iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090754

Ensembl Protein ID

ENSPTRP00000049734.2

UniProt Accession

H2R708; H2R708_PANTR

Genbank Protein ID

JAA19220.1

Protein Name

Splicing factor 3a, subunit 1, 120kDa

Genbank Nucleotide ID

AACZ03125284

Gene Name

SF3A1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000014240.5	ENSPTRT00000056923.2	ENSPTRP00000049734.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.30e-17	61.2	707	790

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlk....v...npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           ++v+v++++++ e++l+    v   + +d+V+++K ki++++g+p+ +q+L+y+G+ ++d ++La+y++ +g +ihl +k++gg
   Q: 707  IKVQVPNMQDKtEWKLNgqvlVftlPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGG 790
           6899*************996516658888**************************************************99875 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MPAGPVQAVP PPPPVPTEPK QPTEEEASSK EDSAPSKPVV GIIYPPPEVR NIVDKTASFV 60
ARNGPEFEAR IRQNEINNPK FNFLNPNDPY HAYYRHKVSE FKEGKAQEPS AAIPKVMQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAACTCG CTCGGCCGCC GCCATCTTGC GAGCTCGTCG TACTGTCCGA GCGGGGAGGC 60
TGTCTTGAGG CGGCACCGCT CACCGACACC GAGGCGGACT GGCAGCCCTG AGCGTCGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0016607--C:nuclear speck
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	35.90	1.00e-48	187.00
IUUC-Aml-002416	Ailuropoda melanoleuca	98.70	0.00e+00	1135.00
IUUC-Atr-003001	Amborella trichopoda	48.57	5.00e-66	245.00
IUUC-Apl-003584	Anas platyrhynchos	93.39	0.00e+00	946.00
IUUC-Aca-004690	Anolis carolinensis	86.45	0.00e+00	1018.00
IUUC-Aly-005487	Arabidopsis lyrata	44.81	1.00e-55	211.00
IUUC-Ath-007275	Arabidopsis thaliana	44.77	1.00e-57	217.00
IUUC-Acl-008320	Aspergillus clavatus	43.21	9.00e-48	184.00
IUUC-Afl-008707	Aspergillus flavus	46.69	7.00e-58	218.00
IUUC-Afu-008786	Aspergillus fumigatus	41.11	1.00e-46	180.00
IUUC-Ani-009307	Aspergillus nidulans	44.25	1.00e-52	200.00
IUUC-Ang-009761	Aspergillus niger	46.34	1.00e-56	213.00
IUUC-Aor-010067	Aspergillus oryzae	46.69	7.00e-58	218.00
IUUC-Ate-010515	Aspergillus terreus	47.04	1.00e-57	217.00
IUUC-Ame-011842	Astyanax mexicanus	79.15	0.00e+00	1009.00
IUUC-Bgr-012204	Blumeria graminis	35.06	2.00e-65	243.00
IUUC-Bta-013525	Bos taurus	98.96	0.00e+00	1130.00
IUUC-Bci-013842	Botrytis cinerea	46.07	5.00e-50	192.00
IUUC-Bdi-014436	Brachypodium distachyon	35.81	1.00e-73	270.00
IUUC-Bol-015903	Brassica oleracea	44.11	2.00e-53	203.00
IUUC-Bra-017856	Brassica rapa	36.83	3.00e-56	213.00
IUUC-Cel-018261	Caenorhabditis elegans	50.69	2.00e-81	296.00
IUUC-Cja-018989	Callithrix jacchus	99.35	0.00e+00	1127.00
IUUC-Cfa-020629	Canis familiaris	98.69	0.00e+00	1126.00
IUUC-Cpo-021759	Cavia porcellus	98.57	0.00e+00	1117.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	38.93	1.00e-22	100.00
IUUC-Csa-023750	Chlorocebus sabaeus	99.74	0.00e+00	1130.00
IUUC-Cho-024581	Choloepus hoffmanni	98.15	5.00e-123	435.00
IUUC-Cin-025640	Ciona intestinalis	57.66	6.00e-148	518.00
IUUC-Csv-025855	Ciona savignyi	55.74	7.00e-143	501.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	42.27	6.00e-46	178.00
IUUC-Cne-026952	Cryptococcus neoformans	40.59	7.00e-50	192.00
IUUC-Dre-028055	Danio rerio	81.27	0.00e+00	981.00
IUUC-Dno-029259	Dasypus novemcinctus	98.70	0.00e+00	1130.00
IUUC-Dor-031081	Dipodomys ordii	98.44	0.00e+00	1125.00
IUUC-Dse-031438	Dothistroma septosporum	39.37	4.00e-48	186.00
IUUC-Dme-031975	Drosophila melanogaster	60.00	6.00e-148	518.00
IUUC-Ete-033177	Echinops telfairi	96.86	0.00e+00	895.00
IUUC-Eca-033670	Equus caballus	98.96	0.00e+00	1135.00
IUUC-Eeu-035100	Erinaceus europaeus	93.37	0.00e+00	698.00
IUUC-Fca-036176	Felis catus	98.69	0.00e+00	1127.00
IUUC-Fal-036776	Ficedula albicollis	92.31	0.00e+00	932.00
IUUC-Fox-037706	Fusarium oxysporum	40.83	6.00e-49	188.00
IUUC-Fso-038313	Fusarium solani	42.39	3.00e-45	176.00
IUUC-Gmo-038887	Gadus morhua	80.57	0.00e+00	998.00
IUUC-Ggr-039932	Gaeumannomyces graminis	38.02	9.00e-35	141.00
IUUC-Gga-041184	Gallus gallus	91.26	0.00e+00	926.00
IUUC-Gac-042118	Gasterosteus aculeatus	83.51	0.00e+00	981.00
IUUC-Gma-042726	Glycine max	39.53	2.00e-82	300.00
IUUC-Ggo-045641	Gorilla gorilla	97.00	0.00e+00	1115.00
IUUC-Hsa-045751	Homo sapiens	99.87	0.00e+00	1120.00
IUUC-Hvu-047702	Hordeum vulgare	32.84	9.00e-31	128.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	98.83	0.00e+00	1135.00
IUUC-Kpa-049400	Komagataella pastoris	29.31	5.00e-31	128.00
IUUC-Lch-050152	Latimeria chalumnae	85.66	0.00e+00	920.00
IUUC-Lpe-051570	Leersia perrieri	37.11	1.00e-51	197.00
IUUC-Loc-051753	Lepisosteus oculatus	83.77	0.00e+00	1028.00
IUUC-Lma-053219	Leptosphaeria maculans	36.58	1.00e-34	140.00
IUUC-Laf-053643	Loxodonta africana	98.83	0.00e+00	1095.00
IUUC-Mcc-055091	Macaca mulatta	99.61	0.00e+00	1130.00
IUUC-Meu-056036	Macropus eugenii	86.41	0.00e+00	799.00
IUUC-Mor-057214	Magnaporthe oryzae	37.36	5.00e-35	142.00
IUUC-Mpo-057385	Magnaporthe poae	30.00	1.00e-12	67.00
IUUC-Mtr-057954	Medicago truncatula	38.08	6.00e-82	298.00
IUUC-Mla-059020	Melampsora laricipopulina	36.42	7.00e-49	189.00
IUUC-Mga-060176	Meleagris gallopavo	92.59	0.00e+00	953.00
IUUC-Mvi-060278	Microbotryum violaceum	33.33	2.00e-74	273.00
IUUC-Mmr-061602	Microcebus murinus	99.35	0.00e+00	1154.00
IUUC-Mdo-062047	Monodelphis domestica	96.36	0.00e+00	1061.00
IUUC-Mmu-063377	Mus musculus	96.64	0.00e+00	1117.00
IUUC-Mac-065644	Musa acuminata	46.30	8.00e-61	228.00
IUUC-Mpu-066047	Mustela putorius furo	98.57	0.00e+00	1135.00
IUUC-Mlu-067039	Myotis lucifugus	98.70	0.00e+00	1102.00
IUUC-Nfi-068434	Neosartorya fischeri	45.96	3.00e-53	202.00
IUUC-Ncr-068912	Neurospora crassa	39.41	3.00e-39	156.00
IUUC-Nle-069540	Nomascus leucogenys	99.74	0.00e+00	1130.00
IUUC-Opr-071157	Ochotona princeps	98.31	0.00e+00	1108.00
IUUC-Ont-072229	Oreochromis niloticus	84.77	0.00e+00	988.00
IUUC-Oan-073616	Ornithorhynchus anatinus	98.23	3.00e-33	134.00
IUUC-Ocu-074002	Oryctolagus cuniculus	98.70	0.00e+00	1129.00
IUUC-Oba-075659	Oryza barthii	33.73	7.00e-35	141.00
IUUC-Obr-076465	Oryza brachyantha	46.25	6.00e-34	139.00
IUUC-Ogl-077461	Oryza glaberrima	37.08	2.00e-53	204.00
IUUC-Ogu-078515	Oryza glumaepatula	37.76	3.00e-53	203.00
IUUC-Oin-080201	Oryza indica	46.88	2.00e-33	137.00
IUUC-Olo-080751	Oryza longistaminata	33.73	7.00e-35	141.00
IUUC-Ome-081201	Oryza meridionalis	36.31	1.00e-74	274.00
IUUC-Oni-082951	Oryza nivara	46.88	2.00e-33	137.00
IUUC-Opu-083560	Oryza punctata	34.73	3.00e-64	239.00
IUUC-Oru-084440	Oryza rufipogon	37.08	2.00e-53	204.00
IUUC-Osa-085699	Oryza sativa	37.08	2.00e-53	204.00
IUUC-Ola-086705	Oryzias latipes	80.20	0.00e+00	960.00
IUUC-Olu-087794	Ostreococcus lucimarinus	36.48	8.00e-63	234.00
IUUC-Oga-088896	Otolemur garnettii	99.22	0.00e+00	1125.00
IUUC-Oar-090155	Ovis aries	94.39	0.00e+00	1095.00
IUUC-Pan-092464	Papio anubis	99.74	0.00e+00	1130.00
IUUC-Psi-093166	Pelodiscus sinensis	92.18	0.00e+00	737.00
IUUC-Pma-094280	Petromyzon marinus	85.04	1.00e-128	453.00
IUUC-Pno-095106	Phaeosphaeria nodorum	37.59	2.00e-31	130.00
IUUC-Ppa-095510	Physcomitrella patens	47.12	5.00e-57	216.00
IUUC-Pfo-096212	Poecilia formosa	77.69	0.00e+00	806.00
IUUC-Pab-098482	Pongo abelii	99.74	0.00e+00	1130.00
IUUC-Pop-099479	Populus trichocarpa	44.15	2.00e-56	213.00
IUUC-Pca-100776	Procavia capensis	99.50	4.00e-79	289.00
IUUC-Ppe-101595	Prunus persica	42.52	5.00e-59	222.00
IUUC-Pva-102981	Pteropus vampyrus	97.85	0.00e+00	1061.00
IUUC-Pgr-103503	Puccinia graminis	33.68	3.00e-69	256.00
IUUC-Ptt-103994	Puccinia triticina	39.31	8.00e-47	182.00
IUUC-Pte-104226	Pyrenophora teres	35.40	3.00e-36	145.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	36.24	5.00e-39	155.00
IUUC-Rno-105225	Rattus norvegicus	96.50	0.00e+00	1113.00
IUUC-Sce-106278	Saccharomyces cerevisiae	22.61	6.00e-11	61.20
IUUC-Sha-107353	Sarcophilus harrisii	94.11	0.00e+00	1004.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	35.78	3.00e-61	229.00
IUUC-Spo-108266	Schizosaccharomyces pombe	41.98	5.00e-52	198.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	45.74	3.00e-54	206.00
IUUC-Smo-109675	Selaginella moellendorffii	45.00	1.00e-51	197.00
IUUC-Sit-110019	Setaria italica	36.22	4.00e-51	196.00
IUUC-Sly-111621	Solanum lycopersicum	45.65	3.00e-63	236.00
IUUC-Stu-112703	Solanum tuberosum	46.35	1.00e-63	238.00
IUUC-Sar-113166	Sorex araneus	95.34	0.00e+00	1046.00
IUUC-Sbi-114746	Sorghum bicolor	35.96	2.00e-52	201.00
IUUC-Sre-115196	Sporisorium reilianum	40.27	1.00e-50	194.00
IUUC-Ssc-115573	Sus scrofa	98.83	0.00e+00	1130.00
IUUC-Tgu-117284	Taeniopygia guttata	93.27	0.00e+00	939.00
IUUC-Tru-118236	Takifugu rubripes	77.24	0.00e+00	922.00
IUUC-Tsy-119219	Tarsius syrichta	95.81	0.00e+00	1011.00
IUUC-Tni-119929	Tetraodon nigroviridis	84.76	2.00e-101	363.00
IUUC-Tca-121156	Theobroma cacao	44.59	3.00e-61	230.00
IUUC-Tre-122179	Trichoderma reesei	42.24	1.00e-44	174.00
IUUC-Tvi-122326	Trichoderma virens	40.85	1.00e-47	184.00
IUUC-Tae-124733	Triticum aestivum	34.87	9.00e-71	261.00
IUUC-Tur-126352	Triticum urartu	35.49	4.00e-49	189.00
IUUC-Tme-126996	Tuber melanosporum	42.80	1.00e-51	197.00
IUUC-Tbe-127271	Tupaia belangeri	91.31	0.00e+00	986.00
IUUC-Ttr-128433	Tursiops truncatus	96.87	0.00e+00	1122.00
IUUC-Uma-129357	Ustilago maydis	31.08	2.00e-47	184.00
IUUC-Vda-130010	Verticillium dahliae	40.50	2.00e-42	167.00
IUUC-Vvi-131734	Vitis vinifera	46.29	3.00e-63	236.00
IUUC-Xtr-132013	Xenopus tropicalis	86.62	0.00e+00	1003.00
IUUC-Xma-134244	Xiphophorus maculatus	80.72	0.00e+00	931.00
IUUC-Yli-134579	Yarrowia lipolytica	36.29	2.00e-32	133.00
IUUC-Zma-135600	Zea mays	35.96	1.00e-51	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence