.88	1.00e-106	378.00
IUUC-Kpa-049232	Komagataella pastoris	48.14	2.00e-127	447.00
IUUC-Lch-050542	Latimeria chalumnae	45.67	1.00e-106	378.00
IUUC-Lpe-051622	Leersia perrieri	40.31	1.00e-91	328.00
IUUC-Loc-052674	Lepisosteus oculatus	43.51	4.00e-105	373.00
IUUC-Lma-053108	Leptosphaeria maculans	66.14	0.00e+00	629.00
IUUC-Laf-053385	Loxodonta africana	44.32	2.00e-104	370.00
IUUC-Mcc-055151	Macaca mulatta	43.65	9.00e-106	375.00
IUUC-Meu-056230	Macropus eugenii	46.73	2.00e-48	185.00
IUUC-Mor-057013	Magnaporthe oryzae	88.69	0.00e+00	803.00
IUUC-Mpo-057530	Magnaporthe poae	97.74	0.00e+00	862.00
IUUC-Mtr-058187	Medicago truncatula	41.49	2.00e-94	337.00
IUUC-Mla-058964	Melampsora laricipopulina	37.53	2.00e-86	311.00
IUUC-Mga-059712	Meleagris gallopavo	46.59	2.00e-104	370.00
IUUC-Mvi-060370	Microbotryum violaceum	39.62	6.00e-66	243.00
IUUC-Mmr-061340	Microcebus murinus	42.83	7.00e-100	356.00
IUUC-Mdo-062978	Monodelphis domestica	46.65	5.00e-112	395.00
IUUC-Mmu-063439	Mus musculus	44.74	9.00e-109	385.00
IUUC-Mac-065129	Musa acuminata	39.87	2.00e-95	340.00
IUUC-Mpu-066548	Mustela putorius furo	41.58	1.00e-82	298.00
IUUC-Mlu-067660	Myotis lucifugus	43.65	9.00e-106	375.00
IUUC-Nfi-068455	Neosartorya fischeri	69.06	0.00e+00	644.00
IUUC-Ncr-068848	Neurospora crassa	64.94	4.00e-174	602.00
IUUC-Nle-069923	Nomascus leucogenys	43.43	4.00e-105	373.00
IUUC-Opr-070279	Ochotona princeps	36.32	1.00e-29	122.00
IUUC-Ont-072234	Oreochromis niloticus	44.15	3.00e-108	383.00
IUUC-Oan-073713	Ornithorhynchus anatinus	39.20	5.00e-34	135.00
IUUC-Ocu-073782	Oryctolagus cuniculus	44.32	2.00e-107	380.00
IUUC-Oba-075161	Oryza barthii	40.97	7.00e-93	332.00
IUUC-Obr-076868	Oryza brachyantha	40.97	9.00e-93	332.00
IUUC-Ogl-077062	Oryza glaberrima	40.97	7.00e-93	332.00
IUUC-Ogu-078308	Oryza glumaepatula	40.97	8.00e-93	332.00
IUUC-Oin-079378	Oryza indica	40.97	8.00e-93	332.00
IUUC-Olo-080638	Oryza longistaminata	39.95	4.00e-84	303.00
IUUC-Oni-082368	Oryza nivara	40.97	8.00e-93	332.00
IUUC-Opu-083628	Oryza punctata	40.97	8.00e-93	332.00
IUUC-Oru-085226	Oryza rufipogon	40.75	2.00e-92	331.00
IUUC-Osa-085368	Oryza sativa	35.85	6.00e-40	155.00
IUUC-Ola-086836	Oryzias latipes	45.03	1.00e-109	388.00
IUUC-Olu-087755	Ostreococcus lucimarinus	41.94	9.00e-98	348.00
IUUC-Oga-088170	Otolemur garnettii	44.32	2.00e-107	381.00
IUUC-Oar-089388	Ovis aries	44.54	2.00e-107	381.00
IUUC-Ptr-090494	Pan troglodytes	43.88	8.00e-106	375.00
IUUC-Pan-091697	Papio anubis	44.10	3.00e-106	377.00
IUUC-Psi-093916	Pelodiscus sinensis	45.64	7.00e-106	375.00
IUUC-Pno-095004	Phaeosphaeria nodorum	63.45	1.00e-171	593.00
IUUC-Ppa-095514	Physcomitrella patens	40.31	2.00e-97	347.00
IUUC-Pfo-097432	Poecilia formosa	46.68	2.00e-109	387.00
IUUC-Pab-098423	Pongo abelii	43.65	4.00e-106	376.00
IUUC-Pop-099649	Populus trichocarpa	41.51	3.00e-98	350.00
IUUC-Pca-100365	Procavia capensis	43.87	2.00e-96	344.00
IUUC-Ppe-101350	Prunus persica	41.38	1.00e-98	351.00
IUUC-Pva-102845	Pteropus vampyrus	43.05	2.00e-103	368.00
IUUC-Pgr-103469	Puccinia graminis	34.88	4.00e-60	224.00
IUUC-Ptt-103980	Puccinia triticina	36.53	2.00e-61	228.00
IUUC-Pte-104111	Pyrenophora teres	65.92	1.00e-170	590.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	65.92	6.00e-170	588.00
IUUC-Rno-105082	Rattus norvegicus	44.74	4.00e-109	386.00
IUUC-Sce-106340	Saccharomyces cerevisiae	47.44	5.00e-125	439.00
IUUC-Sha-106584	Sarcophilus harrisii	46.43	8.00e-113	398.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	50.23	9.00e-116	408.00
IUUC-Spo-108046	Schizosaccharomyces pombe	48.42	1.00e-121	427.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	74.72	0.00e+00	715.00
IUUC-Smo-109548	Selaginella moellendorffii	42.16	7.00e-100	355.00
IUUC-Sit-110242	Setaria italica	39.87	9.00e-90	322.00
IUUC-Sly-111762	Solanum lycopersicum	39.82	1.00e-91	328.00
IUUC-Stu-112156	Solanum tuberosum	39.82	1.00e-91	328.00
IUUC-Sbi-114104	Sorghum bicolor	40.31	1.00e-91	328.00
IUUC-Sre-114951	Sporisorium reilianum	42.63	9.00e-112	395.00
IUUC-Ssc-115510	Sus scrofa	44.32	3.00e-107	380.00
IUUC-Tgu-117234	Taeniopygia guttata	47.53	4.00e-103	366.00
IUUC-Tru-117986	Takifugu rubripes	44.30	3.00e-106	377.00
IUUC-Tsy-119252	Tarsius syrichta	43.16	5.00e-98	350.00
IUUC-Tni-119785	Tetraodon nigroviridis	45.92	1.00e-104	371.00
IUUC-Tca-121222	Theobroma cacao	43.30	4.00e-96	343.00
IUUC-Tre-122243	Trichoderma reesei	73.93	0.00e+00	706.00
IUUC-Tvi-122293	Trichoderma virens	72.81	0.00e+00	699.00
IUUC-Tae-125191	Triticum aestivum	40.83	7.00e-87	312.00
IUUC-Tur-126098	Triticum urartu	39.21	7.00e-80	289.00
IUUC-Tme-127200	Tuber melanosporum	58.93	2.00e-156	543.00
IUUC-Tbe-127568	Tupaia belangeri	42.61	3.00e-49	187.00
IUUC-Ttr-129185	Tursiops truncatus	38.53	2.00e-86	311.00
IUUC-Uma-129353	Ustilago maydis	42.23	1.00e-110	391.00
IUUC-Vda-129768	Verticillium dahliae	68.97	0.00e+00	656.00
IUUC-Vpa-130572	Vicugna pacos	44.10	3.00e-106	377.00
IUUC-Vvi-131555	Vitis vinifera	42.43	1.00e-95	342.00
IUUC-Xtr-132263	Xenopus tropicalis	46.32	2.00e-89	320.00
IUUC-Xma-133925	Xiphophorus maculatus	45.85	1.00e-107	381.00
IUUC-Yli-134384	Yarrowia lipolytica	50.23	1.00e-128	451.00
IUUC-Zma-135616	Zea mays	41.63	9.00e-93	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence