iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099570

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTR_0002s24690g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s24690	POPTR_0002s24690.1	POPTR_0002s24690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.6	100	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++ +  +++ CgH+f++ C+          +++++CP+Cr
   Q: 100  CPICLCPLVE-EMSTKCGHIFCKACISDA------IKRQAKCPTCR 138
           ********88.456************555......8*********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSGQTQGVKS PPLRGYRRRK TVLDLNVPPI DGRDDEGTST TRIEPPQATN ETDKDRLCRL 60
LLLMLMLSTT TTTTSSNRRP ERLLRENVQT LPPKEPTFNC PICLCPLVEE MSTKCGHIFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGGCC AGACTCAGGG CGTGAAGAGT CCTCCTTTAA GAGGATATCG GCGAAGGAAG 60
ACCGTGCTGG ACTTAAACGT TCCTCCGATT GATGGAAGAG ATGACGAAGG GACTTCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0002s24690g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dno-030061	Dasypus novemcinctus	50.00	1.00e-08	53.90
IUUC-Eeu-034603	Erinaceus europaeus	35.06	1.00e-09	54.70
IUUC-Mdo-062968	Monodelphis domestica	35.00	1.00e-10	58.50
IUUC-Oba-075460	Oryza barthii	52.56	1.00e-19	89.40
IUUC-Ogu-078677	Oryza glumaepatula	52.56	1.00e-19	89.00
IUUC-Olo-080257	Oryza longistaminata	53.85	9.00e-20	89.70
IUUC-Oni-082671	Oryza nivara	52.56	1.00e-19	89.40
IUUC-Oru-084650	Oryza rufipogon	52.56	1.00e-19	89.40
IUUC-Pma-094118	Petromyzon marinus	44.93	4.00e-11	58.50
IUUC-Pca-100939	Procavia capensis	42.00	3.00e-08	52.40
IUUC-Sha-107487	Sarcophilus harrisii	35.00	1.00e-10	58.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence