iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003519

Ensembl Protein ID

ENSAPLP00000008239.1

UniProt Accession

U3ILW7; U3ILW7_ANAPL

Genbank Protein ID

ENSAPLP00000008239

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01097280

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000008515.1	ENSAPLT00000008914.1	ENSAPLP00000008239.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-56	183.3	432	471
UBD/Beta-Prp	1.80e-112	375.1	328	553

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+ +++c++f   d +l+++s Dgt+k+W l ++ +lk+
   Q: 432  GHKRGIWCVQFspVDQILATSSADGTLKLWGLQDFSCLKT 471
           8**********975599*******************9986 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgk.ilvtgseDrtikvwdls................tgkcvhtlkghedsvlslsfspsgdklvsGshdrti 118
           +  gh  +v av++s+ ++ ++vt+s+D tikvw++                 t    +t +gh++++ s+++sp+++ +++Gs+dr +
   Q: 328  QGLGHAHGVGAVSCSRMKEsFMVTSSQDCTIKVWNIPesliskakaalisspeTLHAQVTERGHDKDINSVAVSPNDKLIATGSQDRLA 416
           55688888888888877666**************7766777888888888555667777778*************************** PP
   S: 119  rvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs.gsldgtvkl 206
           ++w  +  + l  +++gh++ ++cv+++p +++l+++s+D+t++lW l+  ++l+t++g h+ sv +++f s g++l+s  + dg +kl
   Q: 417  KLWSCSDCSLLG-VFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEG-HDASVLKVIFVSRGTQLLSrSGSDGLLKL 503
           ****99999999.*********************************************9.*********99999777762679****** PP
   S: 207  wdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgd 255
           w ++t+ecv+tl gh+d ++ ++  ++d+ +v++ssD si +W d++  +
   Q: 504  WTIKTNECVKTLDGHEDKIWGLHSNKQDDMVVTASSDSSITLWkDVTEIE 553
           *******************************************8665544 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

KDDQEDITAF ALSPDDEILV TGSRALLLKQ WNWRESKCVR TWKAVHVAPV ASMAFDSTST 60
LLASGGCDST IKIWDMIKQY CTHNLKGSSG VVHLVEFHPD ISRLQLFSSS MDYKIRIWDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGATGACC AAGAGGATAT CACTGCGTTT GCGCTTAGCC CTGACGATGA GGTATGTCTT 60
GGACTGTTTG CTTTGTGTTA AATTCTTTTG GGCTTCCTGA CAAACCTGGT GAAGACTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	34.61	1.00e-123	436.00
IUUC-Aml-002376	Ailuropoda melanoleuca	61.18	0.00e+00	895.00
IUUC-Atr-002486	Amborella trichopoda	36.84	2.00e-140	493.00
IUUC-Aca-004363	Anolis carolinensis	55.33	4.00e-118	417.00
IUUC-Aly-006152	Arabidopsis lyrata	31.30	5.00e-104	372.00
IUUC-Ath-006966	Arabidopsis thaliana	31.48	1.00e-103	370.00
IUUC-Ago-007746	Ashbya gossypii	30.24	4.00e-99	355.00
IUUC-Acl-008009	Aspergillus clavatus	27.92	6.00e-96	345.00
IUUC-Afl-008681	Aspergillus flavus	27.25	1.00e-85	311.00
IUUC-Afu-008798	Aspergillus fumigatus	27.45	7.00e-85	308.00
IUUC-Ani-009278	Aspergillus nidulans	27.61	7.00e-96	345.00
IUUC-Ang-009640	Aspergillus niger	28.91	2.00e-94	340.00
IUUC-Aor-010160	Aspergillus oryzae	27.14	1.00e-84	307.00
IUUC-Ate-010320	Aspergillus terreus	27.59	1.00e-94	340.00
IUUC-Ame-010930	Astyanax mexicanus	76.51	2.00e-68	251.00
IUUC-Bgr-012054	Blumeria graminis	30.22	7.00e-91	328.00
IUUC-Bta-012611	Bos taurus	60.68	0.00e+00	859.00
IUUC-Bci-013797	Botrytis cinerea	29.02	2.00e-95	343.00
IUUC-Bdi-014384	Brachypodium distachyon	36.93	2.00e-144	506.00
IUUC-Bol-016483	Brassica oleracea	31.28	1.00e-104	374.00
IUUC-Bra-017328	Brassica rapa	31.75	2.00e-101	363.00
IUUC-Cel-018664	Caenorhabditis elegans	31.95	1.00e-106	380.00
IUUC-Cja-019092	Callithrix jacchus	61.64	0.00e+00	899.00
IUUC-Cfa-021040	Canis familiaris	61.56	0.00e+00	886.00
IUUC-Cpo-022529	Cavia porcellus	61.29	0.00e+00	872.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	57.35	5.00e-44	169.00
IUUC-Csa-024205	Chlorocebus sabaeus	61.51	0.00e+00	899.00
IUUC-Cin-025560	Ciona intestinalis	46.68	0.00e+00	669.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.78	2.00e-98	353.00
IUUC-Cne-027082	Cryptococcus neoformans	33.57	5.00e-80	292.00
IUUC-Cme-027159	Cyanidioschyzon merolae	22.81	3.00e-26	114.00
IUUC-Dre-028138	Danio rerio	40.81	1.00e-153	536.00
IUUC-Dno-029914	Dasypus novemcinctus	53.49	7.00e-169	587.00
IUUC-Dor-030685	Dipodomys ordii	56.42	2.00e-147	515.00
IUUC-Dse-031429	Dothistroma septosporum	27.34	7.00e-83	301.00
IUUC-Dme-031995	Drosophila melanogaster	33.51	4.00e-107	382.00
IUUC-Ete-033086	Echinops telfairi	69.40	2.00e-178	619.00
IUUC-Eca-034354	Equus caballus	61.45	0.00e+00	868.00
IUUC-Eeu-034832	Erinaceus europaeus	67.19	2.00e-177	615.00
IUUC-Fca-036136	Felis catus	63.21	0.00e+00	902.00
IUUC-Fal-036859	Ficedula albicollis	77.91	0.00e+00	1121.00
IUUC-Fox-037863	Fusarium oxysporum	28.20	3.00e-94	339.00
IUUC-Fso-038389	Fusarium solani	27.83	1.00e-95	343.00
IUUC-Gmo-038711	Gadus morhua	52.62	0.00e+00	719.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.28	1.00e-88	321.00
IUUC-Gga-040263	Gallus gallus	70.72	0.00e+00	987.00
IUUC-Gac-041291	Gasterosteus aculeatus	60.51	0.00e+00	919.00
IUUC-Gma-044026	Glycine max	37.40	2.00e-146	513.00
IUUC-Ggo-044693	Gorilla gorilla	61.78	0.00e+00	880.00
IUUC-Hsa-046048	Homo sapiens	61.92	0.00e+00	881.00
IUUC-Hvu-047608	Hordeum vulgare	37.81	2.00e-144	506.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	62.38	0.00e+00	917.00
IUUC-Kpa-049209	Komagataella pastoris	33.88	2.00e-110	393.00
IUUC-Lch-050085	Latimeria chalumnae	56.47	0.00e+00	775.00
IUUC-Lpe-050945	Leersia perrieri	37.19	4.00e-142	498.00
IUUC-Loc-052679	Lepisosteus oculatus	62.55	0.00e+00	973.00
IUUC-Laf-053685	Loxodonta africana	60.49	0.00e+00	852.00
IUUC-Mcc-055861	Macaca mulatta	61.51	0.00e+00	874.00
IUUC-Meu-056820	Macropus eugenii	57.08	0.00e+00	738.00
IUUC-Mor-057234	Magnaporthe oryzae	28.95	7.00e-92	331.00
IUUC-Mpo-057456	Magnaporthe poae	28.30	1.00e-64	241.00
IUUC-Mtr-058122	Medicago truncatula	37.48	1.00e-148	520.00
IUUC-Mla-058980	Melampsora laricipopulina	29.08	2.00e-77	283.00
IUUC-Mga-060080	Meleagris gallopavo	71.39	0.00e+00	986.00
IUUC-Mvi-060338	Microbotryum violaceum	33.50	2.00e-123	436.00
IUUC-Mmr-060762	Microcebus murinus	62.47	0.00e+00	892.00
IUUC-Mdo-061975	Monodelphis domestica	62.47	0.00e+00	867.00
IUUC-Mmu-064038	Mus musculus	61.42	0.00e+00	875.00
IUUC-Mac-065189	Musa acuminata	33.06	1.00e-109	390.00
IUUC-Mpu-066526	Mustela putorius furo	60.82	0.00e+00	856.00
IUUC-Mlu-067716	Myotis lucifugus	61.83	0.00e+00	935.00
IUUC-Nfi-068474	Neosartorya fischeri	27.41	1.00e-86	314.00
IUUC-Ncr-068826	Neurospora crassa	26.99	2.00e-82	300.00
IUUC-Nle-069832	Nomascus leucogenys	62.05	0.00e+00	910.00
IUUC-Opr-071183	Ochotona princeps	58.77	0.00e+00	851.00
IUUC-Ont-072371	Oreochromis niloticus	60.03	0.00e+00	899.00
IUUC-Oan-073491	Ornithorhynchus anatinus	59.71	0.00e+00	784.00
IUUC-Oba-075963	Oryza barthii	37.89	2.00e-149	522.00
IUUC-Obr-076173	Oryza brachyantha	37.89	3.00e-148	519.00
IUUC-Ogl-077692	Oryza glaberrima	37.81	3.00e-150	525.00
IUUC-Ogu-078965	Oryza glumaepatula	38.02	1.00e-149	523.00
IUUC-Oin-079708	Oryza indica	37.76	6.00e-149	521.00
IUUC-Olo-080679	Oryza longistaminata	37.68	3.00e-147	515.00
IUUC-Oni-082960	Oryza nivara	37.63	1.00e-148	520.00
IUUC-Opu-083282	Oryza punctata	37.39	5.00e-143	501.00
IUUC-Oru-085224	Oryza rufipogon	37.89	2.00e-149	523.00
IUUC-Osa-085320	Oryza sativa	37.89	2.00e-149	523.00
IUUC-Ola-086370	Oryzias latipes	45.01	1.00e-96	347.00
IUUC-Olu-087814	Ostreococcus lucimarinus	29.61	4.00e-91	329.00
IUUC-Oga-088458	Otolemur garnettii	61.64	0.00e+00	929.00
IUUC-Oar-090032	Ovis aries	54.95	0.00e+00	647.00
IUUC-Ptr-090749	Pan troglodytes	61.59	0.00e+00	880.00
IUUC-Pan-091691	Papio anubis	59.45	0.00e+00	832.00
IUUC-Psi-093200	Pelodiscus sinensis	63.82	0.00e+00	903.00
IUUC-Pma-094165	Petromyzon marinus	55.98	3.00e-145	508.00
IUUC-Pno-095048	Phaeosphaeria nodorum	29.16	4.00e-79	289.00
IUUC-Ppa-095336	Physcomitrella patens	40.50	8.00e-144	504.00
IUUC-Pfo-096132	Poecilia formosa	51.15	0.00e+00	684.00
IUUC-Pab-097855	Pongo abelii	61.37	0.00e+00	896.00
IUUC-Pop-099858	Populus trichocarpa	36.75	4.00e-135	475.00
IUUC-Pca-100232	Procavia capensis	68.83	5.00e-86	311.00
IUUC-Ppe-101665	Prunus persica	30.98	2.00e-107	383.00
IUUC-Pva-102178	Pteropus vampyrus	62.14	0.00e+00	884.00
IUUC-Pgr-103288	Puccinia graminis	29.37	5.00e-55	209.00
IUUC-Ptt-103808	Puccinia triticina	31.59	2.00e-75	276.00
IUUC-Pte-104205	Pyrenophora teres	29.50	2.00e-91	330.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.56	7.00e-88	318.00
IUUC-Rno-105617	Rattus norvegicus	61.48	0.00e+00	872.00
IUUC-Sce-106281	Saccharomyces cerevisiae	32.16	8.00e-100	357.00
IUUC-Sha-107378	Sarcophilus harrisii	62.87	0.00e+00	868.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	33.97	5.00e-113	401.00
IUUC-Spo-108361	Schizosaccharomyces pombe	32.51	2.00e-106	379.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	29.43	2.00e-99	356.00
IUUC-Smo-109257	Selaginella moellendorffii	32.51	4.00e-101	362.00
IUUC-Sit-110258	Setaria italica	37.25	4.00e-147	515.00
IUUC-Sly-111521	Solanum lycopersicum	31.79	2.00e-107	382.00
IUUC-Stu-112718	Solanum tuberosum	48.57	3.00e-33	133.00
IUUC-Sar-113586	Sorex araneus	65.19	7.00e-39	154.00
IUUC-Sbi-114768	Sorghum bicolor	38.13	4.00e-151	528.00
IUUC-Sre-115159	Sporisorium reilianum	30.55	4.00e-60	226.00
IUUC-Ssc-116342	Sus scrofa	44.29	6.00e-146	511.00
IUUC-Tgu-117320	Taeniopygia guttata	64.30	0.00e+00	875.00
IUUC-Tru-118024	Takifugu rubripes	51.48	0.00e+00	712.00
IUUC-Tni-119971	Tetraodon nigroviridis	59.44	0.00e+00	876.00
IUUC-Tca-121248	Theobroma cacao	33.04	2.00e-115	410.00
IUUC-Tre-122079	Trichoderma reesei	30.59	8.00e-95	341.00
IUUC-Tvi-122554	Trichoderma virens	29.95	1.00e-91	330.00
IUUC-Tae-125865	Triticum aestivum	32.78	9.00e-113	400.00
IUUC-Tur-126436	Triticum urartu	35.25	1.00e-115	410.00
IUUC-Tme-126942	Tuber melanosporum	31.87	2.00e-94	340.00
IUUC-Tbe-128000	Tupaia belangeri	65.67	5.00e-50	192.00
IUUC-Ttr-128964	Tursiops truncatus	60.77	0.00e+00	898.00
IUUC-Uma-129473	Ustilago maydis	28.01	8.00e-63	235.00
IUUC-Vda-129749	Verticillium dahliae	29.31	1.00e-92	333.00
IUUC-Vvi-131511	Vitis vinifera	33.50	2.00e-109	390.00
IUUC-Xtr-132816	Xenopus tropicalis	57.79	0.00e+00	826.00
IUUC-Xma-133672	Xiphophorus maculatus	60.74	0.00e+00	901.00
IUUC-Yli-134602	Yarrowia lipolytica	34.86	4.00e-125	441.00
IUUC-Zma-135559	Zea mays	36.88	6.00e-145	508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence