iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105077

Ensembl Protein ID

ENSRNOP00000065556.2

UniProt Accession

M0R7W8; M0R7W8_RAT

Genbank Protein ID

ENSRNOP00000065556

Protein Name

TNF receptor-associated factor 5

Genbank Nucleotide ID

AABR07022170

Gene Name

Traf5; LOC684173

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000047957.2	ENSRNOT00000071698.2	ENSRNOP00000065556.2

Annotation

Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	77.42	0.00e+00	916.00	IUUC-Hsa-046702

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAHSEEQAVV PCAFIRQNSG NSISLDFEPD TEYQFVEQLE ERYKCAFCHS VLHNPHQTGC 60
GHRFCQHCIL SLRELNSVPI CPVDKEVIKP QEVFKDNCCK REVLNLHVYC KNAPGCNARI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCATT CAGAGGAGCA AGCGGTTGTG CCCTGTGCCT TCATCCGCCA GAACTCTGGC 60
AACTCCATTT CCTTGGACTT TGAGCCCGAC ACAGAGTACC AATTTGTGGA GCAGCTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002083--MATH/TRAF_dom
IPR012227--TNF_rcpt--assoc_TRAF
IPR008974--TRAF-like
IPR027130--TRAF5
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS50144--MATH
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00097--zf-C3HC4
PF02176--zf-TRAF

SMART

SM00061--MATH
SM00184--RING

Gene Ontology

GO:0005813--C:centrosome
GO:0005829--C:cytosol
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0042981--P:regulation of apoptotic process
GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001288	Ailuropoda melanoleuca	79.96	0.00e+00	953.00
IUUC-Atr-003147	Amborella trichopoda	25.34	1.00e-08	53.90
IUUC-Aca-004687	Anolis carolinensis	63.62	0.00e+00	761.00
IUUC-Ath-007062	Arabidopsis thaliana	21.21	5.00e-07	49.70
IUUC-Acl-008349	Aspergillus clavatus	25.45	3.00e-17	82.80
IUUC-Afu-008782	Aspergillus fumigatus	25.19	7.00e-15	75.10
IUUC-Ani-009190	Aspergillus nidulans	27.60	6.00e-17	82.00
IUUC-Ang-009779	Aspergillus niger	25.51	2.00e-19	90.50
IUUC-Ate-010296	Aspergillus terreus	26.02	5.00e-19	89.00
IUUC-Bta-012558	Bos taurus	80.47	0.00e+00	950.00
IUUC-Bci-013998	Botrytis cinerea	24.14	3.00e-14	73.20
IUUC-Bdi-014466	Brachypodium distachyon	28.95	2.00e-07	50.10
IUUC-Bol-015913	Brassica oleracea	23.14	8.00e-09	55.50
IUUC-Bra-017948	Brassica rapa	22.96	3.00e-08	53.50
IUUC-Cja-019589	Callithrix jacchus	77.06	0.00e+00	915.00
IUUC-Cfa-020639	Canis familiaris	75.13	0.00e+00	867.00
IUUC-Cpo-021878	Cavia porcellus	80.47	0.00e+00	961.00
IUUC-Csa-024172	Chlorocebus sabaeus	78.32	0.00e+00	923.00
IUUC-Cho-024532	Choloepus hoffmanni	76.70	0.00e+00	910.00
IUUC-Cgl-026455	Colletotrichum gloeosporioides	26.38	8.00e-18	85.10
IUUC-Dno-029746	Dasypus novemcinctus	69.78	0.00e+00	718.00
IUUC-Dor-030469	Dipodomys ordii	78.85	0.00e+00	934.00
IUUC-Ete-032910	Echinops telfairi	74.91	0.00e+00	884.00
IUUC-Eca-033786	Equus caballus	80.47	0.00e+00	965.00
IUUC-Fca-036026	Felis catus	82.08	0.00e+00	968.00
IUUC-Fal-036842	Ficedula albicollis	67.69	0.00e+00	808.00
IUUC-Gga-040519	Gallus gallus	66.79	0.00e+00	805.00
IUUC-Ggo-044762	Gorilla gorilla	77.15	0.00e+00	921.00
IUUC-Hsa-046702	Homo sapiens	77.42	0.00e+00	916.00
IUUC-Itr-048986	Ictidomys tridecemlineatus	79.57	0.00e+00	931.00
IUUC-Lch-049962	Latimeria chalumnae	47.74	1.00e-146	513.00
IUUC-Lpe-051100	Leersia perrieri	30.34	3.00e-08	52.40
IUUC-Loc-052170	Lepisosteus oculatus	48.93	5.00e-166	577.00
IUUC-Laf-053476	Loxodonta africana	78.80	0.00e+00	727.00
IUUC-Mcc-054878	Macaca mulatta	78.14	0.00e+00	923.00
IUUC-Mga-060145	Meleagris gallopavo	66.79	0.00e+00	803.00
IUUC-Mmr-061719	Microcebus murinus	75.13	0.00e+00	845.00
IUUC-Mdo-063077	Monodelphis domestica	70.27	0.00e+00	852.00
IUUC-Mmu-064169	Mus musculus	88.28	0.00e+00	1030.00
IUUC-Mpu-065801	Mustela putorius furo	81.54	0.00e+00	959.00
IUUC-Mlu-067192	Myotis lucifugus	79.75	0.00e+00	944.00
IUUC-Nfi-068511	Neosartorya fischeri	26.94	4.00e-20	92.80
IUUC-Ncr-068632	Neurospora crassa	25.26	2.00e-18	87.80
IUUC-Nle-069250	Nomascus leucogenys	78.14	0.00e+00	922.00
IUUC-Opr-071122	Ochotona princeps	69.35	0.00e+00	796.00
IUUC-Oan-072905	Ornithorhynchus anatinus	70.45	0.00e+00	844.00
IUUC-Ocu-073755	Oryctolagus cuniculus	79.21	0.00e+00	936.00
IUUC-Oba-075263	Oryza barthii	29.14	2.00e-09	56.20
IUUC-Obr-076500	Oryza brachyantha	32.04	2.00e-09	56.60
IUUC-Ogl-077708	Oryza glaberrima	28.57	5.00e-09	55.10
IUUC-Ogu-078582	Oryza glumaepatula	28.57	5.00e-09	55.10
IUUC-Oin-079499	Oryza indica	28.90	7.00e-09	54.70
IUUC-Ome-081269	Oryza meridionalis	28.57	4.00e-09	55.50
IUUC-Oni-083040	Oryza nivara	30.77	1.00e-08	53.50
IUUC-Opu-083468	Oryza punctata	31.85	1.00e-08	53.50
IUUC-Oru-084662	Oryza rufipogon	28.43	6.00e-09	55.50
IUUC-Osa-085740	Oryza sativa	31.46	3.00e-08	52.40
IUUC-Ola-086783	Oryzias latipes	38.62	8.00e-106	377.00
IUUC-Oga-089077	Otolemur garnettii	75.13	0.00e+00	861.00
IUUC-Oar-090003	Ovis aries	76.80	0.00e+00	905.00
IUUC-Ptr-091465	Pan troglodytes	78.32	0.00e+00	926.00
IUUC-Pan-092301	Papio anubis	78.32	0.00e+00	924.00
IUUC-Psi-093956	Pelodiscus sinensis	66.55	0.00e+00	799.00
IUUC-Pab-097604	Pongo abelii	78.49	0.00e+00	929.00
IUUC-Pca-100433	Procavia capensis	67.08	0.00e+00	653.00
IUUC-Pva-102112	Pteropus vampyrus	81.18	0.00e+00	958.00
IUUC-Sha-107492	Sarcophilus harrisii	71.79	0.00e+00	859.00
IUUC-Ssl-108580	Sclerotinia sclerotiorum	22.32	9.00e-13	68.20
IUUC-Sit-109710	Setaria italica	30.30	1.00e-10	60.80
IUUC-Sbi-113900	Sorghum bicolor	29.32	6.00e-08	51.60
IUUC-Ssc-116427	Sus scrofa	80.11	0.00e+00	943.00
IUUC-Tgu-117408	Taeniopygia guttata	66.61	0.00e+00	792.00
IUUC-Tsy-119571	Tarsius syrichta	71.15	0.00e+00	817.00
IUUC-Tbe-127412	Tupaia belangeri	79.83	0.00e+00	799.00
IUUC-Ttr-128492	Tursiops truncatus	75.14	1.00e-164	572.00
IUUC-Vpa-130751	Vicugna pacos	70.11	0.00e+00	657.00
IUUC-Vvi-131070	Vitis vinifera	24.49	4.00e-07	48.90
IUUC-Xtr-132721	Xenopus tropicalis	55.03	0.00e+00	645.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence