iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120911

Ensembl Protein ID

EOY20123

UniProt Accession

A0A061FT40; A0A061FT40_THECC

Genbank Protein ID

EOY20123.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_045522

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_045522	EOY20123	EOY20123

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.60e-07	30.3	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f   ++ ++vlp C H fh  C+  w         + +CP+Cr
   Q: 113  CPICLGEFidgER-VRVLPkCHHGFHVRCIDTW------LLSHSSCPTCR 155
           ********66555.*******************......888999****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVTHYHSPHR LLLDTQSSAS PTNGNRTRSS FSNEANFDTN MVIILAALLC ALICALGLNS 60
IVRCALRCSR RFAFETPDET AARLAATGLK KRALRQIPVA IYSSGINIKA TDCPICLGEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTATTTCC CTCAACCACA CATCCTTGCA TAGCAAGCTG AGACAGGGAA GTTGAAGCAA 60
ACAAGCAAAG GATTTAGTTT TTTCAGCCAA TGAGAGAGAT GAATTCTCTT CTTTCAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000754	Aegilops tauschii	63.01	1.00e-25	107.00
IUUC-Aly-005951	Arabidopsis lyrata	60.48	1.00e-41	161.00
IUUC-Ath-007408	Arabidopsis thaliana	61.59	2.00e-36	144.00
IUUC-Ame-011764	Astyanax mexicanus	46.15	2.00e-13	70.50
IUUC-Bol-015294	Brassica oleracea	63.25	2.00e-40	157.00
IUUC-Bra-016992	Brassica rapa	63.86	7.00e-41	159.00
IUUC-Dre-027786	Danio rerio	39.33	1.00e-15	77.00
IUUC-Dme-032121	Drosophila melanogaster	43.59	1.00e-11	61.60
IUUC-Fal-037147	Ficedula albicollis	55.10	6.00e-13	68.90
IUUC-Gmo-039099	Gadus morhua	47.06	1.00e-14	73.60
IUUC-Gma-043926	Glycine max	75.69	8.00e-65	238.00
IUUC-Loc-051830	Lepisosteus oculatus	47.69	7.00e-14	72.00
IUUC-Mtr-058744	Medicago truncatula	69.05	1.00e-54	204.00
IUUC-Mac-064889	Musa acuminata	71.43	2.00e-53	200.00
IUUC-Ont-072483	Oreochromis niloticus	48.53	3.00e-15	77.00
IUUC-Oba-075992	Oryza barthii	58.16	4.00e-35	140.00
IUUC-Ogl-077735	Oryza glaberrima	57.64	5.00e-35	139.00
IUUC-Ogu-078127	Oryza glumaepatula	57.45	1.00e-34	139.00
IUUC-Oin-079621	Oryza indica	65.28	3.00e-26	110.00
IUUC-Ome-081946	Oryza meridionalis	57.64	7.00e-35	140.00
IUUC-Oni-083084	Oryza nivara	58.16	3.00e-35	141.00
IUUC-Opu-084141	Oryza punctata	60.77	9.00e-34	136.00
IUUC-Oru-084596	Oryza rufipogon	58.16	2.00e-35	141.00
IUUC-Osa-085865	Oryza sativa	57.64	4.00e-35	140.00
IUUC-Ppa-095328	Physcomitrella patens	41.03	9.00e-24	102.00
IUUC-Pfo-096917	Poecilia formosa	41.11	4.00e-16	79.30
IUUC-Pop-099640	Populus trichocarpa	76.19	3.00e-71	260.00
IUUC-Ppe-101375	Prunus persica	73.33	6.00e-65	239.00
IUUC-Pte-104409	Pyrenophora teres	58.82	1.00e-10	60.80
IUUC-Smo-109408	Selaginella moellendorffii	52.00	3.00e-19	87.80
IUUC-Sly-111371	Solanum lycopersicum	70.69	2.00e-60	224.00
IUUC-Stu-112741	Solanum tuberosum	70.11	4.00e-61	226.00
IUUC-Tru-118502	Takifugu rubripes	45.31	6.00e-13	68.90
IUUC-Tni-120344	Tetraodon nigroviridis	44.12	6.00e-14	71.60
IUUC-Tur-126629	Triticum urartu	64.63	2.00e-28	116.00
IUUC-Vvi-130980	Vitis vinifera	75.26	7.00e-75	271.00
IUUC-Xtr-132280	Xenopus tropicalis	55.32	7.00e-12	65.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence