iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115937

Ensembl Protein ID

ENSSSCP00000007753.2

UniProt Accession

D2KQR0; D2KQR0_PIG

Genbank Protein ID

ADA55473.1

Protein Name

Microtubule-associated protein 1 light chain 3 alpha

Genbank Nucleotide ID

CU606894

Gene Name

MAP1LC3A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007281.2	ENSSSCT00000007966.2	ENSSSCP00000007753.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/ATG8	2.00e-50	169.5	15	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/ATG8

   S: 1    krkeevekirdkfpdkiPvivekakkeki.peldkkkylvPsdltvgqlvkiirkrlqlraedalfllvnn.slvsvsatlaeiyeeek 87
           +r++ev++ird++p+kiPvi+e++k+ek+ p+ldk+k+lvP+++++++lvkiir+rlql++++a+fllvn+ s+vsvs+++a+iye+ek
   Q: 15   DRRKEVQQIRDQHPSKIPVIIERYKGEKQlPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQhSMVSVSTPIADIYEQEK 103
           699*************************99*********************************************************** PP
   S: 88   dedgflyvayaseetfG 104
           dedgfly++yas+etfG
   Q: 104  DEDGFLYMVYASQETFG 120
           ****************9 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MPSDRPFKQR RSFADRRKEV QQIRDQHPSK IPVIIERYKG EKQLPVLDKT KFLVPDHVNM 60
SELVKIIRRR LQLNPTQAFF LLVNQHSMVS VSTPIADIYE QEKDEDGFLY MVYASQETFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCAGGAT GAAGACTTCT GGTTCACTGT TGTCATCCCC AATGCCTCAT ACGGTCCCTG 60
GAACAGAAAA GACTCTGAGC GAGGGCTGTC TGACGCCTTG GTTACAGTGG AAACAGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom

Pfam

PF02991--Atg8

Gene Ontology

GO:0044754--C:autolysosome
GO:0000421--C:autophagosome membrane
GO:0005829--C:cytosol
GO:0008429--F:phosphatidylethanolamine binding
GO:0000045--P:autophagosome assembly
GO:0000422--P:mitophagy

KEGG

ssc:100322893

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001444	Ailuropoda melanoleuca	97.27	2.00e-59	219.00
IUUC-Apl-003457	Anas platyrhynchos	86.67	3.00e-58	216.00
IUUC-Aca-004647	Anolis carolinensis	94.21	9.00e-65	237.00
IUUC-Ame-010918	Astyanax mexicanus	95.00	1.00e-64	236.00
IUUC-Bta-012939	Bos taurus	98.35	1.00e-66	244.00
IUUC-Cel-018533	Caenorhabditis elegans	59.65	6.00e-36	142.00
IUUC-Cja-018774	Callithrix jacchus	98.15	7.00e-59	218.00
IUUC-Cfa-020676	Canis familiaris	97.50	1.00e-65	241.00
IUUC-Cpo-022407	Cavia porcellus	99.17	3.00e-67	245.00
IUUC-Csa-023226	Chlorocebus sabaeus	99.17	3.00e-67	245.00
IUUC-Cin-025249	Ciona intestinalis	76.67	8.00e-53	197.00
IUUC-Dre-027607	Danio rerio	95.00	1.00e-64	236.00
IUUC-Dno-029031	Dasypus novemcinctus	99.17	3.00e-67	245.00
IUUC-Ete-032915	Echinops telfairi	99.07	1.00e-58	217.00
IUUC-Eca-033844	Equus caballus	97.27	3.00e-59	219.00
IUUC-Eeu-034695	Erinaceus europaeus	98.13	3.00e-58	216.00
IUUC-Fca-035743	Felis catus	95.16	1.00e-64	237.00
IUUC-Fal-036789	Ficedula albicollis	95.37	1.00e-57	214.00
IUUC-Gmo-039473	Gadus morhua	94.17	2.00e-64	236.00
IUUC-Gga-040489	Gallus gallus	94.21	6.00e-65	238.00
IUUC-Gac-041849	Gasterosteus aculeatus	94.17	5.00e-64	235.00
IUUC-Ggo-044780	Gorilla gorilla	99.07	3.00e-59	219.00
IUUC-Hsa-046055	Homo sapiens	99.17	3.00e-67	245.00
IUUC-Itr-048837	Ictidomys tridecemlineatus	99.17	3.00e-67	246.00
IUUC-Lch-050578	Latimeria chalumnae	90.00	3.00e-61	226.00
IUUC-Loc-052008	Lepisosteus oculatus	95.83	3.00e-65	239.00
IUUC-Laf-054392	Loxodonta africana	90.83	7.00e-59	218.00
IUUC-Mcc-055894	Macaca mulatta	99.07	2.00e-59	219.00
IUUC-Mga-059593	Meleagris gallopavo	94.44	2.00e-57	212.00
IUUC-Mmr-061787	Microcebus murinus	99.17	3.00e-67	245.00
IUUC-Mdo-062276	Monodelphis domestica	96.69	6.00e-66	241.00
IUUC-Mmu-063357	Mus musculus	99.17	3.00e-67	245.00
IUUC-Mpu-065740	Mustela putorius furo	97.52	2.00e-66	244.00
IUUC-Mlu-067688	Myotis lucifugus	98.35	1.00e-66	244.00
IUUC-Nle-069441	Nomascus leucogenys	99.07	3.00e-59	219.00
IUUC-Opr-071159	Ochotona princeps	99.07	1.00e-58	217.00
IUUC-Ont-071272	Oreochromis niloticus	94.17	2.00e-64	236.00
IUUC-Ola-087353	Oryzias latipes	92.50	3.00e-63	233.00
IUUC-Oga-088213	Otolemur garnettii	99.17	3.00e-67	245.00
IUUC-Oar-089438	Ovis aries	92.44	5.00e-60	221.00
IUUC-Ptr-090906	Pan troglodytes	99.07	3.00e-59	219.00
IUUC-Pan-091989	Papio anubis	99.07	2.00e-59	220.00
IUUC-Psi-093576	Pelodiscus sinensis	90.16	2.00e-59	219.00
IUUC-Pfo-097503	Poecilia formosa	94.17	3.00e-64	236.00
IUUC-Pab-098040	Pongo abelii	99.17	3.00e-67	245.00
IUUC-Rno-104943	Rattus norvegicus	99.17	3.00e-67	245.00
IUUC-Tgu-116715	Taeniopygia guttata	94.50	6.00e-57	211.00
IUUC-Tru-117554	Takifugu rubripes	94.39	2.00e-56	209.00
IUUC-Tni-120190	Tetraodon nigroviridis	90.83	4.00e-62	228.00
IUUC-Vpa-130194	Vicugna pacos	96.26	2.00e-56	209.00
IUUC-Xtr-132257	Xenopus tropicalis	91.67	4.00e-62	229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence