iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074624

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02044169

Gene Name

POC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000002080.3	ENSOCUT00000002081.3	ENSOCUP00000001796.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-52	173.5	106	143
UBD/Beta-Prp	2.90e-77	259.8	2	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++
   Q: 106  HINWVRCARFsPDgRLIVSASDDKTVKLWDRSSRECVH 143
           999********999****************87777766 PP

UBD/Beta-Prp

   S: 31   dgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtir 119
           d+++ vw +++++   ++ gh+++vt+v+fsp+g +l++gs+D+t+++w ++      ++++h+++v+s++f+ +g++lv++s+d+t++
   Q: 2    DSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 90
           899**********************************************7775555667999*************************** PP
   S: 120  vwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
           vw ++ +  l   ls+h  +v+c++++pdg+l+vs+s+D+tv+lWd ++ ++++   + h + v+ ++f+++g++++++++d+tvk+wd
   Q: 91   VWSTHRQRFLF-SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDRSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 177
           **999999998.********************************************99.****************************** PP
   S: 209  lqtgecvrtlnghtdnv 225
           ++t + ++ ++ h++ v
   Q: 178  VRTHRLLQHYQLHSAAV 194
           ************99887 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MDSCLMVWHM KPQSRAYRFA GHKDAVTCVN FSPSGHLLAS GSRDKTVRIW VPNVKGESTV 60
FRAHTATVRS VHFCSDGQSL VTASDDKTVK VWSTHRQRFL FSLSQHINWV RCARFSPDGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGTGATGG TATTGTTTTA TTTTTTGGAT TACTCATTGC TAGTGTATGT AAAGAAATAC 60
AGTTGGTTTT TCTGTATTAA TTTTGTATCC TACAGCCTTG CTGAACTGGT TACTCTAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	91.87	0.00e+00	677.00
IUUC-Apl-003466	Anas platyrhynchos	75.75	4.00e-168	583.00
IUUC-Aca-004323	Anolis carolinensis	68.24	8.00e-161	559.00
IUUC-Bta-012484	Bos taurus	91.33	0.00e+00	707.00
IUUC-Cja-019067	Callithrix jacchus	91.13	0.00e+00	704.00
IUUC-Cfa-020439	Canis familiaris	91.87	0.00e+00	705.00
IUUC-Cpo-021403	Cavia porcellus	89.43	0.00e+00	701.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	51.10	4.00e-102	364.00
IUUC-Csa-023479	Chlorocebus sabaeus	91.87	0.00e+00	679.00
IUUC-Cho-024354	Choloepus hoffmanni	86.70	1.00e-95	342.00
IUUC-Cin-025258	Ciona intestinalis	74.91	1.00e-130	459.00
IUUC-Csv-025955	Ciona savignyi	64.75	9.00e-146	509.00
IUUC-Dor-030399	Dipodomys ordii	89.97	0.00e+00	694.00
IUUC-Eca-034425	Equus caballus	91.87	0.00e+00	677.00
IUUC-Eeu-034607	Erinaceus europaeus	79.40	2.00e-164	571.00
IUUC-Fca-035627	Felis catus	93.22	0.00e+00	699.00
IUUC-Fal-037381	Ficedula albicollis	73.17	5.00e-164	570.00
IUUC-Gmo-038489	Gadus morhua	66.14	1.00e-145	508.00
IUUC-Gga-040559	Gallus gallus	73.42	1.00e-160	559.00
IUUC-Gac-041453	Gasterosteus aculeatus	68.53	6.00e-155	540.00
IUUC-Ggo-044773	Gorilla gorilla	91.87	0.00e+00	676.00
IUUC-Hsa-045823	Homo sapiens	92.68	0.00e+00	684.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	91.33	0.00e+00	714.00
IUUC-Lch-050558	Latimeria chalumnae	68.67	6.00e-163	566.00
IUUC-Loc-052836	Lepisosteus oculatus	66.09	1.00e-159	556.00
IUUC-Laf-053974	Loxodonta africana	83.51	1.00e-178	618.00
IUUC-Mcc-055494	Macaca mulatta	89.84	0.00e+00	665.00
IUUC-Meu-056646	Macropus eugenii	75.78	3.00e-113	401.00
IUUC-Mga-059295	Meleagris gallopavo	66.67	4.00e-155	540.00
IUUC-Mmr-061040	Microcebus murinus	93.50	0.00e+00	721.00
IUUC-Mdo-062519	Monodelphis domestica	78.64	8.00e-164	569.00
IUUC-Mmu-063759	Mus musculus	93.55	2.00e-160	558.00
IUUC-Mpu-066442	Mustela putorius furo	91.60	0.00e+00	684.00
IUUC-Mlu-068163	Myotis lucifugus	91.33	0.00e+00	700.00
IUUC-Nle-070160	Nomascus leucogenys	91.33	0.00e+00	677.00
IUUC-Opr-070192	Ochotona princeps	95.39	0.00e+00	700.00
IUUC-Ont-072539	Oreochromis niloticus	69.52	1.00e-136	479.00
IUUC-Ola-087268	Oryzias latipes	61.73	5.00e-144	503.00
IUUC-Oga-088964	Otolemur garnettii	84.68	0.00e+00	658.00
IUUC-Oar-090202	Ovis aries	91.33	0.00e+00	677.00
IUUC-Ptr-091164	Pan troglodytes	92.68	0.00e+00	685.00
IUUC-Pan-092805	Papio anubis	91.87	0.00e+00	677.00
IUUC-Psi-093359	Pelodiscus sinensis	81.75	6.00e-146	509.00
IUUC-Pfo-096741	Poecilia formosa	58.82	2.00e-142	498.00
IUUC-Pab-098376	Pongo abelii	91.60	0.00e+00	714.00
IUUC-Pca-101122	Procavia capensis	89.16	0.00e+00	690.00
IUUC-Pva-103104	Pteropus vampyrus	71.00	7.00e-148	516.00
IUUC-Rno-105282	Rattus norvegicus	85.95	0.00e+00	651.00
IUUC-Sha-106840	Sarcophilus harrisii	81.16	2.00e-102	364.00
IUUC-Smo-108731	Selaginella moellendorffii	48.79	6.00e-74	270.00
IUUC-Sar-113262	Sorex araneus	72.70	2.00e-131	461.00
IUUC-Ssc-115392	Sus scrofa	92.26	5.00e-168	583.00
IUUC-Tgu-117340	Taeniopygia guttata	72.28	5.00e-160	556.00
IUUC-Tsy-119404	Tarsius syrichta	84.55	0.00e+00	646.00
IUUC-Tca-121051	Theobroma cacao	34.35	1.00e-39	156.00
IUUC-Tbe-127788	Tupaia belangeri	72.90	1.00e-154	539.00
IUUC-Ttr-128608	Tursiops truncatus	88.35	0.00e+00	647.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence