iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014289

UUCD1 version

UUC-BrD-01236

Ensembl Protein ID

BRADI1G32170.1

UniProt Accession

I1GVZ7; I1GVZ7_BRADI

Genbank Protein ID

KQK17040.1; KQK17041.1; KQK17042.1; KQK17044.1; KQK17046.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880; CM000880; CM000880; CM000880; CM000880

Gene Name

LOC100830906; BRADI_1g32170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G32170	BRADI1G32170.1	BRADI1G32170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-40	136.4	106	138
UBD/Beta-Prp	9.60e-94	314.4	58	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+d v+ +af sd +l+++Gs Dg+i vW++ 
   Q: 106  GHQDTVCTVAFsSDgKLVACGSMDGQINVWNTA 138
           8***********999****************75 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght 180
            ++++gh+d+v + + sp + + +vsG++d+   +w + ++  ++  l+gh+++v++v++++dg+l++ Gs D+++++W+ +t +l  tl+g   
   Q: 58   AYAFRGHTDEVFAAACSPiDASLVVSGGKDDRGFLWRIGSDVDVQ-ELTGHQDTVCTVAFSSDGKLVACGSMDGQINVWNTATRTLQGTLEGSSG 151
           589***************555************************.************************************************* PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           +  ++l +++ g  +++gs+d  v +w+  ++  ++t+ gh+++v++ +f+p+++ + sgs+D s+riWd +s +  +++ +h
   Q: 152  SGFEWLRWHPRGHLIIAGSEDCNVWMWNADHNAFLNTFAGHSSTVTCGDFTPDGKVICSGSDDASLRIWDPKSAQSRHVVRGH 234
           ***************************************************************************99998876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSISGEVPGE GSDGEEVFIN EEDIIQEIPI DEEDLPDQDD DDDDEEEDDR MDGVDDSAYA 60
FRGHTDEVFA AACSPIDASL VVSGGKDDRG FLWRIGSDVD VQELTGHQDT VCTVAFSSDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGAACCCA GGTTCCGTTG ATCCCCGCTT CACGGATTCC GTCTCTCATC TTCTCTCGTA 60
GGGATTCTTC TATTCAGCTG CGCTCACAGC ACCAGCGGCG GCGGCGATGA GTATCTCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

bdi:100830906

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	80.77	0.00e+00	653.00
IUUC-Aml-001781	Ailuropoda melanoleuca	34.93	8.00e-62	230.00
IUUC-Aca-004594	Anolis carolinensis	35.04	4.00e-57	214.00
IUUC-Ame-011651	Astyanax mexicanus	31.36	4.00e-49	187.00
IUUC-Bta-012833	Bos taurus	34.93	9.00e-61	226.00
IUUC-Cel-018305	Caenorhabditis elegans	24.80	1.00e-26	113.00
IUUC-Cja-019433	Callithrix jacchus	35.21	3.00e-61	228.00
IUUC-Cfa-020093	Canis familiaris	34.93	3.00e-62	231.00
IUUC-Cpo-021742	Cavia porcellus	34.93	6.00e-61	227.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	40.86	2.00e-69	255.00
IUUC-Csa-023498	Chlorocebus sabaeus	35.21	1.00e-61	229.00
IUUC-Cho-024628	Choloepus hoffmanni	34.39	8.00e-46	176.00
IUUC-Csv-026218	Ciona savignyi	32.76	6.00e-50	190.00
IUUC-Dre-028528	Danio rerio	35.26	2.00e-56	212.00
IUUC-Dno-029297	Dasypus novemcinctus	34.93	6.00e-61	227.00
IUUC-Dme-031587	Drosophila melanogaster	26.54	1.00e-31	130.00
IUUC-Eca-034277	Equus caballus	34.93	6.00e-61	227.00
IUUC-Eeu-035052	Erinaceus europaeus	32.82	2.00e-26	112.00
IUUC-Fca-036115	Felis catus	34.93	3.00e-62	231.00
IUUC-Fal-036864	Ficedula albicollis	34.93	4.00e-62	231.00
IUUC-Gga-040545	Gallus gallus	35.21	7.00e-63	233.00
IUUC-Ggo-045036	Gorilla gorilla	35.21	3.00e-61	228.00
IUUC-Hsa-046749	Homo sapiens	35.21	3.00e-61	228.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	35.21	4.00e-61	228.00
IUUC-Laf-053901	Loxodonta africana	34.93	8.00e-61	226.00
IUUC-Mcc-054990	Macaca mulatta	35.21	3.00e-61	228.00
IUUC-Meu-056844	Macropus eugenii	35.04	3.00e-58	218.00
IUUC-Mga-059749	Meleagris gallopavo	34.93	5.00e-62	230.00
IUUC-Mvi-060237	Microbotryum violaceum	32.04	2.00e-52	199.00
IUUC-Mmr-061270	Microcebus murinus	33.06	2.00e-57	215.00
IUUC-Mdo-062965	Monodelphis domestica	34.19	4.00e-59	221.00
IUUC-Mmu-064081	Mus musculus	35.49	9.00e-62	229.00
IUUC-Mpu-066355	Mustela putorius furo	34.93	4.00e-62	231.00
IUUC-Mlu-067630	Myotis lucifugus	33.99	1.00e-58	219.00
IUUC-Nle-069701	Nomascus leucogenys	35.21	2.00e-61	228.00
IUUC-Opr-070337	Ochotona princeps	32.39	8.00e-53	200.00
IUUC-Ocu-073912	Oryctolagus cuniculus	34.65	3.00e-60	224.00
IUUC-Oba-075195	Oryza barthii	77.27	2.00e-160	557.00
IUUC-Ogl-077318	Oryza glaberrima	81.06	3.00e-169	587.00
IUUC-Ogu-078579	Oryza glumaepatula	77.48	7.00e-166	575.00
IUUC-Oin-079340	Oryza indica	81.06	3.00e-169	587.00
IUUC-Olo-080813	Oryza longistaminata	77.72	1.00e-165	574.00
IUUC-Oni-082650	Oryza nivara	77.27	2.00e-160	557.00
IUUC-Oru-084207	Oryza rufipogon	77.27	2.00e-160	557.00
IUUC-Osa-085708	Oryza sativa	81.06	3.00e-169	587.00
IUUC-Oga-088864	Otolemur garnettii	34.93	6.00e-61	227.00
IUUC-Oar-090115	Ovis aries	34.65	2.00e-60	225.00
IUUC-Ptr-091398	Pan troglodytes	35.21	3.00e-61	228.00
IUUC-Pan-092002	Papio anubis	35.21	3.00e-61	228.00
IUUC-Psi-093979	Pelodiscus sinensis	37.87	6.00e-31	126.00
IUUC-Pma-094618	Petromyzon marinus	33.52	2.00e-53	201.00
IUUC-Ppa-095351	Physcomitrella patens	51.18	2.00e-102	365.00
IUUC-Pab-098540	Pongo abelii	35.21	2.00e-61	228.00
IUUC-Pva-102400	Pteropus vampyrus	29.86	3.00e-47	182.00
IUUC-Pgr-103362	Puccinia graminis	28.89	2.00e-45	176.00
IUUC-Ptt-103756	Puccinia triticina	31.80	3.00e-33	135.00
IUUC-Rno-105672	Rattus norvegicus	35.21	2.00e-61	228.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	30.46	3.00e-48	185.00
IUUC-Spo-108208	Schizosaccharomyces pombe	30.46	3.00e-51	194.00
IUUC-Sly-111316	Solanum lycopersicum	62.65	1.00e-126	445.00
IUUC-Stu-111956	Solanum tuberosum	62.35	2.00e-126	444.00
IUUC-Sre-115029	Sporisorium reilianum	35.48	2.00e-51	196.00
IUUC-Ssc-116045	Sus scrofa	32.29	3.00e-42	165.00
IUUC-Tgu-117514	Taeniopygia guttata	34.93	5.00e-63	234.00
IUUC-Tsy-119140	Tarsius syrichta	32.49	1.00e-52	199.00
IUUC-Tca-121686	Theobroma cacao	55.36	9.00e-112	395.00
IUUC-Tae-123208	Triticum aestivum	88.86	0.00e+00	672.00
IUUC-Tur-126174	Triticum urartu	86.58	0.00e+00	650.00
IUUC-Ttr-128182	Tursiops truncatus	34.93	1.00e-60	226.00
IUUC-Vpa-130605	Vicugna pacos	32.50	2.00e-46	178.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence