iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087424

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04054536

Gene Name

trim13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000011855.1	ENSORLT00000014854.1	ENSORLP00000014853.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-07	30.4	13	59

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw..pglknssskefrCPlCr 46
           C+iC++ f+d p+vl C H f+++Cl+++   ++  + ++  +CP+Cr
   Q: 13   CPICCSLFED-PRVLLCSHSFCKKCLEALveGNRGVVFRNPLKCPTCR 59
           **********.***************99988777777889999****8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

QGAMEGLEEE LTCPICCSLF EDPRVLLCSH SFCKKCLEAL VEGNRGVVFR NPLKCPTCRK 60
ETPHNGANSL QVNYSLRGIV EKYSKLKVKP RNSVCKQHCS HPLNIFCATD SKLICGICAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGAGCCA TGGAGGGGCT GGAAGAGGAG CTTACATGCC CGATCTGCTG CAGTCTGTTC 60
GAGGACCCAC GGGTGCTGCT CTGCTCCCAC AGCTTTTGCA AGAAGTGTTT GGAGGCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000315--Znf_B-box
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF00097--zf-C3HC4

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	49.29	2.00e-106	379.00
IUUC-Apl-004168	Anas platyrhynchos	59.74	1.00e-111	396.00
IUUC-Aca-004395	Anolis carolinensis	57.47	2.00e-105	375.00
IUUC-Ame-011325	Astyanax mexicanus	50.00	6.00e-66	244.00
IUUC-Bta-012613	Bos taurus	48.69	6.00e-106	377.00
IUUC-Bra-016897	Brassica rapa	40.91	1.00e-06	46.20
IUUC-Cja-018856	Callithrix jacchus	49.29	8.00e-111	393.00
IUUC-Cfa-021019	Canis familiaris	48.35	1.00e-104	372.00
IUUC-Cpo-021845	Cavia porcellus	50.12	1.00e-105	376.00
IUUC-Csa-023380	Chlorocebus sabaeus	48.69	4.00e-105	374.00
IUUC-Cho-024733	Choloepus hoffmanni	69.39	2.00e-36	146.00
IUUC-Dre-028675	Danio rerio	64.98	8.00e-118	416.00
IUUC-Dno-030018	Dasypus novemcinctus	49.17	5.00e-106	377.00
IUUC-Dor-030599	Dipodomys ordii	39.64	1.00e-46	179.00
IUUC-Ete-033134	Echinops telfairi	59.28	2.00e-109	388.00
IUUC-Eca-033931	Equus caballus	48.82	2.00e-106	379.00
IUUC-Eeu-034903	Erinaceus europaeus	48.10	5.00e-106	377.00
IUUC-Fca-035642	Felis catus	49.17	9.00e-106	376.00
IUUC-Fal-037108	Ficedula albicollis	58.20	1.00e-112	399.00
IUUC-Gga-040903	Gallus gallus	57.46	2.00e-109	389.00
IUUC-Gma-044149	Glycine max	31.53	1.00e-06	46.60
IUUC-Ggo-044635	Gorilla gorilla	48.58	8.00e-106	377.00
IUUC-Hsa-046345	Homo sapiens	48.82	1.00e-106	379.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	59.61	4.00e-105	374.00
IUUC-Lch-050599	Latimeria chalumnae	61.36	3.00e-112	398.00
IUUC-Loc-052378	Lepisosteus oculatus	61.51	4.00e-116	410.00
IUUC-Laf-053332	Loxodonta africana	50.12	1.00e-105	376.00
IUUC-Mcc-054705	Macaca mulatta	48.22	9.00e-106	376.00
IUUC-Meu-056825	Macropus eugenii	60.40	1.00e-109	389.00
IUUC-Mga-059528	Meleagris gallopavo	58.51	1.00e-113	402.00
IUUC-Mmr-060688	Microcebus murinus	48.82	5.00e-106	377.00
IUUC-Mdo-061882	Monodelphis domestica	59.35	2.00e-110	392.00
IUUC-Mmu-064352	Mus musculus	48.69	2.00e-110	392.00
IUUC-Mpu-066712	Mustela putorius furo	58.63	3.00e-104	371.00
IUUC-Mlu-068093	Myotis lucifugus	48.81	3.00e-105	375.00
IUUC-Nle-069310	Nomascus leucogenys	48.46	1.00e-105	376.00
IUUC-Ont-071759	Oreochromis niloticus	68.75	5.00e-149	520.00
IUUC-Oan-073673	Ornithorhynchus anatinus	58.06	2.00e-108	385.00
IUUC-Ocu-074192	Oryctolagus cuniculus	48.82	5.00e-105	374.00
IUUC-Oga-088808	Otolemur garnettii	47.74	8.00e-106	377.00
IUUC-Oar-089553	Ovis aries	48.34	1.00e-105	376.00
IUUC-Ptr-090518	Pan troglodytes	48.58	1.00e-105	376.00
IUUC-Pan-092781	Papio anubis	48.22	9.00e-106	376.00
IUUC-Psi-093914	Pelodiscus sinensis	58.95	9.00e-113	400.00
IUUC-Pfo-096346	Poecilia formosa	69.19	4.00e-159	554.00
IUUC-Pca-100914	Procavia capensis	49.76	1.00e-110	393.00
IUUC-Pva-102728	Pteropus vampyrus	49.53	3.00e-106	378.00
IUUC-Rno-105922	Rattus norvegicus	59.34	1.00e-104	372.00
IUUC-Sha-107124	Sarcophilus harrisii	58.99	2.00e-111	395.00
IUUC-Sar-113607	Sorex araneus	56.65	6.00e-103	367.00
IUUC-Ssc-116355	Sus scrofa	50.00	3.00e-107	381.00
IUUC-Tgu-116476	Taeniopygia guttata	58.51	3.00e-113	401.00
IUUC-Tru-118737	Takifugu rubripes	74.68	7.00e-142	496.00
IUUC-Tsy-118908	Tarsius syrichta	49.05	5.00e-107	380.00
IUUC-Tbe-127258	Tupaia belangeri	49.53	2.00e-107	382.00
IUUC-Vpa-130138	Vicugna pacos	48.82	1.00e-106	379.00
IUUC-Xtr-132100	Xenopus tropicalis	56.27	1.00e-105	376.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence