iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg...plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ df+d    p++l  CgH+f+ +Cl  w       + +++CP Cr
   Q: 34   CSICFFDFDDFqhlPKLLEnCGHTFCYSCLFDW------LKSQDTCPMCR 77
           ****8777663222554447*************......**********8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MADVLIAAVQ YFSSVLPHPL RGVVSLEMAS RLECSICFFD FDDFQHLPKL LENCGHTFCY 60
SCLFDWLKSQ DTCPMCREAV NMTQEIPTNV EILAVFEKKK ANPECNCDDE SSVYYCPTCM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGATG TACTCATTGC AGCTGTGCAG TATTTCTCAT CAGTCTTGCC CCACCCGTTG 60
CGCGGTGTTG TCTCTCTAGA AATGGCCTCC CGCCTCGAAT GCTCAATTTG CTTCTTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

cel:CELE_Y47G6A.31

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-019151	Callithrix jacchus	30.86	7.00e-09	52.40
IUUC-Cre-022788	Chlamydomonas reinhardtii	38.46	1.00e-06	46.20
IUUC-Csa-024125	Chlorocebus sabaeus	33.33	4.00e-09	53.10
IUUC-Dno-029605	Dasypus novemcinctus	33.82	1.00e-08	51.60
IUUC-Dor-030830	Dipodomys ordii	36.00	3.00e-07	48.50
IUUC-Ete-032694	Echinops telfairi	33.87	4.00e-08	49.70
IUUC-Eeu-034603	Erinaceus europaeus	30.86	9.00e-09	50.80
IUUC-Ggo-044726	Gorilla gorilla	32.10	4.00e-09	53.10
IUUC-Hsa-046212	Homo sapiens	32.10	4.00e-09	53.10
IUUC-Itr-047892	Ictidomys tridecemlineatus	33.33	3.00e-09	53.50
IUUC-Kpa-049392	Komagataella pastoris	38.98	5.00e-07	47.00
IUUC-Laf-054145	Loxodonta africana	35.14	7.00e-09	52.40
IUUC-Mcc-055689	Macaca mulatta	33.33	4.00e-09	53.10
IUUC-Mmr-061355	Microcebus murinus	30.86	8.00e-09	52.00
IUUC-Ncr-068857	Neurospora crassa	32.69	7.00e-08	52.00
IUUC-Nle-069198	Nomascus leucogenys	32.10	4.00e-09	52.80
IUUC-Opr-071141	Ochotona princeps	33.33	1.00e-09	55.10
IUUC-Olu-087723	Ostreococcus lucimarinus	41.67	8.00e-07	47.80
IUUC-Oga-088242	Otolemur garnettii	30.86	1.00e-08	51.60
IUUC-Ptr-091254	Pan troglodytes	35.38	7.00e-09	52.40
IUUC-Pan-092919	Papio anubis	33.33	4.00e-09	53.10
IUUC-Pno-094961	Phaeosphaeria nodorum	27.04	3.00e-07	49.70
IUUC-Pfo-096986	Poecilia formosa	36.14	6.00e-10	57.40
IUUC-Pab-098424	Pongo abelii	32.10	4.00e-09	53.10
IUUC-Pva-102208	Pteropus vampyrus	34.12	8.00e-09	53.90
IUUC-Rno-105460	Rattus norvegicus	32.00	7.00e-09	52.40
IUUC-Ttr-128578	Tursiops truncatus	36.36	3.00e-08	52.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence